FFCP PHASE1:Hg19::chr10:88854665..88854699,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:88854665..88854699,-
|short_description=p3@GLUD1
|description=CAGE_peak_3_at_GLUD1_5end
|association_with_transcript=-38bp_to_ENST00000513510_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2746 | |EntrezGene=2746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4335 | |HGNC=4335 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYQ4 | |UniProt=F5GYQ4 | ||
|association_with_transcript=-38bp_to_ENST00000513510_5end | |||
|cluster_id=chr10:88854665..88854699,- | |||
|description=CAGE_peak_3_at_GLUD1_5end | |||
|id=chr10:88854665..88854699,- | |||
|ontology_enrichment_celltype=CL:0000055!2.15e-14!180;CL:0000187!3.06e-10!54;CL:0000680!6.01e-10!57;CL:0000056!6.01e-10!57;CL:0000355!6.01e-10!57;CL:0000192!8.38e-10!42;CL:0000514!8.38e-10!42;CL:0000183!3.19e-09!59;CL:0000359!3.33e-08!32;CL:0000057!4.52e-08!75;CL:0000393!1.98e-07!60;CL:0000211!1.98e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.63e-08;32!CL:0000192;1.36e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.62e-10,55;CL:0000680,3.21e-10,58;CL:0000056,3.21e-10,58;CL:0000355,3.21e-10,58;CL:0000192,4.39e-10,43;CL:0000514,4.39e-10,43;CL:0000057,3.56e-08,76;CL:0000359,3.69e-08,32;CL:0000393,1.29e-07,61;CL:0000211,1.29e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.36e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.59e-12!83;UBERON:0002329!4.59e-12!83;UBERON:0003077!4.59e-12!83;UBERON:0003059!4.59e-12!83;UBERON:0007282!4.59e-12!83;UBERON:0009618!4.59e-12!83;UBERON:0007285!4.59e-12!83;UBERON:0004290!1.99e-11!70;UBERON:0000486!7.27e-11!82;UBERON:0000475!2.87e-10!365;UBERON:0002385!4.72e-10!63;UBERON:0001015!4.72e-10!63;UBERON:0000383!4.72e-10!63;UBERON:0001134!2.59e-09!61;UBERON:0002036!2.59e-09!61;UBERON:0003082!2.59e-09!61;UBERON:0003102!5.39e-08!95;UBERON:0000468!8.47e-08!659;UBERON:0002199!3.51e-07!45;UBERON:0002416!3.51e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.96e-12,73;UBERON:0003077,4.48e-12,72;UBERON:0007285,4.48e-12,72;UBERON:0002329,1.02e-11,71;UBERON:0003059,1.02e-11,71;UBERON:0007282,1.02e-11,71;UBERON:0004290,1.02e-11,71;UBERON:0009618,1.02e-11,71;UBERON:0000486,3.48e-11,83;UBERON:0002385,2.45e-10,64;UBERON:0001015,2.45e-10,64;UBERON:0000383,2.45e-10,64;UBERON:0001134,1.36e-09,62;UBERON:0002036,1.36e-09,62;UBERON:0003082,1.36e-09,62;UBERON:0007503,1.23e-08,78;UBERON:0003102,9.95e-08,99;UBERON:0002199,1.40e-07,46;UBERON:0002416,1.40e-07,46;UBERON:0010314,1.74e-07,132 | |||
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| ||
|short_description=p3@GLUD1 | |||
}} | }} |
Latest revision as of 18:29, 19 September 2015
Short description: | p3@GLUD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLUD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000513510_5end |
EntrezGene: | GLUD1 |
HGNC: | 4335 |
UniProt: | F5GYQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.62e-10 | 55 |
muscle precursor cell | 3.21e-10 | 58 |
myoblast | 3.21e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.21e-10 | 58 |
smooth muscle cell | 4.39e-10 | 43 |
smooth muscle myoblast | 4.39e-10 | 43 |
fibroblast | 3.56e-08 | 76 |
vascular associated smooth muscle cell | 3.69e-08 | 32 |
electrically responsive cell | 1.29e-07 | 61 |
electrically active cell | 1.29e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.96e-12 | 73 |
paraxial mesoderm | 4.48e-12 | 72 |
presumptive paraxial mesoderm | 4.48e-12 | 72 |
somite | 1.02e-11 | 71 |
presomitic mesoderm | 1.02e-11 | 71 |
presumptive segmental plate | 1.02e-11 | 71 |
dermomyotome | 1.02e-11 | 71 |
trunk paraxial mesoderm | 1.02e-11 | 71 |
multilaminar epithelium | 3.48e-11 | 83 |
muscle tissue | 2.45e-10 | 64 |
musculature | 2.45e-10 | 64 |
musculature of body | 2.45e-10 | 64 |
skeletal muscle tissue | 1.36e-09 | 62 |
striated muscle tissue | 1.36e-09 | 62 |
myotome | 1.36e-09 | 62 |
epithelial vesicle | 1.23e-08 | 78 |
surface structure | 9.95e-08 | 99 |
integument | 1.40e-07 | 46 |
integumental system | 1.40e-07 | 46 |
structure with developmental contribution from neural crest | 1.74e-07 | 132 |