FFCP PHASE1:Hg19::chr17:56408243..56408251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:56408243..56408251,+ | |||
|description=CAGE_peak_at_chr17:56408243..56408251,+ | |description=CAGE_peak_at_chr17:56408243..56408251,+ | ||
|id=chr17:56408243..56408251,+ | |id=chr17:56408243..56408251,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.33e-65!182;CL:0000037!1.91e-65!172;CL:0000566!1.91e-65!172;CL:0002032!6.21e-64!165;CL:0000837!6.21e-64!165;CL:0002031!9.78e-56!124;CL:0002087!2.42e-55!119;CL:0000738!2.97e-55!140;CL:0000542!2.96e-40!53;CL:0000051!2.96e-40!53;CL:0000838!6.15e-39!52;CL:0000763!3.64e-25!112;CL:0000049!3.64e-25!112;CL:0000084!2.11e-19!25;CL:0000827!2.11e-19!25;CL:0000839!4.14e-18!70;CL:0000134!4.52e-18!358;CL:0002009!8.30e-18!65;CL:0002320!2.98e-17!365;CL:0002194!3.07e-17!63;CL:0000576!3.07e-17!63;CL:0000040!3.07e-17!63;CL:0000559!3.07e-17!63;CL:0000766!4.07e-17!76;CL:0000945!9.06e-17!24;CL:0000826!9.06e-17!24;CL:0000557!1.35e-16!71;CL:0002057!2.43e-16!42;CL:0000791!2.14e-15!18;CL:0000789!2.14e-15!18;CL:0002420!2.14e-15!18;CL:0002419!2.14e-15!18;CL:0000790!2.14e-15!18;CL:0000860!8.80e-15!45;CL:0000219!2.19e-14!390;CL:0000625!2.77e-14!11;CL:0000236!2.17e-11!14;CL:0000048!5.05e-11!430;CL:0000723!1.49e-10!436;CL:0000034!1.63e-10!444 | |ontology_enrichment_celltype=CL:0000988!1.33e-65!182;CL:0000037!1.91e-65!172;CL:0000566!1.91e-65!172;CL:0002032!6.21e-64!165;CL:0000837!6.21e-64!165;CL:0002031!9.78e-56!124;CL:0002087!2.42e-55!119;CL:0000738!2.97e-55!140;CL:0000542!2.96e-40!53;CL:0000051!2.96e-40!53;CL:0000838!6.15e-39!52;CL:0000763!3.64e-25!112;CL:0000049!3.64e-25!112;CL:0000084!2.11e-19!25;CL:0000827!2.11e-19!25;CL:0000839!4.14e-18!70;CL:0000134!4.52e-18!358;CL:0002009!8.30e-18!65;CL:0002320!2.98e-17!365;CL:0002194!3.07e-17!63;CL:0000576!3.07e-17!63;CL:0000040!3.07e-17!63;CL:0000559!3.07e-17!63;CL:0000766!4.07e-17!76;CL:0000945!9.06e-17!24;CL:0000826!9.06e-17!24;CL:0000557!1.35e-16!71;CL:0002057!2.43e-16!42;CL:0000791!2.14e-15!18;CL:0000789!2.14e-15!18;CL:0002420!2.14e-15!18;CL:0002419!2.14e-15!18;CL:0000790!2.14e-15!18;CL:0000860!8.80e-15!45;CL:0000219!2.19e-14!390;CL:0000625!2.77e-14!11;CL:0000236!2.17e-11!14;CL:0000048!5.05e-11!430;CL:0000723!1.49e-10!436;CL:0000034!1.63e-10!444 | ||
|ontology_enrichment_celltype_v019=CL:0000542;8.20e-17;53!CL:0000945;8.97e-16;24!CL:0000236;6.88e-14;13!CL:0000084;1.01e-11;25!CL:0000625;2.41e-11;11!CL:0000791;1.55e-09;18!CL:0000789;1.55e-09;18!CL:0002419;1.55e-09;18!CL:0000875;1.09e-07;3!CL:0002396;1.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.83e-24,52;CL:0000542,6.27e-24,53;CL:0000051,6.27e-24,53;CL:0002087,1.04e-21,115;CL:0002031,1.39e-20,120;CL:0000738,3.10e-19,136;CL:0000037,2.51e-17,168;CL:0002032,8.77e-17,161;CL:0000837,8.77e-17,161;CL:0000988,3.83e-16,177;CL:0000945,8.01e-16,24;CL:0000826,8.01e-16,24;CL:0000236,4.96e-13,14;CL:0000084,9.56e-12,25;CL:0000827,9.56e-12,25;CL:0000625,1.87e-11,11;CL:0000791,1.43e-09,18;CL:0000789,1.43e-09,18;CL:0002420,1.43e-09,18;CL:0002419,1.43e-09,18;CL:0000790,1.43e-09,18;CL:0000875,9.55e-08,3;CL:0002396,9.55e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;8.20e-17;53!CL:0000790;1.55e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!2.63e-20!51;DOID:0060083!2.63e-20!51;DOID:0060058!1.93e-15!10;DOID:1240!3.64e-11!39;DOID:8692!9.57e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.82e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.70e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.19e-25!102;UBERON:0003061!9.19e-25!102;UBERON:0002193!2.77e-21!112;UBERON:0002384!3.88e-16!375;UBERON:0002371!6.37e-16!80;UBERON:0001474!4.01e-14!86;UBERON:0004765!1.29e-10!101;UBERON:0001434!1.29e-10!101;UBERON:0002405!2.49e-10!115;UBERON:0000178!4.26e-10!15;UBERON:0000179!4.26e-10!15;UBERON:0000463!4.26e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.17e-08;15!UBERON:0000179;3.17e-08;15!UBERON:0000463;3.17e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.49e-08,15;UBERON:0000179,3.49e-08,15;UBERON:0000463,3.49e-08,15;UBERON:0002390,4.55e-08,98;UBERON:0003061,4.55e-08,98;UBERON:0002193,4.71e-07,108 | |||
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| ||
|short_description=p@chr17:56408243..56408251,+ | |short_description=p@chr17:56408243..56408251,+ | ||
}} | }} |
Latest revision as of 19:17, 25 July 2015
Short description: | p@chr17:56408243..56408251, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56408243..56408251, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.83e-24 | 52 |
lymphocyte | 6.27e-24 | 53 |
common lymphoid progenitor | 6.27e-24 | 53 |
nongranular leukocyte | 1.04e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.39e-20 | 120 |
leukocyte | 3.10e-19 | 136 |
hematopoietic stem cell | 2.51e-17 | 168 |
hematopoietic oligopotent progenitor cell | 8.77e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.77e-17 | 161 |
hematopoietic cell | 3.83e-16 | 177 |
lymphocyte of B lineage | 8.01e-16 | 24 |
pro-B cell | 8.01e-16 | 24 |
B cell | 4.96e-13 | 14 |
T cell | 9.56e-12 | 25 |
pro-T cell | 9.56e-12 | 25 |
CD8-positive, alpha-beta T cell | 1.87e-11 | 11 |
mature alpha-beta T cell | 1.43e-09 | 18 |
alpha-beta T cell | 1.43e-09 | 18 |
immature T cell | 1.43e-09 | 18 |
mature T cell | 1.43e-09 | 18 |
immature alpha-beta T cell | 1.43e-09 | 18 |
non-classical monocyte | 9.55e-08 | 3 |
CD14-low, CD16-positive monocyte | 9.55e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.49e-08 | 15 |
haemolymphatic fluid | 3.49e-08 | 15 |
organism substance | 3.49e-08 | 15 |
hematopoietic system | 4.55e-08 | 98 |
blood island | 4.55e-08 | 98 |
hemolymphoid system | 4.71e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.70e-12 | 10 |