FFCP PHASE1:Hg19::chr12:54389698..54389714,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_BC044251_5end | |association_with_transcript=-15bp_to_BC044251_5end | ||
|cluster_id=chr12:54389698..54389714,- | |||
|description=CAGE_peak_1_at_BC044251_5end | |description=CAGE_peak_1_at_BC044251_5end | ||
|id=chr12:54389698..54389714,- | |id=chr12:54389698..54389714,- | ||
|ontology_enrichment_celltype=CL:0002570!1.90e-07!8;CL:1000507!2.60e-07!12;CL:1000494!2.60e-07!12;CL:1000497!9.58e-07!18;CL:0002518!9.58e-07!18 | |ontology_enrichment_celltype=CL:0002570!1.90e-07!8;CL:1000507!2.60e-07!12;CL:1000494!2.60e-07!12;CL:1000497!9.58e-07!18;CL:0002518!9.58e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;5.79e-13;10!CL:1000494;5.79e-13;10!CL:0002564;5.64e-10;3!CL:0002567;1.23e-09;3!CL:1000449;2.72e-08;15!CL:0000188;8.29e-08;9!CL:0002554;1.65e-07;2!CL:1000497;3.40e-07;17!CL:0002518;3.40e-07;17!CL:0000650;7.61e-07;2!CL:1000500;7.61e-07;2!CL:1000618;7.61e-07;2!CL:1001318;7.61e-07;2!CL:0002173;7.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.53e-13,10;CL:1000494,5.53e-13,10;CL:0002567,7.53e-10,3;CL:0002564,8.99e-10,3;CL:1000449,2.64e-08,15;CL:0000188,4.56e-08,9;CL:0002554,1.49e-07,2;CL:1000497,3.31e-07,17;CL:0002518,3.31e-07,17;CL:0000650,7.53e-07,2;CL:1000500,7.53e-07,2;CL:1000618,7.53e-07,2;CL:1001318,7.53e-07,2;CL:0002173,7.53e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.09e-16!143;DOID:305!2.67e-10!106;DOID:162!1.75e-08!235;DOID:14566!2.03e-08!239;DOID:1115!2.87e-07!20 | |ontology_enrichment_disease=DOID:0050687!1.09e-16!143;DOID:305!2.67e-10!106;DOID:162!1.75e-08!235;DOID:14566!2.03e-08!239;DOID:1115!2.87e-07!20 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.71e-10!32;UBERON:0002113!3.23e-10!27;UBERON:0003918!3.23e-10!27;UBERON:0005095!3.23e-10!27;UBERON:0007687!3.23e-10!27;UBERON:0001013!1.33e-08!14;UBERON:0006554!8.52e-08!44;UBERON:0001008!1.89e-07!45;UBERON:0009773!2.60e-07!12;UBERON:0001231!2.60e-07!12;UBERON:0004810!2.60e-07!12;UBERON:0003104!5.85e-07!238;UBERON:0009142!5.85e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.79e-13;10!UBERON:0009773;5.79e-13;10!UBERON:0001231;5.79e-13;10!UBERON:0004810;5.79e-13;10!UBERON:0002113;4.36e-12;24!UBERON:0011143;4.36e-12;24!UBERON:0000489;1.40e-11;29!UBERON:0011135;2.93e-10;5!UBERON:0002216;2.93e-10;5!UBERON:0011134;2.93e-10;5!UBERON:0002209;2.93e-10;5!UBERON:0002213;2.93e-10;5!UBERON:0007844;2.93e-10;5!UBERON:0011138;2.93e-10;5!UBERON:0001130;2.93e-10;5!UBERON:0001066;2.93e-10;5!UBERON:0001468;2.93e-10;5!UBERON:0002242;5.64e-10;3!UBERON:0004905;1.58e-09;8!UBERON:0000982;1.58e-09;8!UBERON:0004770;1.58e-09;8!UBERON:0006554;3.39e-09;30!UBERON:0001008;3.39e-09;30!UBERON:0006555;2.72e-08;15!UBERON:0004819;2.72e-08;15!UBERON:0001285;2.72e-08;15!UBERON:0007684;2.72e-08;15!UBERON:0003567;7.61e-07;2!UBERON:0003838;7.61e-07;2!UBERON:0003586;7.61e-07;2!UBERON:0005169;7.61e-07;2!UBERON:0002321;7.61e-07;2!UBERON:0005215;7.61e-07;2!UBERON:0002303;7.61e-07;2!UBERON:0002319;7.61e-07;2!UBERON:0001013;8.40e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.53e-13,10;UBERON:0002113,5.35e-11,26;UBERON:0003918,5.35e-11,26;UBERON:0011143,5.35e-11,26;UBERON:0005095,5.35e-11,26;UBERON:0007687,5.35e-11,26;UBERON:0000489,1.01e-10,31;UBERON:0011135,4.29e-10,5;UBERON:0002216,4.29e-10,5;UBERON:0011134,4.29e-10,5;UBERON:0002209,4.29e-10,5;UBERON:0002213,4.29e-10,5;UBERON:0005856,4.29e-10,5;UBERON:0005866,4.29e-10,5;UBERON:0005863,4.29e-10,5;UBERON:0007844,4.29e-10,5;UBERON:0011138,4.29e-10,5;UBERON:0001130,4.29e-10,5;UBERON:0001066,4.29e-10,5;UBERON:0001468,4.29e-10,5;UBERON:0003104,6.74e-10,160;UBERON:0009142,6.74e-10,160;UBERON:0002242,8.99e-10,3;UBERON:0003068,8.99e-10,3;UBERON:0002328,8.99e-10,3;UBERON:0004880,8.99e-10,3;UBERON:0004905,2.31e-09,8;UBERON:0000982,2.31e-09,8;UBERON:0004770,2.31e-09,8;UBERON:0004211,2.64e-08,15;UBERON:0009773,2.64e-08,15;UBERON:0001231,2.64e-08,15;UBERON:0001285,2.64e-08,15;UBERON:0007684,2.64e-08,15;UBERON:0004208,2.64e-08,15;UBERON:0006555,1.01e-07,16;UBERON:0004819,1.01e-07,16;UBERON:0003567,7.53e-07,2;UBERON:0003838,7.53e-07,2;UBERON:0003586,7.53e-07,2;UBERON:0005169,7.53e-07,2;UBERON:0002321,7.53e-07,2;UBERON:0005215,7.53e-07,2;UBERON:0002303,7.53e-07,2;UBERON:0002319,7.53e-07,2;UBERON:0001013,8.77e-07,14 | |||
|phase1_expression=0.726713517082227,0,0.281908808191942,0,0,0.872338524100369,0,2.52687949370732,1.30592814099919,0,0,0,0,3.46545788288131,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.869079113764942,0.795285947051099,1.94653948121054,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04614076386261,0.939475989150119,0.647491777472526,0.98315564691574,0,0,0,0,0,5.46096817162816,3.59309070908119,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0.515281080091258,0.930584281657949,1.18143432568886,1.75386609290158,0.504867548488229,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.473227200159376,0.505754070234305,0.241011029883482,0.220587945464788,0.653638332277218,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.983907508344908,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.444485260045183,1.90994212779139,2.34434894420094,5.13217338068116,0.102827492703324,0.901029173531752,0.571652865261156,0,0,0,0.258543431515556,3.57656445851882,0.845302752556,0,0,1.54324424557285,0,0.266422179016099,0,1.08524321078289,1.64648067356154,0.65147236858747,0,1.58390374586686,0,0,0,0,0,0,0,0,2.85273810081437,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,4.2942022101699,2.00068208423871,2.17012018959788,0,0,0,0,0.300946099727719,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.925258162815933,0.887808626565635,0.492762936082855,1.03850885836724,0.464841513839837,0.362578348774867,0,0,0,0.182091168006717,0,1.35359883872224,0.231046011313244,3.13739907670742,1.46139224653261,1.58327443339314,0,0,0.647747748306418,0,1.35473218771926,3.51182841698397,0.764628819135115,0.831076008928724,1.34324852833307,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,1.83674364755032,0.308097234229289,0,0.413509717453592,2.47066563197029,2.90033387828457,0.426133137080504,1.60257664164127,0,0,0,0,0,0,0,3.08033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,1.01455188481352,0.92947049429925,1.40847801266121,2.00775893085672,0.88424136911809,0.7133421029625,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24330549367694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.02555725490326,2.79129200023881,0,0,0,0,0,0,0,0,0.16480387422676,7.17826387635178,0.19924798825107,0,0.251932747854276,0.715880777515084,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,1.04174996959975,0,0,0,0,0,0,0.435753854075961,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,1.80388103297391,0.72581733978073,0,0,0,0,0,1.66409607615766,0,0.195984794828755,0.261177619741208,0.34945333648406,3.26773461696071,0.677294319023596,0.365446585430928,0.656923656425674,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0.19980960958213,0.288180834308212,1.03082936549324,0,0,0.745515213392595,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0.335434687599266,0.788057072991982,2.30800187793992,0.316801009558219,0.179287339332845,1.15149118391667,0,0,2.034148301238,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0.705797459094515,0,1.88397337194073,0.74627401443437,0.934853239388898,2.21922344601045,0.189403005275089,0,3.55924488638614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697852591396,0.336749488765919,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0,0,0.358177682162975,0,0.438568099157414,0.176689145945881,0.38582807654183,0,0.512483037175893,0.345430341731199,0.607719912354764,0,0,0,0,0.327609848846413,0.737318726261158,0.211312123358627,0.19998739585493,0,0.172214979660816,0.567515953566836,0.184105950251841,0,0,0,0.323474434190045,0,1.63814457288021,0.169732529954025,2.97604888142356,2.47871528518004,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.471878893390961,1.28400018965175,1.38630799380406,0,0.690359926060101,0,0.676892955143315,0.40341013740704,0,0,0,1.18284868973636,0,0,0,0,0,0,0.992422356778588,0.703484977438482,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.354581522651905,0.111231401892069,0.156986185701028,0,0.280272163313789,0,0.215927591218621,0.955503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| ||
|short_description=p1@BC044251 | |short_description=p1@BC044251 | ||
}} | }} |
Latest revision as of 09:57, 24 July 2015
Short description: | p1@BC044251 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC044251_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_BC044251_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.53e-13 | 10 |
nephron tubule epithelial cell | 5.53e-13 | 10 |
light melanocyte | 7.53e-10 | 3 |
nucleus pulposus cell of intervertebral disc | 8.99e-10 | 3 |
epithelial cell of nephron | 2.64e-08 | 15 |
cell of skeletal muscle | 4.56e-08 | 9 |
fibroblast of lymphatic vessel | 1.49e-07 | 2 |
kidney cell | 3.31e-07 | 17 |
kidney epithelial cell | 3.31e-07 | 17 |
mesangial cell | 7.53e-07 | 2 |
kidney interstitial cell | 7.53e-07 | 2 |
juxtaglomerular complex cell | 7.53e-07 | 2 |
renal interstitial pericyte | 7.53e-07 | 2 |
extraglomerular mesangial cell | 7.53e-07 | 2 |