FFCP PHASE1:Hg19::chr17:80290234..80290270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80290234..80290270,+ | |||
|description=CAGE_peak_at_chr17:80290234..80290270,+ | |description=CAGE_peak_at_chr17:80290234..80290270,+ | ||
|id=chr17:80290234..80290270,+ | |id=chr17:80290234..80290270,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.62e-13!254;CL:0002251!1.63e-08!21;CL:0000223!6.76e-07!59 | |ontology_enrichment_celltype=CL:0000066!3.62e-13!254;CL:0002251!1.63e-08!21;CL:0000223!6.76e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.38e-07;2!CL:0000242;3.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.83e-09,253;CL:0000242,2.31e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.54e-19;29!UBERON:0006595;2.46e-07;86 | |||
|ontology_enrichment_disease=DOID:0050687!5.01e-36!143;DOID:14566!6.00e-34!239;DOID:162!5.03e-33!235;DOID:305!1.11e-32!106;DOID:0050686!4.34e-09!137;DOID:3119!9.44e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:305;4.56e-08;106!DOID:3910;3.38e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.94e-23,106;DOID:0050687,1.54e-20,143;DOID:162,2.96e-15,235;DOID:14566,1.01e-14,239;DOID:3910,6.00e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!9.85e-21!155;UBERON:0001555!9.85e-21!155;UBERON:0007026!9.85e-21!155;UBERON:0004921!1.32e-19!129;UBERON:0004185!1.32e-19!129;UBERON:0004119!8.58e-18!169;UBERON:0000925!8.58e-18!169;UBERON:0006595!8.58e-18!169;UBERON:0000077!1.09e-15!130;UBERON:0001041!1.50e-12!98;UBERON:0001737!4.59e-12!9;UBERON:0001004!4.72e-11!72;UBERON:0008947!9.42e-10!38;UBERON:0003258!9.42e-10!38;UBERON:0000072!3.06e-09!46;UBERON:0000161!1.16e-08!35;UBERON:0001557!2.88e-08!19;UBERON:0000344!8.07e-08!12;UBERON:0000065!1.12e-07!53;UBERON:0005911!5.40e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.39e-30;9!UBERON:0001557;6.39e-30;9!UBERON:0000072;1.82e-14;37!UBERON:0000065;3.52e-11;44!UBERON:0005409;3.44e-08;22!UBERON:0004903;3.38e-07;2!UBERON:0002173;3.38e-07;2!UBERON:0002186;3.38e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.61e-30,9;UBERON:0008947,4.65e-16,38;UBERON:0003258,4.65e-16,38;UBERON:0001557,2.63e-13,19;UBERON:0004921,2.86e-13,118;UBERON:0000072,2.75e-12,47;UBERON:0001007,1.47e-11,145;UBERON:0001555,1.47e-11,145;UBERON:0007026,1.47e-11,145;UBERON:0000065,3.09e-10,54;UBERON:0001041,6.00e-10,87;UBERON:0004119,7.87e-10,160;UBERON:0000925,7.87e-10,160;UBERON:0006595,7.87e-10,160;UBERON:0001004,1.10e-07,74;UBERON:0005409,5.59e-07,25;UBERON:0004903,6.00e-07,2;UBERON:0002173,6.00e-07,2;UBERON:0002186,6.00e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1507695692886,1.7931249457037,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,2.19410023383795,1.27867425159808,0,0,0,1.50749199154046,1.5644487552606,0,0.605399502633369,0,0,0,0,0,0,0,0,0.855038231223746,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,1.10825646193673,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,2.12952240071719,2.52877035117153,2.41011029883482,2.20587945464788,3.05031221729369,1.66089433377768,2.69662616320329,2.35465758150415,3.46272441251751,0,1.40241773803446,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41932173530541,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.725156697549733,0.200506470303285,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,1.22520107990516,0,0,0,0.956557636372934,0,0,0,0,0,0,0,0,0,0,0.80719882876419,0,0,0,0,0,0,0.556812347790485,0,0,0,1.4098700508785,2.05854594449042,0,0,0.557216921387392,1.42068073403207,0,1.48482340416319,0.921482106297696,0,0,0.333926115068718,0,0,0.19924798825107,0.552567831062295,2.26739473068848,0,0,0,0.539210106883961,1.07412704805365,0,0.197286811273867,0,0,0,0,0,0.260427761085233,1.13697999995054,1.44999915086959,0,1.01701460117107,0,2.41320361269025,0.291604613383254,0.347249989866585,0,0,0,0,0,0,1.96089234334182,1.95193241990045,0.307801034015188,0,0.23056390438806,0.718061155278177,0,0,0.0915975934018623,0,0,0,0.498635045700469,2.03036094555463,1.56850027454192,0.671286347903371,0.37950746544837,0.476809736941136,0.421996129056054,0.489698424477443,0.565412285735763,4.32777279484182,4.97630965539252,2.0345239835768,2.4441205797345,0.296521128680622,0,0,0,0,0,0,0.391329237864179,1.21390189767046,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0.698906672968121,0,0.967563312890852,1.09633975629278,0.903270027585302,0.290967049465258,0,0.451961481561065,0,0.19871461170299,0,2.54216797555244,0.320635281006135,0,1.19885765749278,0.288180834308212,0,2.05913997434357,1.7286575758578,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,1.25501137532991,0.575745591958336,0,0,0,0.542999601753713,0,0,0,0,0.851940108927109,0.566560457600628,0,0,0,0,0.513260513652988,0.704815022316672,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.415045904808692,0.37494122388632,0,1.42732666772484,0,1.40500471742064,1.7390523433299,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,1.92619830407303,0.428883182749851,0,0.906823702049089,0.231522474323834,0.244736704506468,1.79088841081487,0,2.41212454536578,0.706756583783524,0,0.337884881306145,0.512483037175893,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.559518030877778,0,0.383683113910955,0.431299245586727,0,0.109209638192014,2.54598794931038,0,0,1.67593475391973,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.392590874004102,0.353909170043221,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0.0752103283492573,0.40341013740704,0,0,0.982631505060581,0.147856086217045,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.827356886187777,1.66847102838104,0.39246546425257,0,0,0,0,0,0,0,0.464965701472501,0,0,0.414432328326074,0.17071847709395,0.691259661814092,4.30227358820278,0.118332000730565,0.0852134047591577,0,0,0,0,0,1.17780280338292,0,0,0,0,0,0,0.994753875806841,0,0.79062257427272,0,3.01925687133347,5.24784275134024,0.437119121007915,0.470317296361523,0.245148321753905,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0,1.12337913364836,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.248298857183432,0,0,0,0.435433495793923,0,0.471464371102113,0.430333232356058,0,0.244209805832924,0.533636729388577,0,0.0898252021065869,0,0.122241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| ||
|short_description=p@chr17:80290234..80290270,+ | |short_description=p@chr17:80290234..80290270,+ | ||
}} | }} |
Latest revision as of 23:05, 25 July 2015
Short description: | p@chr17:80290234..80290270, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80290234..80290270, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.83e-09 | 253 |
Merkel cell | 2.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.61e-30 | 9 |
respiratory primordium | 4.65e-16 | 38 |
endoderm of foregut | 4.65e-16 | 38 |
upper respiratory tract | 2.63e-13 | 19 |
subdivision of digestive tract | 2.86e-13 | 118 |
segment of respiratory tract | 2.75e-12 | 47 |
digestive system | 1.47e-11 | 145 |
digestive tract | 1.47e-11 | 145 |
primitive gut | 1.47e-11 | 145 |
respiratory tract | 3.09e-10 | 54 |
foregut | 6.00e-10 | 87 |
endoderm-derived structure | 7.87e-10 | 160 |
endoderm | 7.87e-10 | 160 |
presumptive endoderm | 7.87e-10 | 160 |
respiratory system | 1.10e-07 | 74 |
gastrointestinal system | 5.59e-07 | 25 |
bronchoalveolar duct junction | 6.00e-07 | 2 |
alveolar duct | 6.00e-07 | 2 |
bronchiole | 6.00e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.94e-23 | 106 |
cell type cancer | 1.54e-20 | 143 |
cancer | 2.96e-15 | 235 |
disease of cellular proliferation | 1.01e-14 | 239 |
lung adenocarcinoma | 6.00e-07 | 2 |