FFCP PHASE1:Hg19::chr12:71182681..71182693,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5801 | |EntrezGene=5801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9680 | |HGNC=9680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_uc010stq.1_5end | |association_with_transcript=6bp_to_uc010stq.1_5end | ||
|cluster_id=chr12:71182681..71182693,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_18_at_PTPRR_5end | |description=CAGE_peak_18_at_PTPRR_5end | ||
|id=chr12:71182681..71182693,- | |id=chr12:71182681..71182693,- | ||
|ontology_enrichment_celltype=CL:0000946!1.93e-16!1;CL:0000786!1.93e-16!1;CL:0000980!1.93e-16!1;CL:0000785!6.94e-09!2;CL:0000955!6.94e-09!2;CL:0000818!6.94e-09!2;CL:0000954!6.94e-09!2;CL:0000816!6.94e-09!2 | |ontology_enrichment_celltype=CL:0000946!1.93e-16!1;CL:0000786!1.93e-16!1;CL:0000980!1.93e-16!1;CL:0000785!6.94e-09!2;CL:0000955!6.94e-09!2;CL:0000818!6.94e-09!2;CL:0000954!6.94e-09!2;CL:0000816!6.94e-09!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.09e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!4.46e-21!3;UBERON:0005290!4.46e-21!3;UBERON:0010096!4.46e-21!3;UBERON:0004733!1.05e-20!12;UBERON:0002028!1.05e-20!12;UBERON:0007277!1.05e-20!12;UBERON:0004732!3.82e-19!13;UBERON:0003076!1.21e-16!15;UBERON:0003057!1.21e-16!15;UBERON:0007190!2.25e-16!1;UBERON:0001049!3.44e-16!57;UBERON:0005068!3.44e-16!57;UBERON:0006241!3.44e-16!57;UBERON:0007135!3.44e-16!57;UBERON:0002616!1.25e-15!59;UBERON:0000073!8.16e-15!94;UBERON:0001016!8.16e-15!94;UBERON:0001017!6.56e-14!82;UBERON:0003075!2.11e-13!86;UBERON:0007284!2.11e-13!86;UBERON:0005743!3.05e-13!86;UBERON:0000955!4.08e-13!69;UBERON:0006238!4.08e-13!69;UBERON:0002346!8.86e-13!90;UBERON:0002037!2.49e-11!6;UBERON:0006215!2.49e-11!6;UBERON:0007023!6.12e-10!115;UBERON:0001905!3.71e-09!2;UBERON:0002757!3.71e-09!2;UBERON:0010134!3.71e-09!2;UBERON:0002784!3.71e-09!2;UBERON:0005408!3.71e-09!2;UBERON:0001899!3.71e-09!2;UBERON:0002360!5.94e-09!2;UBERON:0000094!5.94e-09!2;UBERON:0007645!5.94e-09!2;UBERON:0001870!8.09e-09!2;UBERON:0002298!1.65e-08!8;UBERON:0004121!6.33e-08!169;UBERON:0002680!7.51e-08!9;UBERON:0001895!7.51e-08!9;UBERON:0010092!7.51e-08!9;UBERON:0000924!1.01e-07!173;UBERON:0006601!1.01e-07!173;UBERON:0000033!3.75e-07!123;UBERON:0000153!8.62e-07!129;UBERON:0007811!8.62e-07!129 | |ontology_enrichment_uberon=UBERON:0001896!4.46e-21!3;UBERON:0005290!4.46e-21!3;UBERON:0010096!4.46e-21!3;UBERON:0004733!1.05e-20!12;UBERON:0002028!1.05e-20!12;UBERON:0007277!1.05e-20!12;UBERON:0004732!3.82e-19!13;UBERON:0003076!1.21e-16!15;UBERON:0003057!1.21e-16!15;UBERON:0007190!2.25e-16!1;UBERON:0001049!3.44e-16!57;UBERON:0005068!3.44e-16!57;UBERON:0006241!3.44e-16!57;UBERON:0007135!3.44e-16!57;UBERON:0002616!1.25e-15!59;UBERON:0000073!8.16e-15!94;UBERON:0001016!8.16e-15!94;UBERON:0001017!6.56e-14!82;UBERON:0003075!2.11e-13!86;UBERON:0007284!2.11e-13!86;UBERON:0005743!3.05e-13!86;UBERON:0000955!4.08e-13!69;UBERON:0006238!4.08e-13!69;UBERON:0002346!8.86e-13!90;UBERON:0002037!2.49e-11!6;UBERON:0006215!2.49e-11!6;UBERON:0007023!6.12e-10!115;UBERON:0001905!3.71e-09!2;UBERON:0002757!3.71e-09!2;UBERON:0010134!3.71e-09!2;UBERON:0002784!3.71e-09!2;UBERON:0005408!3.71e-09!2;UBERON:0001899!3.71e-09!2;UBERON:0002360!5.94e-09!2;UBERON:0000094!5.94e-09!2;UBERON:0007645!5.94e-09!2;UBERON:0001870!8.09e-09!2;UBERON:0002298!1.65e-08!8;UBERON:0004121!6.33e-08!169;UBERON:0002680!7.51e-08!9;UBERON:0001895!7.51e-08!9;UBERON:0010092!7.51e-08!9;UBERON:0000924!1.01e-07!173;UBERON:0006601!1.01e-07!173;UBERON:0000033!3.75e-07!123;UBERON:0000153!8.62e-07!129;UBERON:0007811!8.62e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.04e-34;2!UBERON:0002757;5.04e-34;2!UBERON:0010134;5.04e-34;2!UBERON:0005408;5.04e-34;2!UBERON:0001899;5.04e-34;2!UBERON:0003296;8.69e-18;4!UBERON:0010133;8.69e-18;4!UBERON:0002784;8.69e-18;4!UBERON:0002037;2.74e-12;6!UBERON:0001894;8.99e-11;7!UBERON:0002680;1.21e-08;9!UBERON:0001895;1.21e-08;9!UBERON:0004733;8.38e-07;12!UBERON:0002028;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.04e-34,2;UBERON:0002757,5.04e-34,2;UBERON:0010134,5.04e-34,2;UBERON:0005408,5.04e-34,2;UBERON:0001899,5.04e-34,2;UBERON:0003296,8.69e-18,4;UBERON:0010133,8.69e-18,4;UBERON:0002784,8.69e-18,4;UBERON:0002037,2.74e-12,6;UBERON:0006215,2.74e-12,6;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7;UBERON:0002680,1.21e-08,9;UBERON:0001895,1.21e-08,9;UBERON:0010092,1.21e-08,9;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
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|short_description=p18@PTPRR | |short_description=p18@PTPRR | ||
}} | }} |
Latest revision as of 16:19, 24 September 2015
Short description: | p18@PTPRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PTPRR_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 6bp_to_uc010stq.1_5end |
EntrezGene: | PTPRR |
HGNC: | 9680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.04e-34 | 2 |
regional part of epithalamus | 5.04e-34 | 2 |
secretory circumventricular organ | 5.04e-34 | 2 |
circumventricular organ | 5.04e-34 | 2 |
epithalamus | 5.04e-34 | 2 |
gland of diencephalon | 8.69e-18 | 4 |
neuroendocrine gland | 8.69e-18 | 4 |
regional part of diencephalon | 8.69e-18 | 4 |
cerebellum | 2.74e-12 | 6 |
rhombic lip | 2.74e-12 | 6 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
regional part of metencephalon | 1.21e-08 | 9 |
metencephalon | 1.21e-08 | 9 |
future metencephalon | 1.21e-08 | 9 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |