FFCP PHASE1:Hg19::chr12:75723814..75723850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84698 | |EntrezGene=84698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16471 | |HGNC=16471 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXY5 | |UniProt=Q9BXY5 | ||
|association_with_transcript=0bp_to_ENST00000409445,ENST00000493070,NM_032606,uc001sxk.3_5end | |association_with_transcript=0bp_to_ENST00000409445,ENST00000493070,NM_032606,uc001sxk.3_5end | ||
|cluster_id=chr12:75723814..75723850,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_4_at_CAPS2_5end | |description=CAGE_peak_4_at_CAPS2_5end | ||
|id=chr12:75723814..75723850,- | |id=chr12:75723814..75723850,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.59e-12;2!UBERON:0009117;7.40e-10;10!UBERON:0005564;7.40e-10;10!UBERON:0008947;1.67e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@CAPS2 | |short_description=p4@CAPS2 | ||
}} | }} |
Latest revision as of 19:38, 24 September 2015
Short description: | p4@CAPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAPS2_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000409445, ENST00000493070, NM_032606, uc001sxk.3_5end |
EntrezGene: | CAPS2 |
HGNC: | 16471 |
UniProt: | Q9BXY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.61e-30 | 3 |
myelencephalon | 5.61e-30 | 3 |
future myelencephalon | 5.61e-30 | 3 |
lower lobe of right lung | 4.10e-23 | 1 |
right lung lobe | 4.10e-23 | 1 |
lower lobe of lung | 4.10e-23 | 1 |
lobe of lung | 4.10e-23 | 1 |
right lung | 4.10e-23 | 1 |
brainstem | 1.52e-15 | 6 |
caudate nucleus | 1.85e-12 | 2 |
future caudate nucleus | 1.85e-12 | 2 |
open tracheal system trachea | 3.24e-12 | 2 |
testis | 3.95e-12 | 8 |
adult organism | 2.48e-09 | 114 |
male reproductive organ | 4.43e-09 | 11 |
caudate-putamen | 9.66e-09 | 3 |
dorsal striatum | 9.66e-09 | 3 |
segmental subdivision of hindbrain | 2.96e-08 | 12 |
hindbrain | 2.96e-08 | 12 |
presumptive hindbrain | 2.96e-08 | 12 |
segmental subdivision of nervous system | 1.09e-07 | 13 |
corpus striatum | 7.27e-07 | 4 |
striatum | 7.27e-07 | 4 |
ventral part of telencephalon | 7.27e-07 | 4 |
future corpus striatum | 7.27e-07 | 4 |
posterior neural tube | 8.83e-07 | 15 |
chordal neural plate | 8.83e-07 | 15 |