FFCP PHASE1:Hg19::chr19:12662565..12662577,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:12662565..12662577,+ | |||
|coexpression_cluster_id=C1150 | |||
|description=CAGE_peak_at_chr19:12662565..12662577,+ | |description=CAGE_peak_at_chr19:12662565..12662577,+ | ||
|id=chr19:12662565..12662577,+ | |id=chr19:12662565..12662577,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.10e-26!172;CL:0000566!4.10e-26!172;CL:0000988!2.82e-25!182;CL:0002032!4.38e-23!165;CL:0000837!4.38e-23!165;CL:0000860!1.45e-22!45;CL:0000738!1.33e-20!140;CL:0002057!2.17e-20!42;CL:0000763!3.15e-20!112;CL:0000049!3.15e-20!112;CL:0002087!1.41e-19!119;CL:0002031!2.70e-19!124;CL:0000839!3.91e-18!70;CL:0002194!5.36e-18!63;CL:0000576!5.36e-18!63;CL:0000040!5.36e-18!63;CL:0000559!5.36e-18!63;CL:0000557!1.24e-17!71;CL:0000766!2.01e-17!76;CL:0002009!6.07e-17!65 | |ontology_enrichment_celltype=CL:0000037!4.10e-26!172;CL:0000566!4.10e-26!172;CL:0000988!2.82e-25!182;CL:0002032!4.38e-23!165;CL:0000837!4.38e-23!165;CL:0000860!1.45e-22!45;CL:0000738!1.33e-20!140;CL:0002057!2.17e-20!42;CL:0000763!3.15e-20!112;CL:0000049!3.15e-20!112;CL:0002087!1.41e-19!119;CL:0002031!2.70e-19!124;CL:0000839!3.91e-18!70;CL:0002194!5.36e-18!63;CL:0000576!5.36e-18!63;CL:0000040!5.36e-18!63;CL:0000559!5.36e-18!63;CL:0000557!1.24e-17!71;CL:0000766!2.01e-17!76;CL:0002009!6.07e-17!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.67e-58;33!CL:0002057;2.67e-58;33!CL:0000473;1.81e-38;39!CL:0000234;1.81e-38;39!CL:0000576;4.28e-25;48!CL:0000766;4.96e-17;69!CL:0002087;7.28e-10;104!CL:0000623;1.07e-09;3!CL:0000763;7.93e-09;100!CL:0000222;6.85e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.07e-48,42;CL:0002057,3.07e-48,42;CL:0000473,9.05e-42,48;CL:0000234,9.05e-42,48;CL:0002194,1.04e-32,59;CL:0000576,1.04e-32,59;CL:0000040,1.04e-32,59;CL:0000559,1.04e-32,59;CL:0002009,1.54e-31,61;CL:0000839,6.42e-29,66;CL:0000557,1.93e-28,67;CL:0000766,3.00e-26,72;CL:0000763,1.08e-20,108;CL:0000049,1.08e-20,108;CL:0000738,2.25e-19,136;CL:0002087,4.09e-19,115;CL:0000037,2.81e-18,168;CL:0002031,3.67e-18,120;CL:0000988,4.01e-17,177;CL:0002032,1.03e-15,161;CL:0000837,1.03e-15,161;CL:0000623,1.90e-09,3;CL:0000825,1.90e-09,3;CL:0000134,4.05e-07,354;CL:0002320,6.88e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-34;42 | |||
|ontology_enrichment_disease=DOID:2531!5.94e-11!51;DOID:0060083!5.94e-11!51;DOID:1240!1.22e-08!39;DOID:162!2.19e-07!235;DOID:0050686!6.26e-07!137;DOID:14566!8.89e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.61e-16!102;UBERON:0003061!2.61e-16!102;UBERON:0002371!1.26e-15!80;UBERON:0001474!1.22e-14!86;UBERON:0002193!2.13e-14!112;UBERON:0002405!6.76e-14!115;UBERON:0004765!5.32e-10!101;UBERON:0001434!5.32e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-24,76;UBERON:0001474,1.18e-22,82;UBERON:0002405,3.98e-22,93;UBERON:0002390,8.09e-21,98;UBERON:0003061,8.09e-21,98;UBERON:0004765,2.39e-20,90;UBERON:0002193,1.46e-18,108;UBERON:0001434,5.60e-18,100;UBERON:0002204,2.21e-09,167;UBERON:0003081,3.68e-08,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.393553906568396,0.393364276848904,0,0,0.919421224478927,0,0,0,0.426507697462265,0.587200878669695,0.553995408531877,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.929716147622738,1.6446715520873,2.16794459626573,0.28769239232215,1.0246428261164,0.236482229888585,0.689491361473237,5.16387746867061,4.06279459783025,1.69418105588344,0.545812300115692,0.898893937780338,1.83650335422542,1.28371610830437,2.55734850319616,0.329851300186716,1.19678194572979,0,0.290209238628584,1.70215567407342,3.11411124497787,1.25624332628372,1.0429658368404,2.17188844705117,4.23779651843358,6.99727508376373,1.89877432464531,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,2.6487785964879,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0.234004265139238,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.50496973370552,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,1.07813787429759,1.02674429023799,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0.426851060090485,0.318852545457645,0.59873811429845,0,0.846694330895531,0.324621940274555,0.561594356226918,1.14117339516596,0.156679895773023,0,0.338583555603207,0.1605880751037,0.201799707191048,0.851692475380653,0.343505344755765,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0.540911356951966,0.33307196799782,0,0.37428108081644,0,0,0.66866030566487,0,0.47748896947538,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0.251932747854276,0,0.492339221844278,0,0.0898683511473268,0,2.04628948090749,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0.113942055847001,0.46112780877612,0.718061155278177,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0.335643173951685,0,0.635746315921515,0,0,0,0.216388639742091,0.995261931078505,0,0,0.889563386041866,0,0.417687798021821,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.580537987734511,0.584714536689484,0.410577285266046,0,0,0,0,0,0,0.586654148204409,0,0,0,0.288180834308212,0,0.514784993585894,0.432164393964449,0,0,0,0,0.203996435272644,0.288950589901519,0,0.273810757783986,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0.717873024576814,0,0.429226048136571,0.223171457441873,0,0,6.98975697164723,0.0787831823072236,0,0,0.196854963029498,0.169346664131569,0,0,0.482259445395058,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.316801009558219,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0.171086837884329,0.704815022316672,0,0.157204305099666,0,0,0.197611631897944,0.487170393523584,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,1.26184898228651,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0.213383459388282,0.344429959321631,0,0,0,0,0.255788742607303,0.215649622793364,0.314531883711793,0,0,0,0.247871528518004,0,0,0.315446980005013,0,0,0,0.0642292250964595,0,0.4789015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| ||
|short_description=p@chr19:12662565..12662577,+ | |short_description=p@chr19:12662565..12662577,+ | ||
}} | }} |
Latest revision as of 03:41, 26 July 2015
Short description: | p@chr19:12662565..12662577, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:12662565..12662577, + |
Coexpression cluster: | C1150_CD14_thymus_hepatoblastoma_CD4_CD34_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.07e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.07e-48 | 42 |
defensive cell | 9.05e-42 | 48 |
phagocyte | 9.05e-42 | 48 |
monopoietic cell | 1.04e-32 | 59 |
monocyte | 1.04e-32 | 59 |
monoblast | 1.04e-32 | 59 |
promonocyte | 1.04e-32 | 59 |
macrophage dendritic cell progenitor | 1.54e-31 | 61 |
myeloid lineage restricted progenitor cell | 6.42e-29 | 66 |
granulocyte monocyte progenitor cell | 1.93e-28 | 67 |
myeloid leukocyte | 3.00e-26 | 72 |
myeloid cell | 1.08e-20 | 108 |
common myeloid progenitor | 1.08e-20 | 108 |
leukocyte | 2.25e-19 | 136 |
nongranular leukocyte | 4.09e-19 | 115 |
hematopoietic stem cell | 2.81e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 3.67e-18 | 120 |
hematopoietic cell | 4.01e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.03e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-15 | 161 |
natural killer cell | 1.90e-09 | 3 |
pro-NK cell | 1.90e-09 | 3 |
mesenchymal cell | 4.05e-07 | 354 |
connective tissue cell | 6.88e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-24 | 76 |
bone element | 1.18e-22 | 82 |
immune system | 3.98e-22 | 93 |
hematopoietic system | 8.09e-21 | 98 |
blood island | 8.09e-21 | 98 |
skeletal element | 2.39e-20 | 90 |
hemolymphoid system | 1.46e-18 | 108 |
skeletal system | 5.60e-18 | 100 |
musculoskeletal system | 2.21e-09 | 167 |
lateral plate mesoderm | 3.68e-08 | 203 |