FFCP PHASE1:Hg19::chr19:39898678..39898692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39898678..39898692,- | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_at_chr19:39898678..39898692,- | |description=CAGE_peak_at_chr19:39898678..39898692,- | ||
|id=chr19:39898678..39898692,- | |id=chr19:39898678..39898692,- | ||
|ontology_enrichment_celltype=CL:0000766!9.72e-29!76;CL:0002057!1.46e-26!42;CL:0000860!2.14e-26!45;CL:0000738!3.86e-24!140;CL:0000557!2.85e-23!71;CL:0002009!5.60e-23!65;CL:0000839!2.29e-22!70;CL:0002194!8.73e-22!63;CL:0000576!8.73e-22!63;CL:0000040!8.73e-22!63;CL:0000559!8.73e-22!63;CL:0002031!2.82e-18!124;CL:0002087!9.47e-18!119;CL:0000763!1.01e-17!112;CL:0000049!1.01e-17!112;CL:0000037!2.59e-17!172;CL:0000566!2.59e-17!172;CL:0002032!1.30e-15!165;CL:0000837!1.30e-15!165;CL:0000988!1.44e-15!182;CL:0000094!4.74e-08!8;CL:0002393!5.55e-07!9;CL:0002397!5.55e-07!9 | |ontology_enrichment_celltype=CL:0000766!9.72e-29!76;CL:0002057!1.46e-26!42;CL:0000860!2.14e-26!45;CL:0000738!3.86e-24!140;CL:0000557!2.85e-23!71;CL:0002009!5.60e-23!65;CL:0000839!2.29e-22!70;CL:0002194!8.73e-22!63;CL:0000576!8.73e-22!63;CL:0000040!8.73e-22!63;CL:0000559!8.73e-22!63;CL:0002031!2.82e-18!124;CL:0002087!9.47e-18!119;CL:0000763!1.01e-17!112;CL:0000049!1.01e-17!112;CL:0000037!2.59e-17!172;CL:0000566!2.59e-17!172;CL:0002032!1.30e-15!165;CL:0000837!1.30e-15!165;CL:0000988!1.44e-15!182;CL:0000094!4.74e-08!8;CL:0002393!5.55e-07!9;CL:0002397!5.55e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.65e-22;33!CL:0002057;3.65e-22;33!CL:0000094;3.06e-18;8!CL:0000473;7.84e-18;39!CL:0000234;7.84e-18;39!CL:0000766;1.77e-15;69!CL:0000576;2.51e-14;48!CL:0000081;6.03e-13;11!CL:0000775;4.42e-10;3!CL:0000763;6.70e-10;100!CL:0000226;1.23e-09;3!CL:0000842;1.23e-09;3!CL:0000623;4.03e-09;3!CL:0002087;1.91e-08;104!CL:0002393;3.72e-08;6!CL:0002397;3.72e-08;6!CL:0000771;2.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.57e-38,72;CL:0000738,1.59e-32,136;CL:0000860,1.20e-27,42;CL:0002057,1.20e-27,42;CL:0000557,4.32e-26,67;CL:0000473,4.69e-26,48;CL:0000234,4.69e-26,48;CL:0000839,1.63e-24,66;CL:0000037,3.77e-24,168;CL:0000763,6.62e-24,108;CL:0000049,6.62e-24,108;CL:0002009,1.52e-22,61;CL:0000988,2.42e-22,177;CL:0002194,1.78e-21,59;CL:0000576,1.78e-21,59;CL:0000040,1.78e-21,59;CL:0000559,1.78e-21,59;CL:0002032,1.81e-21,161;CL:0000837,1.81e-21,161;CL:0002031,1.95e-20,120;CL:0002087,3.41e-20,115;CL:0000094,2.08e-18,8;CL:0000081,4.59e-13,11;CL:0000775,2.54e-10,3;CL:0000134,7.99e-10,354;CL:0000226,1.35e-09,3;CL:0000842,1.35e-09,3;CL:0000623,1.98e-09,3;CL:0000825,1.98e-09,3;CL:0002320,2.12e-09,361;CL:0000219,6.42e-08,386;CL:0000771,1.70e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-21;42!CL:0000049;5.69e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-24!102;UBERON:0003061!2.11e-24!102;UBERON:0002193!2.16e-22!112;UBERON:0002371!1.02e-20!80;UBERON:0002405!8.10e-18!115;UBERON:0001474!1.03e-17!86;UBERON:0004765!7.25e-16!101;UBERON:0001434!7.25e-16!101;UBERON:0007023!1.59e-11!115;UBERON:0002204!4.51e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.51e-25,98;UBERON:0003061,6.51e-25,98;UBERON:0002371,3.76e-22,76;UBERON:0002193,8.55e-22,108;UBERON:0001474,5.26e-20,82;UBERON:0004765,1.36e-17,90;UBERON:0002405,8.51e-17,93;UBERON:0001434,1.96e-16,100;UBERON:0003081,1.29e-10,203;UBERON:0002384,7.98e-09,371;UBERON:0002204,9.59e-08,167 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0.393364276848904,1.15148819429164,3.8704030829019,0,0,0,0,0,0.293600439334847,0.553995408531877,3.20871115952227,4.12320654360118,0,0.32389366601898,0,0.726991193897824,0.755751887377619,0.727752183563449,1.62700325833979,0.411167888021826,3.09706370895104,2.3015391385772,1.2808035326455,1.41889337933151,1.03423704220986,0.645484683583826,4.06279459783025,0.752969358170419,0.818718450173537,0,3.97909060082173,1.60464513538047,3.19668562899521,2.63881040149373,1.19678194572979,0.852449501065388,2.03146467040009,0,1.24564449799115,2.26123798731069,0.521482918420201,1.3031330682307,1.21079900526674,0.736555271975129,0.632924774881769,0.422510572623884,1.4882300997553,1.25795187305026,1.46027220490444,0.750884464207532,0.64290234678832,0.570025487482497,0.79566670879636,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0.983548850569165,0.786021525498329,4.5232329779892,0.167186495390678,0,0.946895611469467,0,0,0,0.221533894583621,0,0,0.260118695119756,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0,0,0,0,0,2.21767417547206,4.01160293675261,1.88271725047639,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.589405839739707,0,0,0,0.174129737299267,0.132957960518865,1.19245312152671,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0.109750285408626,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,2.28060927094849,3.02651902175619,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0.502257091432126,4.21667878966063,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,1.37921532141349,2.58753089831421,1.92514554419623,0,0,0,0,0,4.49404214368309,2.99161459204025,2.90090859405225,0.24538298343828,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,1.24060815673732,3.45142721309787,2.45473382947922,0,0,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.26664581178598,0,0,0,0,0,0,0.376575203107117,0.43050537267123,1.68471475667626,0.443430153536676,0,1.52234282769651,0.764637207142375,0,0,0,0.648473311192717,1.08006287447623,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,2.19172787076177,2.48655523978033,0,0,0.246169610922139,0,0.179736702294654,0,0,0.690503839458535,2.3948309234694,0,0,0.0927680981618513,0,0,0.0874599999961957,2.17499872630438,0.341380344856499,0,0.236387681767936,0,0,0,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0,0,0.278847488557207,0.384751292518985,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.530745387020035,1.83309043480088,0.296521128680622,0,0.104421949505455,0.269604531922708,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,1.55182426381471,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.85381197895741,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0,0,0,1.80126086612937,0.136905378891993,0,0,0,1.11712960508902,0,0,0.399358000997982,0.858452096273142,0,0.403100834920358,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0.0788057072991982,0.104909176269996,0.105600336519406,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0.293104467356165,5.30027555648885,0.387848869084652,0,0,0,1.60181118851542,0.628817220398664,2.48543433208317,0.496166021811951,0.395223263795889,0,0,1.63205341010842,2.506898940227,0.612691153526923,2.29510841496863,0,0,0.122026264901963,0.250381861413,0.5734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| ||
|short_description=p@chr19:39898678..39898692,- | |short_description=p@chr19:39898678..39898692,- | ||
}} | }} |
Latest revision as of 07:37, 26 July 2015
Short description: | p@chr19:39898678..39898692, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39898678..39898692, - |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.51e-25 | 98 |
blood island | 6.51e-25 | 98 |
bone marrow | 3.76e-22 | 76 |
hemolymphoid system | 8.55e-22 | 108 |
bone element | 5.26e-20 | 82 |
skeletal element | 1.36e-17 | 90 |
immune system | 8.51e-17 | 93 |
skeletal system | 1.96e-16 | 100 |
lateral plate mesoderm | 1.29e-10 | 203 |
connective tissue | 7.98e-09 | 371 |
musculoskeletal system | 9.59e-08 | 167 |