FFCP PHASE1:Hg19::chr19:41082802..41082809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92799 | |EntrezGene=92799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19214 | |HGNC=19214 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUW2 | |UniProt=B4DUW2 | ||
|association_with_transcript=41bp_to_ENST00000446701_5end | |association_with_transcript=41bp_to_ENST00000446701_5end | ||
|cluster_id=chr19:41082802..41082809,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_SHKBP1_5end | |description=CAGE_peak_2_at_SHKBP1_5end | ||
|id=chr19:41082802..41082809,+ | |id=chr19:41082802..41082809,+ | ||
|ontology_enrichment_celltype=CL:0000144!4.37e-27!625;CL:0000003!7.83e-26!722;CL:0002057!4.94e-25!42;CL:0002371!1.16e-24!591;CL:0000548!1.19e-23!679;CL:0000004!1.19e-23!679;CL:0000255!1.19e-23!679;CL:0000012!1.21e-23!682;CL:0000860!5.22e-22!45;CL:0000063!5.19e-16!578;CL:0000766!6.12e-16!76;CL:0002194!3.95e-14!63;CL:0000576!3.95e-14!63;CL:0000040!3.95e-14!63;CL:0000559!3.95e-14!63;CL:0002009!1.56e-13!65;CL:0000763!2.90e-12!112;CL:0000049!2.90e-12!112;CL:0000034!8.05e-12!444;CL:0000723!9.20e-12!436;CL:0000839!1.35e-11!70;CL:0000557!1.96e-11!71;CL:0000738!4.30e-11!140;CL:0000048!4.77e-11!430;CL:0000988!7.52e-11!182;CL:0002087!1.64e-10!119;CL:0002032!2.75e-10!165;CL:0000837!2.75e-10!165;CL:0000037!7.02e-10!172;CL:0000566!7.02e-10!172;CL:0000219!2.45e-09!390;CL:0002320!3.19e-09!365;CL:0000134!9.84e-09!358;CL:0002031!3.95e-08!124 | |ontology_enrichment_celltype=CL:0000144!4.37e-27!625;CL:0000003!7.83e-26!722;CL:0002057!4.94e-25!42;CL:0002371!1.16e-24!591;CL:0000548!1.19e-23!679;CL:0000004!1.19e-23!679;CL:0000255!1.19e-23!679;CL:0000012!1.21e-23!682;CL:0000860!5.22e-22!45;CL:0000063!5.19e-16!578;CL:0000766!6.12e-16!76;CL:0002194!3.95e-14!63;CL:0000576!3.95e-14!63;CL:0000040!3.95e-14!63;CL:0000559!3.95e-14!63;CL:0002009!1.56e-13!65;CL:0000763!2.90e-12!112;CL:0000049!2.90e-12!112;CL:0000034!8.05e-12!444;CL:0000723!9.20e-12!436;CL:0000839!1.35e-11!70;CL:0000557!1.96e-11!71;CL:0000738!4.30e-11!140;CL:0000048!4.77e-11!430;CL:0000988!7.52e-11!182;CL:0002087!1.64e-10!119;CL:0002032!2.75e-10!165;CL:0000837!2.75e-10!165;CL:0000037!7.02e-10!172;CL:0000566!7.02e-10!172;CL:0000219!2.45e-09!390;CL:0002320!3.19e-09!365;CL:0000134!9.84e-09!358;CL:0002031!3.95e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-31;33!CL:0002057;2.17e-31;33!CL:0000473;1.17e-23;39!CL:0000234;1.17e-23;39!CL:0000576;5.17e-21;48!CL:0000766;3.30e-15;69!CL:1000449;3.14e-08;15!CL:0000763;4.05e-08;100!CL:0000094;1.05e-07;8!CL:0002681;3.99e-07;12!CL:0002584;3.99e-07;12!CL:1000497;7.59e-07;17!CL:0002518;7.59e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.02e-41,42;CL:0002057,2.02e-41,42;CL:0000473,1.68e-37,48;CL:0000234,1.68e-37,48;CL:0000766,6.63e-29,72;CL:0002194,2.09e-26,59;CL:0000576,2.09e-26,59;CL:0000040,2.09e-26,59;CL:0000559,2.09e-26,59;CL:0002009,5.38e-25,61;CL:0000839,7.30e-22,66;CL:0000557,2.70e-21,67;CL:0000763,1.81e-19,108;CL:0000049,1.81e-19,108;CL:0000738,4.22e-15,136;CL:0002087,1.48e-14,115;CL:0002032,1.39e-13,161;CL:0000837,1.39e-13,161;CL:0000988,2.32e-13,177;CL:0000037,8.81e-13,168;CL:0002031,8.51e-12,120;CL:0002393,2.27e-08,9;CL:0002397,2.27e-08,9;CL:1000449,6.35e-08,15;CL:0000094,1.06e-07,8;CL:0002320,1.43e-07,361;CL:0000219,2.06e-07,386;CL:0000134,3.39e-07,354;CL:0002681,8.21e-07,12;CL:0002584,8.21e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-29;42!CL:0000049;2.90e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.44e-15!216;UBERON:0002193!3.67e-13!112;UBERON:0002390!4.51e-13!102;UBERON:0003061!4.51e-13!102;UBERON:0002371!8.27e-11!80;UBERON:0001474!4.10e-09!86;UBERON:0002405!9.17e-09!115;UBERON:0002204!1.23e-08!167;UBERON:0002384!2.45e-08!375;UBERON:0004765!2.80e-08!101;UBERON:0001434!2.80e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.14e-08;15!UBERON:0004819;3.14e-08;15!UBERON:0001285;3.14e-08;15!UBERON:0007684;3.14e-08;15!UBERON:0000353;4.35e-08;15!UBERON:0001225;3.99e-07;12!UBERON:0008987;3.99e-07;12 | |||
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|short_description=p2@SHKBP1 | |short_description=p2@SHKBP1 | ||
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Latest revision as of 02:18, 18 September 2015
Short description: | p2@SHKBP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHKBP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 41bp_to_ENST00000446701_5end |
EntrezGene: | SHKBP1 |
HGNC: | 19214 |
UniProt: | B4DUW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.47e-20 | 108 |
hematopoietic system | 2.80e-20 | 98 |
blood island | 2.80e-20 | 98 |
bone marrow | 4.60e-20 | 76 |
immune system | 8.47e-18 | 93 |
skeletal element | 8.77e-18 | 90 |
bone element | 2.19e-17 | 82 |
lateral plate mesoderm | 5.30e-16 | 203 |
skeletal system | 5.99e-15 | 100 |
mesoderm | 4.72e-09 | 315 |
mesoderm-derived structure | 4.72e-09 | 315 |
presumptive mesoderm | 4.72e-09 | 315 |
musculoskeletal system | 1.12e-08 | 167 |
nephron epithelium | 6.35e-08 | 15 |
renal tubule | 6.35e-08 | 15 |
nephron tubule | 6.35e-08 | 15 |
nephron | 6.35e-08 | 15 |
uriniferous tubule | 6.35e-08 | 15 |
nephrogenic mesenchyme | 6.35e-08 | 15 |
parenchyma | 7.83e-08 | 15 |
excretory tube | 3.26e-07 | 16 |
kidney epithelium | 3.26e-07 | 16 |
cortex of kidney | 8.21e-07 | 12 |
renal parenchyma | 8.21e-07 | 12 |