FFCP PHASE1:Hg19::chr11:18655948..18655965,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:18655948..18655965,-
|short_description=p3@SPTY2D1
|description=CAGE_peak_3_at_SPTY2D1_5end
|association_with_transcript=-12bp_to_ENST00000536336_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144108 | |EntrezGene=144108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26818 | |HGNC=26818 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000536336_5end | |||
|cluster_id=chr11:18655948..18655965,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SPTY2D1_5end | |||
|id=chr11:18655948..18655965,- | |||
|ontology_enrichment_celltype=CL:0000766!9.45e-27!76;CL:0002057!2.81e-23!42;CL:0000839!4.21e-23!70;CL:0000557!3.35e-22!71;CL:0000860!6.14e-22!45;CL:0002009!1.02e-21!65;CL:0002194!1.48e-20!63;CL:0000576!1.48e-20!63;CL:0000040!1.48e-20!63;CL:0000559!1.48e-20!63;CL:0000763!1.70e-17!112;CL:0000049!1.70e-17!112;CL:0000738!1.45e-16!140;CL:0002031!1.16e-14!124;CL:0002032!5.28e-12!165;CL:0000837!5.28e-12!165;CL:0002087!5.98e-12!119;CL:0000037!2.99e-11!172;CL:0000566!2.99e-11!172;CL:0000988!2.40e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-21;33!CL:0002057;2.12e-21;33!CL:0000473;5.70e-18;39!CL:0000234;5.70e-18;39!CL:0000576;7.76e-16;48!CL:0000766;1.18e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.05e-29,72;CL:0000839,1.54e-25,66;CL:0000557,8.72e-25,67;CL:0000473,2.74e-24,48;CL:0000234,2.74e-24,48;CL:0002009,3.99e-24,61;CL:0000860,4.51e-24,42;CL:0002057,4.51e-24,42;CL:0002194,6.92e-23,59;CL:0000576,6.92e-23,59;CL:0000040,6.92e-23,59;CL:0000559,6.92e-23,59;CL:0000763,2.15e-18,108;CL:0000049,2.15e-18,108;CL:0000738,2.17e-16,136;CL:0002031,1.83e-14,120;CL:0002087,1.08e-11,115;CL:0002032,1.95e-11,161;CL:0000837,1.95e-11,161;CL:0000037,1.15e-10,168;CL:0000988,7.38e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.76e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.52e-20!102;UBERON:0003061!3.52e-20!102;UBERON:0002371!1.99e-18!80;UBERON:0002193!1.78e-17!112;UBERON:0001474!9.73e-16!86;UBERON:0004765!3.07e-14!101;UBERON:0001434!3.07e-14!101;UBERON:0002405!6.46e-11!115;UBERON:0000926!3.18e-08!448;UBERON:0004120!3.18e-08!448;UBERON:0006603!3.18e-08!448;UBERON:0003081!4.07e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.48e-22,98;UBERON:0003061,8.48e-22,98;UBERON:0002371,1.89e-20,76;UBERON:0002193,7.58e-19,108;UBERON:0001474,2.72e-17,82;UBERON:0002405,1.14e-15,93;UBERON:0004765,1.48e-15,90;UBERON:0001434,4.68e-14,100;UBERON:0003081,6.83e-10,203;UBERON:0000926,7.75e-07,315;UBERON:0004120,7.75e-07,315;UBERON:0006603,7.75e-07,315 | |||
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| ||
|short_description=p3@SPTY2D1 | |||
}} | }} |
Latest revision as of 03:29, 17 September 2015
Short description: | p3@SPTY2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPTY2D1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -12bp_to_ENST00000536336_5end |
EntrezGene: | SPTY2D1 |
HGNC: | 26818 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.05e-29 | 72 |
myeloid lineage restricted progenitor cell | 1.54e-25 | 66 |
granulocyte monocyte progenitor cell | 8.72e-25 | 67 |
defensive cell | 2.74e-24 | 48 |
phagocyte | 2.74e-24 | 48 |
macrophage dendritic cell progenitor | 3.99e-24 | 61 |
classical monocyte | 4.51e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.51e-24 | 42 |
monopoietic cell | 6.92e-23 | 59 |
monocyte | 6.92e-23 | 59 |
monoblast | 6.92e-23 | 59 |
promonocyte | 6.92e-23 | 59 |
myeloid cell | 2.15e-18 | 108 |
common myeloid progenitor | 2.15e-18 | 108 |
leukocyte | 2.17e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.83e-14 | 120 |
nongranular leukocyte | 1.08e-11 | 115 |
hematopoietic oligopotent progenitor cell | 1.95e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-11 | 161 |
hematopoietic stem cell | 1.15e-10 | 168 |
hematopoietic cell | 7.38e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.48e-22 | 98 |
blood island | 8.48e-22 | 98 |
bone marrow | 1.89e-20 | 76 |
hemolymphoid system | 7.58e-19 | 108 |
bone element | 2.72e-17 | 82 |
immune system | 1.14e-15 | 93 |
skeletal element | 1.48e-15 | 90 |
skeletal system | 4.68e-14 | 100 |
lateral plate mesoderm | 6.83e-10 | 203 |
mesoderm | 7.75e-07 | 315 |
mesoderm-derived structure | 7.75e-07 | 315 |
presumptive mesoderm | 7.75e-07 | 315 |