FFCP PHASE1:Hg19::chr19:959112..959138,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:959112..959138,+ | |||
|coexpression_cluster_id=C1459 | |||
|description=CAGE_peak_at_chr19:959112..959138,+ | |description=CAGE_peak_at_chr19:959112..959138,+ | ||
|id=chr19:959112..959138,+ | |id=chr19:959112..959138,+ | ||
|ontology_enrichment_celltype=CL:0000349!8.78e-09!3;CL:0002577!8.78e-09!3 | |ontology_enrichment_celltype=CL:0000349!8.78e-09!3;CL:0002577!8.78e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.14e-27;19!CL:0002577;3.45e-26;3!CL:0002537;2.42e-16;5!CL:0002541;5.13e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.12e-27,19;CL:0002577,4.10e-26,3;CL:0002537,2.42e-16,5;CL:0002541,4.46e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.36e-09;1 | |||
|ontology_enrichment_disease=DOID:1036!1.76e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;8.20e-10;8!DOID:1799;1.10e-09;1!DOID:10165;1.10e-09;1!DOID:1798;1.10e-09;1!DOID:3111;2.08e-09;1!DOID:3603;2.08e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.12e-10,8;DOID:1799,1.06e-09,1;DOID:10165,1.06e-09,1;DOID:1798,1.06e-09,1;DOID:3111,2.08e-09,1;DOID:3603,2.08e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.03e-20!14;UBERON:0000158!2.03e-20!14;UBERON:0000478!6.53e-13!24;UBERON:0003124!7.26e-13!7;UBERON:0001987!1.50e-10!4;UBERON:0004340!1.50e-10!4;UBERON:0002619!1.93e-09!22;UBERON:0000305!2.32e-09!7;UBERON:0001950!1.22e-08!20;UBERON:0001869!2.46e-08!32;UBERON:0004871!4.04e-08!8;UBERON:0000956!4.40e-08!25;UBERON:0000203!4.40e-08!25;UBERON:0002791!5.24e-08!33;UBERON:0002020!1.07e-07!34;UBERON:0003528!1.07e-07!34;UBERON:0001893!1.07e-07!34;UBERON:0001871!3.56e-07!7;UBERON:0000064!3.72e-07!219;UBERON:0000160!5.05e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.54e-27;24!UBERON:0005631;2.95e-21;10!UBERON:0000158;2.95e-21;10!UBERON:0001987;8.33e-20;4!UBERON:0000160;1.99e-16;17!UBERON:0005409;9.27e-13;22!UBERON:0003124;5.13e-12;3!UBERON:0000920;5.13e-12;3!UBERON:0000305;7.91e-12;7!UBERON:0001052;1.69e-09;4!UBERON:0004907;9.13e-08;5!UBERON:0004921;1.43e-07;33!UBERON:0000059;1.46e-07;11!UBERON:0002108;1.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.72e-38,14;UBERON:0000158,6.72e-38,14;UBERON:0003124,5.93e-30,7;UBERON:0000478,2.50e-27,24;UBERON:0001987,9.46e-20,4;UBERON:0004340,9.46e-20,4;UBERON:0000160,2.08e-16,17;UBERON:0000920,4.46e-12,3;UBERON:0000305,7.92e-12,7;UBERON:0004923,3.03e-11,66;UBERON:0005409,3.20e-11,25;UBERON:0004871,2.06e-10,8;UBERON:0001052,1.69e-09,4;UBERON:0004907,9.13e-08,5;UBERON:0000059,1.46e-07,11;UBERON:0002108,1.55e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65746817298322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.27506171471023,9.98612637062982,7.55975733324201,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9488432172667,0,0,0,0,0,0,0,0,0,27.2168712600967,25.5389625516069,39.6237305708009,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0.23056390438806,0,0,7.65602783356607,0,1.5991043280559,0,0,0,1.1279783030859,0.392125068635479,3.02078856556517,2.27704479269022,0.158936578980379,0,0,0.706765357169704,0,0,0,17.7198742030751,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.337017719270924,0,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.546746009922222,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,1.47918486351039,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,3.92860041722134,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0,0,0,0,6.44625975621715,23.7421267332469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,7.86814417814246,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0.339957450954573,0,1.0580536810308,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr19:959112..959138,+ | |short_description=p@chr19:959112..959138,+ | ||
}} | }} |
Latest revision as of 18:47, 27 July 2015
Short description: | p@chr19:959112..959138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:959112..959138, + |
Coexpression cluster: | C1459_rectum_colon_amniotic_Intestinal_small_chorionic_pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.12e-27 | 19 |
placental epithelial cell | 4.10e-26 | 3 |
amnion mesenchymal stem cell | 2.42e-16 | 5 |
chorionic membrane mesenchymal stem cell | 4.46e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.72e-38 | 14 |
membranous layer | 6.72e-38 | 14 |
chorion | 5.93e-30 | 7 |
extraembryonic structure | 2.50e-27 | 24 |
placenta | 9.46e-20 | 4 |
allantois | 9.46e-20 | 4 |
intestine | 2.08e-16 | 17 |
egg chorion | 4.46e-12 | 3 |
amnion | 7.92e-12 | 7 |
organ component layer | 3.03e-11 | 66 |
gastrointestinal system | 3.20e-11 | 25 |
somatic layer of lateral plate mesoderm | 2.06e-10 | 8 |
rectum | 1.69e-09 | 4 |
lower digestive tract | 9.13e-08 | 5 |
large intestine | 1.46e-07 | 11 |
small intestine | 1.55e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.12e-10 | 8 |
islet cell tumor | 1.06e-09 | 1 |
endocrine pancreas cancer | 1.06e-09 | 1 |
pancreatic endocrine carcinoma | 1.06e-09 | 1 |
cystadenocarcinoma | 2.08e-09 | 1 |
mucinous cystadenocarcinoma | 2.08e-09 | 1 |