FFCP PHASE1:Hg19::chr11:2017907..2017914,-: Difference between revisions
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|id=chr11:2017907..2017914,-
|short_description=p32@H19
|description=CAGE_peak_32_at_H19_5end
|association_with_transcript=-106bp_to_ENST00000436715_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-106bp_to_ENST00000436715_5end | |||
|cluster_id=chr11:2017907..2017914,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_32_at_H19_5end | |||
|id=chr11:2017907..2017914,- | |||
|ontology_enrichment_celltype=CL:0000188!1.70e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.36e-23;19!CL:0002577;6.68e-13;3!CL:0002575;6.18e-09;2!CL:0002536;6.67e-09;2!CL:0002537;6.80e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.34e-23,19;CL:0002577,6.69e-13,3;CL:0002575,5.95e-09,2;CL:0002536,6.43e-09,2;CL:0002537,6.89e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.86e-08;2!UBERON:0010056;2.86e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.28e-17!14;UBERON:0000158!2.28e-17!14;UBERON:0001737!1.45e-14!9;UBERON:0000478!5.44e-14!24;UBERON:0003124!1.16e-12!7;UBERON:0001557!2.01e-12!19;UBERON:0004923!5.40e-09!57;UBERON:0003104!4.00e-08!238;UBERON:0009142!4.00e-08!238;UBERON:0001987!4.44e-08!4;UBERON:0004340!4.44e-08!4;UBERON:0000077!9.54e-08!130;UBERON:0004119!1.34e-07!169;UBERON:0000925!1.34e-07!169;UBERON:0006595!1.34e-07!169;UBERON:0004921!1.52e-07!129;UBERON:0004185!1.52e-07!129;UBERON:0000305!7.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.18e-25;24!UBERON:0001737;2.65e-24;9!UBERON:0001557;2.65e-24;9!UBERON:0005631;5.22e-19;10!UBERON:0000158;5.22e-19;10!UBERON:0001987;5.68e-16;4!UBERON:0000305;3.03e-14;7!UBERON:0001723;9.36e-12;3!UBERON:0001033;9.36e-12;3!UBERON:0005090;6.94e-09;2!UBERON:0001630;6.94e-09;2!UBERON:0001134;8.23e-08;16!UBERON:0002036;8.23e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.04e-32,14;UBERON:0000158,2.04e-32,14;UBERON:0000478,3.80e-25,24;UBERON:0001737,2.61e-24,9;UBERON:0001557,8.14e-21,19;UBERON:0003124,4.27e-20,7;UBERON:0001987,5.17e-16,4;UBERON:0004340,5.17e-16,4;UBERON:0000305,3.00e-14,7;UBERON:0004871,2.01e-12,8;UBERON:0001723,7.65e-12,3;UBERON:0001033,7.65e-12,3;UBERON:0010056,7.65e-12,3;UBERON:0005090,6.68e-09,2;UBERON:0001630,6.68e-09,2;UBERON:0000072,1.53e-08,47;UBERON:0004119,3.76e-08,160;UBERON:0000925,3.76e-08,160;UBERON:0006595,3.76e-08,160;UBERON:0004923,3.59e-07,66;UBERON:0000065,3.98e-07,54 | |||
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| ||
|short_description=p32@H19 | |||
}} | }} |
Latest revision as of 06:36, 17 September 2015
Short description: | p32@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -106bp_to_ENST00000436715_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.34e-23 | 19 |
placental epithelial cell | 6.69e-13 | 3 |
central nervous system pericyte | 5.95e-09 | 2 |
amniotic epithelial cell | 6.43e-09 | 2 |
amnion mesenchymal stem cell | 6.89e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.04e-32 | 14 |
membranous layer | 2.04e-32 | 14 |
extraembryonic structure | 3.80e-25 | 24 |
larynx | 2.61e-24 | 9 |
upper respiratory tract | 8.14e-21 | 19 |
chorion | 4.27e-20 | 7 |
placenta | 5.17e-16 | 4 |
allantois | 5.17e-16 | 4 |
amnion | 3.00e-14 | 7 |
somatic layer of lateral plate mesoderm | 2.01e-12 | 8 |
tongue | 7.65e-12 | 3 |
gustatory system | 7.65e-12 | 3 |
future tongue | 7.65e-12 | 3 |
muscle structure | 6.68e-09 | 2 |
muscle organ | 6.68e-09 | 2 |
segment of respiratory tract | 1.53e-08 | 47 |
endoderm-derived structure | 3.76e-08 | 160 |
endoderm | 3.76e-08 | 160 |
presumptive endoderm | 3.76e-08 | 160 |
organ component layer | 3.59e-07 | 66 |
respiratory tract | 3.98e-07 | 54 |