FFCP PHASE1:Hg19::chr1:1260247..1260270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80772 | |EntrezGene=80772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28116 | |HGNC=28116 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TA50 | |UniProt=Q5TA50 | ||
|association_with_transcript=100bp_to_ENST00000343938_5end | |association_with_transcript=100bp_to_ENST00000343938_5end | ||
|cluster_id=chr1:1260247..1260270,+ | |||
|description=CAGE_peak_3_at_GLTPD1_5end | |description=CAGE_peak_3_at_GLTPD1_5end | ||
|id=chr1:1260247..1260270,+ | |id=chr1:1260247..1260270,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.02e-29!254;CL:0000223!1.65e-13!59;CL:0002076!1.11e-10!43 | |ontology_enrichment_celltype=CL:0000066!2.02e-29!254;CL:0000223!1.65e-13!59;CL:0002076!1.11e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.66e-11;42!CL:0002368;1.85e-09;13!CL:0002202;9.87e-08;9!CL:0002632;9.87e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.53e-28,253;CL:0000223,1.57e-19,58;CL:0002076,5.85e-15,42;CL:0002368,2.85e-09,13;CL:0002202,1.30e-07,9;CL:0002632,1.30e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.83e-12;58 | |||
|ontology_enrichment_disease=DOID:305!9.61e-17!106;DOID:0050687!8.63e-13!143;DOID:299!4.42e-08!25;DOID:162!9.60e-08!235;DOID:14566!2.08e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;1.79e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.57e-14,106;DOID:299,1.20e-08,25;DOID:0050687,1.64e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.47e-25!169;UBERON:0000925!8.47e-25!169;UBERON:0006595!8.47e-25!169;UBERON:0004921!1.88e-20!129;UBERON:0004185!1.88e-20!129;UBERON:0001007!8.29e-20!155;UBERON:0001555!8.29e-20!155;UBERON:0007026!8.29e-20!155;UBERON:0000077!1.20e-19!130;UBERON:0001041!1.62e-16!98;UBERON:0005177!3.29e-12!107;UBERON:0005911!3.22e-11!82;UBERON:0009569!3.35e-11!113;UBERON:0001004!3.48e-11!72;UBERON:0000466!9.81e-11!126;UBERON:0003104!2.32e-09!238;UBERON:0009142!2.32e-09!238;UBERON:0002365!6.58e-09!31;UBERON:0002330!6.58e-09!31;UBERON:0000065!1.01e-08!53;UBERON:0002530!3.93e-08!59;UBERON:0005172!6.46e-08!55;UBERON:0005173!6.46e-08!55;UBERON:0000072!1.02e-07!46;UBERON:0000464!3.32e-07!104;UBERON:0003929!4.02e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.90e-10;33!UBERON:0002365;2.67e-09;31!UBERON:0002330;2.67e-09;31!UBERON:0005911;1.32e-08;36!UBERON:0004807;4.45e-08;22!UBERON:0002423;5.23e-08;25!UBERON:0001041;1.18e-07;14!UBERON:0005409;2.36e-07;22!UBERON:0001007;2.92e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.44e-23,160;UBERON:0000925,4.44e-23,160;UBERON:0006595,4.44e-23,160;UBERON:0004921,2.01e-20,118;UBERON:0001007,5.86e-18,145;UBERON:0001555,5.86e-18,145;UBERON:0007026,5.86e-18,145;UBERON:0001041,2.18e-15,87;UBERON:0005177,2.93e-14,101;UBERON:0005911,8.46e-12,82;UBERON:0009569,3.09e-11,112;UBERON:0001004,1.38e-09,74;UBERON:0002365,1.64e-09,31;UBERON:0002330,1.64e-09,31;UBERON:0006554,1.76e-08,47;UBERON:0009856,2.36e-08,26;UBERON:0001008,3.65e-08,48;UBERON:0009497,4.37e-08,25;UBERON:0000015,4.37e-08,25;UBERON:0002423,4.37e-08,25;UBERON:0006235,4.37e-08,25;UBERON:0004161,4.37e-08,25;UBERON:0007499,8.90e-08,25;UBERON:0009854,1.53e-07,23;UBERON:0005172,1.91e-07,54;UBERON:0005173,1.91e-07,54;UBERON:0008835,5.74e-07,22;UBERON:0003894,5.74e-07,22 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0,1.96587149201207,18.8406315352555,1.09220686065086,3.69273769519835,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0.152826811495903,0.57470412614962,0.236132343941038,0,0.383829398097213,0.309632246632152,7.35536979583142,3.0120591877825,4.80680213216824,2.47895041856965,0.995184627411951,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,1.67186495390678,0,0.473447805734733,0,0.557052284425868,1.47302953737419,0.443067789167242,0,1.40900451698243,1.30059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.793165398882963,0.383220493601921,0,0,0.318565414324097,0,0,0.301150238155546,0.639933055772092,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0,0.221729397462564,0.175669571386252,1.57174890597255,4.00724817121796,7.78647329847302,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0.775250277507987,0.35576626268671,0,1.20848795132744,1.52054421143703,1.70843440283719,0,0.81014194788176,0,0,0.112611480483322,0,0.949265659568129,0,0,0,1.74437620857014,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,1.48000529050296,0.311211035399766,0.404132016209064,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.453728732640084,0.179389635688862,0,0.211931901159562,0,0,0,0.37223371266318,0,0.292311015483596,0,0,0,0,0.10075209822764,0.169560592310488,1.35282597214308,3.27295344709002,2.00763216772303,0.731842236777572,0.795178609928912,0.348581828608555,0.518305275076852,1.00928340350251,0.36497735907583,0,0,0,0.464367928031979,0,0.946454400318751,0.168584690078102,1.68707720918437,0.882351781859152,0.871517776369625,0.949082476444386,1.21348177344148,0.784885860501384,1.53898862778556,2.21446636387394,0,0.4115740113314,1.47008711385542,6.33775174109154,5.89696330006576,5.90789906681404,0.441463099414651,1.22988438543114,0.171567810298526,2.08525542276389,4.49607013030478,2.6137532827024,0.555530670951178,0,0,0,0,0,0.288732895522148,0,0.570762456703795,3.95102198979638,8.58486162094873,0,0,0,1.87467667973554,1.6798212819886,2.26840155587818,0.895585227028483,0.871901815541886,3.4504441124869,0,0,0.207328115540772,0,0.12624243342638,0,0.381988425558278,0,3.4214489204541,0,0,0.571652865261156,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.799266537048298,0.142977993658148,0,0.823240336780769,0,0,0,0.602878754119172,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0.112085143993527,0,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,1.49801404789436,0,0.828831026872071,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.368738337083406,0,0.195801157462741,0,0,0.215714200818617,0.106727557803444,3.03127571446259,3.32870879020994,4.23346410661552,0,0,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,1.57117284469109,4.0101294060657,3.95948252424354,0.229628896329213,0,0.131124414959424,3.15839729035188,0.924184045252977,2.35304930753057,1.46139224653261,0,0,0,0,0,0.270946437543853,3.01013864312912,1.27438136522519,4.15538004464362,0.895499018888713,0,0.261435451024901,0,0,0,2.36994326789761,0.27470839445503,0.082509499920588,2.87132768998086,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,1.15699440752685,3.84380134730212,0.765676274967505,4.14746901507755,0,0,0,0,0,0.869932992075073,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0.808729926293264,0,0,0.48763373908959,0.731140468893853,0,0,0.141405431953713,0,0.551365343546124,0,1.31535265576129,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,1.34710957815717,6.03272047982209,1.08890984861323,2.2594512186427,4.3050537267123,5.05414427002877,3.54744122829341,1.1486170010348,0.507447609232169,0,0,0.476463550915578,0.822724546172388,0,0,0.79312517629427,0.320472213382419,0.962479855263359,1.22520107990516,0,0,0,0,0.199579371432817,0.5745161103971,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0.19538809540204,0.278406173895242,1.23087398947712,0,0,0,6.73705945469591,0.293016358543788,0.36408156524854,0.222886768554957,0,3.34242278632766,3.26661148915902,0.614321404198464,0,0,0,0.329607748453519,0.211125408127993,0.19924798825107,1.65770349318689,0.503865495708552,0,0.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| ||
|short_description=p3@GLTPD1 | |short_description=p3@GLTPD1 | ||
}} | }} |
Latest revision as of 14:15, 16 September 2015
Short description: | p3@GLTPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLTPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENST00000343938_5end |
EntrezGene: | GLTPD1 |
HGNC: | 28116 |
UniProt: | Q5TA50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.53e-28 | 253 |
endodermal cell | 1.57e-19 | 58 |
endo-epithelial cell | 5.85e-15 | 42 |
respiratory epithelial cell | 2.85e-09 | 13 |
epithelial cell of tracheobronchial tree | 1.30e-07 | 9 |
epithelial cell of lower respiratory tract | 1.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.44e-23 | 160 |
endoderm | 4.44e-23 | 160 |
presumptive endoderm | 4.44e-23 | 160 |
subdivision of digestive tract | 2.01e-20 | 118 |
digestive system | 5.86e-18 | 145 |
digestive tract | 5.86e-18 | 145 |
primitive gut | 5.86e-18 | 145 |
foregut | 2.18e-15 | 87 |
trunk region element | 2.93e-14 | 101 |
endo-epithelium | 8.46e-12 | 82 |
subdivision of trunk | 3.09e-11 | 112 |
respiratory system | 1.38e-09 | 74 |
exocrine gland | 1.64e-09 | 31 |
exocrine system | 1.64e-09 | 31 |
urinary system structure | 1.76e-08 | 47 |
sac | 2.36e-08 | 26 |
renal system | 3.65e-08 | 48 |
epithelium of foregut-midgut junction | 4.37e-08 | 25 |
anatomical boundary | 4.37e-08 | 25 |
hepatobiliary system | 4.37e-08 | 25 |
foregut-midgut junction | 4.37e-08 | 25 |
septum transversum | 4.37e-08 | 25 |
epithelial sac | 8.90e-08 | 25 |
digestive tract diverticulum | 1.53e-07 | 23 |
abdomen element | 1.91e-07 | 54 |
abdominal segment element | 1.91e-07 | 54 |
hepatic diverticulum | 5.74e-07 | 22 |
liver primordium | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.57e-14 | 106 |
adenocarcinoma | 1.20e-08 | 25 |
cell type cancer | 1.64e-08 | 143 |