FFCP PHASE1:Hg19::chr11:34642656..34642667,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:34642656..34642667,+
|short_description=p2@EHF
|description=CAGE_peak_2_at_EHF_5end
|association_with_transcript=0bp_to_ENST00000257831,uc001mvr.1,uc009yk...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26298 | |EntrezGene=26298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3246 | |HGNC=3246 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZC4 | |UniProt=Q9NZC4 | ||
|association_with_transcript=0bp_to_ENST00000257831,uc001mvr.1,uc009yke.1_5end | |||
|cluster_id=chr11:34642656..34642667,+ | |||
|description=CAGE_peak_2_at_EHF_5end | |||
|id=chr11:34642656..34642667,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.78e-23!43;CL:0000223!6.21e-17!59;CL:0000066!3.20e-13!254;CL:0002251!3.03e-12!21;CL:0002368!1.48e-10!13;CL:0002159!4.81e-07!13;CL:0002202!8.99e-07!9;CL:0002632!8.99e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.65e-20;42!CL:0002251;3.38e-15;20!CL:0002368;1.39e-11;13!CL:0002159;3.29e-08;14!CL:0002202;6.73e-07;9!CL:0002632;6.73e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.66e-27,42;CL:0000223,4.39e-18,58;CL:0000066,3.83e-17,253;CL:0002251,3.71e-15,20;CL:0002368,1.58e-11,13;CL:0002159,3.74e-08,14;CL:0002202,7.79e-07,9;CL:0002632,7.79e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.02e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!3.65e-15!14;DOID:305!7.79e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.51e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.15e-19,14;DOID:305,2.03e-11,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.85e-24!169;UBERON:0000925!3.85e-24!169;UBERON:0006595!3.85e-24!169;UBERON:0001007!1.67e-19!155;UBERON:0001555!1.67e-19!155;UBERON:0007026!1.67e-19!155;UBERON:0000161!2.91e-16!35;UBERON:0004921!4.06e-15!129;UBERON:0004185!4.06e-15!129;UBERON:0001004!8.72e-15!72;UBERON:0000077!3.12e-13!130;UBERON:0000166!5.59e-13!21;UBERON:0003104!5.92e-11!238;UBERON:0009142!5.92e-11!238;UBERON:0005911!7.64e-11!82;UBERON:0000165!1.43e-10!28;UBERON:0000930!1.43e-10!28;UBERON:0000464!6.76e-10!104;UBERON:0000466!3.13e-09!126;UBERON:0001041!3.42e-09!98;UBERON:0000481!5.41e-09!347;UBERON:0000922!6.93e-09!612;UBERON:0000065!1.06e-08!53;UBERON:0002050!1.31e-08!605;UBERON:0005423!1.31e-08!605;UBERON:0002294!2.20e-08!7;UBERON:0001173!2.20e-08!7;UBERON:0004912!2.20e-08!7;UBERON:0000923!3.04e-08!604;UBERON:0005291!3.04e-08!604;UBERON:0006598!3.04e-08!604;UBERON:0002532!3.04e-08!604;UBERON:0005178!6.36e-08!34;UBERON:0002224!6.36e-08!34;UBERON:0000467!1.06e-07!625;UBERON:0000480!1.28e-07!626;UBERON:0005181!1.55e-07!35;UBERON:0001044!2.14e-07!6;UBERON:0003293!2.14e-07!6;UBERON:0003294!2.14e-07!6;UBERON:0010047!2.14e-07!6;UBERON:0000167!2.14e-07!6;UBERON:0005153!3.39e-07!37;UBERON:0000468!4.53e-07!659;UBERON:0000344!5.69e-07!12;UBERON:0000062!6.70e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;7.37e-13;19!UBERON:0000166;7.37e-13;19!UBERON:0004921;1.95e-12;33!UBERON:0000165;1.22e-11;28!UBERON:0001555;1.01e-09;54!UBERON:0001041;2.36e-09;14!UBERON:0001044;4.32e-09;6!UBERON:0003293;4.32e-09;6!UBERON:0003294;4.32e-09;6!UBERON:0010047;4.32e-09;6!UBERON:0003408;4.32e-09;6!UBERON:0000167;4.32e-09;6!UBERON:0000344;1.35e-08;20!UBERON:0000974;1.45e-08;6!UBERON:0002294;2.77e-08;7!UBERON:0001173;2.77e-08;7!UBERON:0005178;4.45e-08;34!UBERON:0002224;4.45e-08;34!UBERON:0001004;1.93e-07;65!UBERON:0000365;2.70e-07;5!UBERON:0000058;3.20e-07;10!UBERON:0005181;4.13e-07;35!UBERON:0000486;6.44e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.22e-23,160;UBERON:0000925,8.22e-23,160;UBERON:0006595,8.22e-23,160;UBERON:0001007,6.66e-19,145;UBERON:0001555,6.66e-19,145;UBERON:0007026,6.66e-19,145;UBERON:0000161,1.24e-16,36;UBERON:0004921,5.75e-16,118;UBERON:0001004,1.12e-15,74;UBERON:0000166,2.94e-14,22;UBERON:0000165,4.80e-11,29;UBERON:0000930,4.80e-11,29;UBERON:0001041,2.72e-09,87;UBERON:0003102,4.41e-09,99;UBERON:0001044,4.72e-09,6;UBERON:0003293,4.72e-09,6;UBERON:0003294,4.72e-09,6;UBERON:0010047,4.72e-09,6;UBERON:0000167,4.72e-09,6;UBERON:0000065,4.96e-09,54;UBERON:0005178,5.54e-09,34;UBERON:0002224,5.54e-09,34;UBERON:0005181,1.37e-08,35;UBERON:0000344,1.39e-08,20;UBERON:0000915,2.70e-08,52;UBERON:0005911,9.43e-08,82;UBERON:0000153,1.81e-07,62;UBERON:0007811,1.81e-07,62;UBERON:0000365,2.86e-07,5;UBERON:0000033,4.09e-07,56;UBERON:0000922,7.98e-07,592 | |||
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| ||
|short_description=p2@EHF | |||
}} | }} |
Latest revision as of 17:57, 17 September 2015
Short description: | p2@EHF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EHF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000257831, uc001mvr.1, uc009yke.1_5end |
EntrezGene: | EHF |
HGNC: | 3246 |
UniProt: | Q9NZC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.66e-27 | 42 |
endodermal cell | 4.39e-18 | 58 |
epithelial cell | 3.83e-17 | 253 |
epithelial cell of alimentary canal | 3.71e-15 | 20 |
respiratory epithelial cell | 1.58e-11 | 13 |
general ecto-epithelial cell | 3.74e-08 | 14 |
epithelial cell of tracheobronchial tree | 7.79e-07 | 9 |
epithelial cell of lower respiratory tract | 7.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.22e-23 | 160 |
endoderm | 8.22e-23 | 160 |
presumptive endoderm | 8.22e-23 | 160 |
digestive system | 6.66e-19 | 145 |
digestive tract | 6.66e-19 | 145 |
primitive gut | 6.66e-19 | 145 |
orifice | 1.24e-16 | 36 |
subdivision of digestive tract | 5.75e-16 | 118 |
respiratory system | 1.12e-15 | 74 |
oral opening | 2.94e-14 | 22 |
mouth | 4.80e-11 | 29 |
stomodeum | 4.80e-11 | 29 |
foregut | 2.72e-09 | 87 |
surface structure | 4.41e-09 | 99 |
saliva-secreting gland | 4.72e-09 | 6 |
gland of oral region | 4.72e-09 | 6 |
gland of foregut | 4.72e-09 | 6 |
oral gland | 4.72e-09 | 6 |
oral cavity | 4.72e-09 | 6 |
respiratory tract | 4.96e-09 | 54 |
thoracic cavity element | 5.54e-09 | 34 |
thoracic cavity | 5.54e-09 | 34 |
thoracic segment organ | 1.37e-08 | 35 |
mucosa | 1.39e-08 | 20 |
thoracic segment of trunk | 2.70e-08 | 52 |
endo-epithelium | 9.43e-08 | 82 |
anterior region of body | 1.81e-07 | 62 |
craniocervical region | 1.81e-07 | 62 |
urothelium | 2.86e-07 | 5 |
head | 4.09e-07 | 56 |
embryo | 7.98e-07 | 592 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.15e-19 | 14 |
carcinoma | 2.03e-11 | 106 |