FFCP PHASE1:Hg19::chr15:63334697..63334708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:63334697..63334708,- | |||
|description=CAGE_peak_at_chr15:63334697..63334708,- | |description=CAGE_peak_at_chr15:63334697..63334708,- | ||
|id=chr15:63334697..63334708,- | |id=chr15:63334697..63334708,- | ||
|ontology_enrichment_celltype=CL:0000359!2.41e-08!32;CL:1000497!5.83e-07!18;CL:0002518!5.83e-07!18 | |ontology_enrichment_celltype=CL:0000359!2.41e-08!32;CL:1000497!5.83e-07!18;CL:0002518!5.83e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.13e-21;3!CL:0002536;1.46e-14;2!CL:0000349;9.26e-13;19!CL:0000064;5.17e-10;3!CL:0000067;5.17e-10;3!CL:0005012;5.17e-10;3!CL:0002304;5.17e-10;3!CL:0002594;1.01e-07;4!CL:1000449;1.22e-07;15!CL:1000507;8.71e-07;10!CL:1000494;8.71e-07;10!CL:1000497;9.44e-07;17!CL:0002518;9.44e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.15e-22,3;CL:0002536,9.02e-15,2;CL:0000349,6.98e-13,19;CL:0000064,5.94e-10,3;CL:0000067,5.94e-10,3;CL:0005012,5.94e-10,3;CL:0002304,5.94e-10,3;CL:0002594,1.05e-07,4;CL:1000449,1.57e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.22e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;3.96e-08;1!DOID:10165;3.96e-08;1!DOID:1798;3.96e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.41e-08,1;DOID:10165,4.41e-08,1;DOID:1798,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.09e-09!14;UBERON:0000158!7.09e-09!14;UBERON:0003103!4.17e-08!69;UBERON:0002113!2.03e-07!27;UBERON:0003918!2.03e-07!27;UBERON:0005095!2.03e-07!27;UBERON:0007687!2.03e-07!27;UBERON:0003124!3.65e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.08e-16;4!UBERON:0001778;5.17e-10;3!UBERON:0001775;5.17e-10;3!UBERON:0000478;5.41e-10;24!UBERON:0000305;1.58e-09;7!UBERON:0002084;1.22e-08;1!UBERON:0002082;1.22e-08;1!UBERON:0000488;1.01e-07;4!UBERON:0001310;1.01e-07;4!UBERON:0006555;1.22e-07;15!UBERON:0004819;1.22e-07;15!UBERON:0001285;1.22e-07;15!UBERON:0007684;1.22e-07;15!UBERON:0005631;8.36e-07;10!UBERON:0000158;8.36e-07;10!UBERON:0004211;8.71e-07;10!UBERON:0009773;8.71e-07;10!UBERON:0001231;8.71e-07;10!UBERON:0004810;8.71e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.16e-17,14;UBERON:0000158,1.16e-17,14;UBERON:0001987,1.49e-16,4;UBERON:0004340,1.49e-16,4;UBERON:0006554,1.54e-10,47;UBERON:0001008,2.74e-10,48;UBERON:0000478,4.34e-10,24;UBERON:0001778,5.94e-10,3;UBERON:0001775,5.94e-10,3;UBERON:0003124,1.11e-09,7;UBERON:0000305,1.29e-09,7;UBERON:0002084,1.13e-08,1;UBERON:0002082,1.13e-08,1;UBERON:0010226,1.13e-08,1;UBERON:0004871,1.79e-08,8;UBERON:0001310,1.05e-07,4;UBERON:0000488,1.12e-07,4;UBERON:0004211,1.57e-07,15;UBERON:0009773,1.57e-07,15;UBERON:0001231,1.57e-07,15;UBERON:0001285,1.57e-07,15;UBERON:0007684,1.57e-07,15;UBERON:0004208,1.57e-07,15;UBERON:0006555,4.59e-07,16;UBERON:0004819,4.59e-07,16 | |||
|phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,2.09340350391728,1.52908960491121,1.58260186937072,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,1.03988298880475,1.55210578223795,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0.286836620748814,0,0,1.06748995729705,2.22000793575444,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0,0,0,0,0,0,0.352226082707465,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.99972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0.343143423810856,0,0,0,2.12189300012382,1.66435439510497,2.41912234663744,0.496215615637554,0.61384789315225,0.280660094433074,0,0,0.804269605718038,0,0,0.177561725313127,0,0,0.116210378459959,0,1.60405176242628,0,0,0,0,0,0.0770153371044148,3.13739907670742,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0,1.11937377361089,0,0,0,1.96808787419823,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.9266210955196,2.28999818787186,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0.438450885253763,0,0,1.21746226177622,0.30982349809975,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0.43050537267123,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83018765915069,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0.46112780877612,0.359030577639089,0.651884231532048,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,2.98578579323551,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,1.78537165953498,0.671834724867263,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0,0,0,0.209818352539992,0,0,0.383830394638891,0,3.31045985182716,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0.701139929541673,0,0,0,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.694567422971502,0.244736704506468,3.22359913946677,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,10.1596821460302,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0.26721740526556,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,2.09340350391728,1.52908960491121,1.58260186937072,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,1.03988298880475,1.55210578223795,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0.286836620748814,0,0,1.06748995729705,2.22000793575444,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0,0,0,0,0,0,0.352226082707465,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.99972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0.343143423810856,0,0,0,2.12189300012382,1.66435439510497,2.41912234663744,0.496215615637554,0.61384789315225,0.280660094433074,0,0,0.804269605718038,0,0,0.177561725313127,0,0,0.116210378459959,0,1.60405176242628,0,0,0,0,0,0.0770153371044148,3.13739907670742,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0,1.11937377361089,0,0,0,1.96808787419823,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.9266210955196,2.28999818787186,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0.438450885253763,0,0,1.21746226177622,0.30982349809975,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0.43050537267123,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83018765915069,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0.46112780877612,0.359030577639089,0.651884231532048,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,2.98578579323551,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,1.78537165953498,0.671834724867263,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0,0,0,0.209818352539992,0,0,0.383830394638891,0,3.31045985182716,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0.701139929541673,0,0,0,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.694567422971502,0.244736704506468,3.22359913946677,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,10.1596821460302,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0.26721740526556,0.643264296743914,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:63334697..63334708,- | |short_description=p@chr15:63334697..63334708,- | ||
}} | }} |
Latest revision as of 03:10, 25 July 2015
Short description: | p@chr15:63334697..63334708, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:63334697..63334708, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.15e-22 | 3 |
amniotic epithelial cell | 9.02e-15 | 2 |
extraembryonic cell | 6.98e-13 | 19 |
ciliated cell | 5.94e-10 | 3 |
ciliated epithelial cell | 5.94e-10 | 3 |
multi-ciliated epithelial cell | 5.94e-10 | 3 |
non-pigmented ciliary epithelial cell | 5.94e-10 | 3 |
smooth muscle cell of the umbilical artery | 1.05e-07 | 4 |
epithelial cell of nephron | 1.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.16e-17 | 14 |
membranous layer | 1.16e-17 | 14 |
placenta | 1.49e-16 | 4 |
allantois | 1.49e-16 | 4 |
urinary system structure | 1.54e-10 | 47 |
renal system | 2.74e-10 | 48 |
extraembryonic structure | 4.34e-10 | 24 |
ciliary epithelium | 5.94e-10 | 3 |
ciliary body | 5.94e-10 | 3 |
chorion | 1.11e-09 | 7 |
amnion | 1.29e-09 | 7 |
heart left ventricle | 1.13e-08 | 1 |
cardiac ventricle | 1.13e-08 | 1 |
future cardiac ventricle | 1.13e-08 | 1 |
somatic layer of lateral plate mesoderm | 1.79e-08 | 8 |
umbilical artery | 1.05e-07 | 4 |
atypical epithelium | 1.12e-07 | 4 |
nephron epithelium | 1.57e-07 | 15 |
renal tubule | 1.57e-07 | 15 |
nephron tubule | 1.57e-07 | 15 |
nephron | 1.57e-07 | 15 |
uriniferous tubule | 1.57e-07 | 15 |
nephrogenic mesenchyme | 1.57e-07 | 15 |
excretory tube | 4.59e-07 | 16 |
kidney epithelium | 4.59e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.41e-08 | 1 |
endocrine pancreas cancer | 4.41e-08 | 1 |
pancreatic endocrine carcinoma | 4.41e-08 | 1 |