FFCP PHASE1:Hg19::chr1:209601486..209601506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209601486..209601506,+ | |||
|coexpression_cluster_id=C1848 | |||
|description=CAGE_peak_at_chr1:209601486..209601506,+ | |description=CAGE_peak_at_chr1:209601486..209601506,+ | ||
|id=chr1:209601486..209601506,+ | |id=chr1:209601486..209601506,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.98e-31!43;CL:0000066!1.36e-23!254;CL:0000223!8.05e-23!59;CL:0002368!1.42e-20!13;CL:0002159!7.67e-17!13;CL:0002251!6.20e-16!21;CL:0002077!2.09e-13!33;CL:0000244!1.67e-12!4;CL:0000731!1.67e-12!4;CL:0000076!1.94e-12!62;CL:0002202!4.26e-11!9;CL:0002632!4.26e-11!9;CL:0002328!1.95e-09!3;CL:0000068!2.50e-09!3;CL:0000069!2.50e-09!3;CL:0000307!2.50e-09!3;CL:0000377!2.50e-09!3;CL:0002621!4.46e-09!3;CL:0000362!5.19e-09!8;CL:0000622!5.52e-09!5;CL:0000240!3.84e-08!6;CL:0000311!3.84e-08!6;CL:0000079!3.84e-08!6;CL:0000237!3.84e-08!6;CL:0000036!3.84e-08!6;CL:0000357!3.84e-08!6;CL:0000114!3.84e-08!6;CL:0000220!1.32e-07!246;CL:0000154!1.76e-07!6;CL:0002321!1.80e-07!248;CL:0000575!2.97e-07!2;CL:0000317!6.30e-07!2;CL:1000448!6.30e-07!2;CL:0002308!6.30e-07!2;CL:0002140!6.30e-07!2 | |ontology_enrichment_celltype=CL:0002076!3.98e-31!43;CL:0000066!1.36e-23!254;CL:0000223!8.05e-23!59;CL:0002368!1.42e-20!13;CL:0002159!7.67e-17!13;CL:0002251!6.20e-16!21;CL:0002077!2.09e-13!33;CL:0000244!1.67e-12!4;CL:0000731!1.67e-12!4;CL:0000076!1.94e-12!62;CL:0002202!4.26e-11!9;CL:0002632!4.26e-11!9;CL:0002328!1.95e-09!3;CL:0000068!2.50e-09!3;CL:0000069!2.50e-09!3;CL:0000307!2.50e-09!3;CL:0000377!2.50e-09!3;CL:0002621!4.46e-09!3;CL:0000362!5.19e-09!8;CL:0000622!5.52e-09!5;CL:0000240!3.84e-08!6;CL:0000311!3.84e-08!6;CL:0000079!3.84e-08!6;CL:0000237!3.84e-08!6;CL:0000036!3.84e-08!6;CL:0000357!3.84e-08!6;CL:0000114!3.84e-08!6;CL:0000220!1.32e-07!246;CL:0000154!1.76e-07!6;CL:0002321!1.80e-07!248;CL:0000575!2.97e-07!2;CL:0000317!6.30e-07!2;CL:1000448!6.30e-07!2;CL:0002308!6.30e-07!2;CL:0002140!6.30e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.32e-35;13!CL:0002076;5.02e-29;42!CL:0002159;1.81e-26;14!CL:0000244;3.20e-20;4!CL:0000731;3.20e-20;4!CL:0002202;1.67e-18;9!CL:0002632;1.67e-18;9!CL:0002328;6.32e-15;3!CL:0000307;7.11e-15;3!CL:0002621;2.41e-14;3!CL:0000240;2.81e-13;6!CL:0000311;2.81e-13;6!CL:0000079;2.81e-13;6!CL:0000237;2.81e-13;6!CL:0000362;3.12e-13;9!CL:0002077;5.94e-13;34!CL:0000575;2.84e-11;2!CL:0000317;1.06e-10;2!CL:1000448;1.06e-10;2!CL:0002308;1.06e-10;2!CL:0002140;1.06e-10;2!CL:0002251;1.41e-10;20!CL:0000312;3.18e-09;5!CL:0000622;4.83e-09;5!CL:0000154;1.32e-07;6!CL:0002231;3.13e-07;3!CL:0002166;3.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.51e-36,42;CL:0002368,7.88e-35,13;CL:0000223,1.07e-27,58;CL:0002159,1.96e-26,14;CL:0000066,2.90e-22,253;CL:0000244,3.21e-20,4;CL:0000731,3.21e-20,4;CL:0002202,1.70e-18,9;CL:0002632,1.70e-18,9;CL:0002077,5.26e-15,34;CL:0002328,5.48e-15,3;CL:0000068,8.40e-15,3;CL:0000069,8.40e-15,3;CL:0000307,8.40e-15,3;CL:0000377,8.40e-15,3;CL:0002621,2.25e-14,3;CL:0000240,3.04e-13,6;CL:0000311,3.04e-13,6;CL:0000079,3.04e-13,6;CL:0000237,3.04e-13,6;CL:0000036,3.04e-13,6;CL:0000357,3.04e-13,6;CL:0000114,3.04e-13,6;CL:0000362,3.25e-13,9;CL:0000575,2.84e-11,2;CL:0002321,2.86e-11,250;CL:0000317,1.01e-10,2;CL:1000448,1.01e-10,2;CL:0002308,1.01e-10,2;CL:0002140,1.01e-10,2;CL:0002251,1.54e-10,20;CL:0000312,3.41e-09,5;CL:0000622,5.48e-09,5;CL:0000076,2.07e-08,63;CL:0000154,1.46e-07,6;CL:0002231,3.08e-07,3;CL:0002166,4.08e-07,3;CL:0000221,5.67e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000223;1.29e-15;58!CL:0000377;7.11e-15;3!CL:0000357;2.81e-13;6!CL:0000114;2.81e-13;6 | |||
|ontology_enrichment_disease=DOID:1749!3.92e-24!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.43e-18!72;UBERON:0000166!3.24e-15!21;UBERON:0000161!3.70e-15!35;UBERON:0000365!1.01e-14!5;UBERON:0004119!4.71e-14!169;UBERON:0000925!4.71e-14!169;UBERON:0006595!4.71e-14!169;UBERON:0003729!1.62e-13!5;UBERON:0000165!6.07e-13!28;UBERON:0000930!6.07e-13!28;UBERON:0005910!3.43e-12!6;UBERON:0000065!7.07e-12!53;UBERON:0003102!2.78e-11!95;UBERON:0003343!9.90e-11!4;UBERON:0004785!9.90e-11!4;UBERON:0000344!5.08e-10!12;UBERON:0004815!1.95e-09!3;UBERON:0002031!1.95e-09!3;UBERON:0001949!4.46e-09!3;UBERON:0007196!4.92e-09!14;UBERON:0001558!4.92e-09!14;UBERON:0001444!5.45e-09!48;UBERON:0000974!1.26e-08!10;UBERON:0001007!2.73e-08!155;UBERON:0001555!2.73e-08!155;UBERON:0007026!2.73e-08!155;UBERON:0000072!5.92e-08!46;UBERON:0001723!6.32e-08!3;UBERON:0001033!6.32e-08!3;UBERON:0010056!6.32e-08!3;UBERON:0005178!1.58e-07!34;UBERON:0002224!1.58e-07!34;UBERON:0006562!1.78e-07!11;UBERON:0005181!3.02e-07!35;UBERON:0002185!3.74e-07!4;UBERON:0002419!6.30e-07!2;UBERON:0007771!6.30e-07!2;UBERON:0003297!6.30e-07!2;UBERON:0001821!6.30e-07!2;UBERON:0003487!6.30e-07!2;UBERON:0001820!6.30e-07!2;UBERON:0005089!6.30e-07!2;UBERON:0005088!6.30e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;9.65e-19;12!UBERON:0000365;3.34e-16;5!UBERON:0004815;6.32e-15;3!UBERON:0002031;6.32e-15;3!UBERON:0001949;2.41e-14;3!UBERON:0005910;1.61e-13;6!UBERON:0007196;7.30e-11;15!UBERON:0001558;7.30e-11;15!UBERON:0002419;1.06e-10;2!UBERON:0007771;1.06e-10;2!UBERON:0003297;1.06e-10;2!UBERON:0001821;1.06e-10;2!UBERON:0003487;1.06e-10;2!UBERON:0001820;1.06e-10;2!UBERON:0002185;3.81e-09;5!UBERON:0005911;3.85e-09;36!UBERON:0003729;9.01e-09;13!UBERON:0010371;1.96e-08;31!UBERON:0001003;8.01e-08;15!UBERON:0007376;8.01e-08;15!UBERON:0005178;1.00e-07;34!UBERON:0002224;1.00e-07;34!UBERON:0005181;2.85e-07;35!UBERON:0001043;2.94e-07;3!UBERON:0004807;4.45e-07;22!UBERON:0000065;5.88e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.34e-16,5;UBERON:0004815,5.48e-15,3;UBERON:0002031,5.48e-15,3;UBERON:0001949,2.25e-14,3;UBERON:0005910,1.62e-13,6;UBERON:0004119,2.08e-11,160;UBERON:0000925,2.08e-11,160;UBERON:0006595,2.08e-11,160;UBERON:0003102,2.74e-11,99;UBERON:0007196,7.37e-11,15;UBERON:0001558,7.37e-11,15;UBERON:0001004,7.45e-11,74;UBERON:0002419,1.01e-10,2;UBERON:0007771,1.01e-10,2;UBERON:0003297,1.01e-10,2;UBERON:0001821,1.01e-10,2;UBERON:0003487,1.01e-10,2;UBERON:0001820,1.01e-10,2;UBERON:0005089,1.01e-10,2;UBERON:0005088,1.01e-10,2;UBERON:0002185,3.51e-09,5;UBERON:0003729,9.01e-09,13;UBERON:0001003,8.19e-08,15;UBERON:0007376,8.19e-08,15;UBERON:0007383,8.19e-08,15;UBERON:0005178,1.13e-07,34;UBERON:0002224,1.13e-07,34;UBERON:0005181,2.03e-07,35;UBERON:0001043,3.38e-07,3;UBERON:0009143,3.38e-07,3;UBERON:0000065,5.80e-07,54 | |||
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| ||
|short_description=p@chr1:209601486..209601506,+ | |short_description=p@chr1:209601486..209601506,+ | ||
}} | }} |
Latest revision as of 03:17, 28 July 2015
Short description: | p@chr1:209601486..209601506, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209601486..209601506, + |
Coexpression cluster: | C1848_Corneal_Keratinocyte_Small_Urothelial_Esophageal_Tracheal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 3.34e-16 | 5 |
lower respiratory tract epithelium | 5.48e-15 | 3 |
epithelium of bronchus | 5.48e-15 | 3 |
gingival epithelium | 2.25e-14 | 3 |
transitional epithelium | 1.62e-13 | 6 |
endoderm-derived structure | 2.08e-11 | 160 |
endoderm | 2.08e-11 | 160 |
presumptive endoderm | 2.08e-11 | 160 |
surface structure | 2.74e-11 | 99 |
tracheobronchial tree | 7.37e-11 | 15 |
lower respiratory tract | 7.37e-11 | 15 |
respiratory system | 7.45e-11 | 74 |
skin gland | 1.01e-10 | 2 |
epidermis gland | 1.01e-10 | 2 |
gland of integumental system | 1.01e-10 | 2 |
sebaceous gland | 1.01e-10 | 2 |
skin sebaceous gland | 1.01e-10 | 2 |
sweat gland | 1.01e-10 | 2 |
sweat gland placode | 1.01e-10 | 2 |
sebaceous gland placode | 1.01e-10 | 2 |
bronchus | 3.51e-09 | 5 |
mouth mucosa | 9.01e-09 | 13 |
skin epidermis | 8.19e-08 | 15 |
outer epithelium | 8.19e-08 | 15 |
enveloping layer of ectoderm | 8.19e-08 | 15 |
thoracic cavity element | 1.13e-07 | 34 |
thoracic cavity | 1.13e-07 | 34 |
thoracic segment organ | 2.03e-07 | 35 |
esophagus | 3.38e-07 | 3 |
esophageal region | 3.38e-07 | 3 |
respiratory tract | 5.80e-07 | 54 |