FFCP PHASE1:Hg19::chr1:237957220..237957263,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:237957220..237957263,+ | |||
|coexpression_cluster_id=C307 | |||
|description=CAGE_peak_at_chr1:237957220..237957263,+ | |description=CAGE_peak_at_chr1:237957220..237957263,+ | ||
|id=chr1:237957220..237957263,+ | |id=chr1:237957220..237957263,+ | ||
|ontology_enrichment_celltype=CL:0000764!1.84e-07!2;CL:0000765!1.84e-07!2;CL:0000050!1.84e-07!2;CL:0000038!1.84e-07!2;CL:0000558!1.84e-07!2;CL:0000547!1.84e-07!2;CL:0000549!1.84e-07!2;CL:0000550!1.84e-07!2;CL:0000552!1.84e-07!2 | |ontology_enrichment_celltype=CL:0000764!1.84e-07!2;CL:0000765!1.84e-07!2;CL:0000050!1.84e-07!2;CL:0000038!1.84e-07!2;CL:0000558!1.84e-07!2;CL:0000547!1.84e-07!2;CL:0000549!1.84e-07!2;CL:0000550!1.84e-07!2;CL:0000552!1.84e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.26e-18;1!UBERON:0005062;2.59e-17;4!UBERON:0007284;2.59e-17;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.66e-18;1!DOID:8692;1.13e-11;31!DOID:1036;2.16e-09;8!DOID:1240;2.34e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.66e-18,1;DOID:8692,1.36e-13,31;DOID:1240,8.15e-11,39;DOID:1036,2.16e-09,8;DOID:2531,2.85e-08,51;DOID:0060083,2.85e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-31!115;UBERON:0000178!2.45e-10!15;UBERON:0000179!2.45e-10!15;UBERON:0000463!2.45e-10!15;UBERON:0002771!6.08e-10!3;UBERON:0002619!1.38e-09!22;UBERON:0001869!2.42e-09!32;UBERON:0002020!1.00e-08!34;UBERON:0003528!1.00e-08!34;UBERON:0001893!1.11e-08!34;UBERON:0001950!2.16e-08!20;UBERON:0000200!2.43e-08!6;UBERON:0000956!2.71e-08!25;UBERON:0000203!2.71e-08!25;UBERON:0002791!1.84e-07!33;UBERON:0002780!7.07e-07!41;UBERON:0001890!7.07e-07!41;UBERON:0006240!7.07e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.00e-22;3!UBERON:0000946;1.00e-22;3!UBERON:0002084;5.26e-18;1!UBERON:0002082;5.26e-18;1!UBERON:0002135;1.12e-17;1!UBERON:0002146;1.12e-17;1!UBERON:0005623;1.12e-17;1!UBERON:0002133;1.64e-09;2!UBERON:0010313;1.73e-07;10!UBERON:0000948;2.41e-07;22!UBERON:0004151;7.28e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,8.04e-23,3;UBERON:0009751,8.04e-23,3;UBERON:0000946,8.04e-23,3;UBERON:0002523,8.04e-23,3;UBERON:0005983,8.04e-23,3;UBERON:0002165,8.04e-23,3;UBERON:0002062,8.04e-23,3;UBERON:0007280,8.04e-23,3;UBERON:0002084,4.44e-18,1;UBERON:0002082,4.44e-18,1;UBERON:0010226,4.44e-18,1;UBERON:0002135,8.72e-18,1;UBERON:0002146,1.03e-17,1;UBERON:0005623,1.03e-17,1;UBERON:0004797,2.35e-10,7;UBERON:0002133,1.44e-09,2;UBERON:0010313,1.62e-07,10;UBERON:0002342,1.62e-07,10;UBERON:0005062,1.62e-07,10;UBERON:0004151,6.88e-07,3;UBERON:0000948,8.42e-07,24;UBERON:0005498,8.42e-07,24;UBERON:0004140,8.42e-07,24;UBERON:0009881,8.42e-07,24;UBERON:0004141,8.42e-07,24;UBERON:0003084,8.42e-07,24;UBERON:0007005,8.42e-07,24;UBERON:0004139,8.42e-07,24;UBERON:0004291,8.42e-07,24 | |||
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| ||
|short_description=p@chr1:237957220..237957263,+ | |short_description=p@chr1:237957220..237957263,+ | ||
}} | }} |
Latest revision as of 05:34, 28 July 2015
Short description: | p@chr1:237957220..237957263, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:237957220..237957263, + |
Coexpression cluster: | C307_acute_chronic_leukemia_CD133_Mast_CD34_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 8.04e-23 | 3 |
cardiac mesenchyme | 8.04e-23 | 3 |
cardial valve | 8.04e-23 | 3 |
tunica intima | 8.04e-23 | 3 |
heart layer | 8.04e-23 | 3 |
endocardium | 8.04e-23 | 3 |
endocardial cushion | 8.04e-23 | 3 |
presumptive endocardium | 8.04e-23 | 3 |
heart left ventricle | 4.44e-18 | 1 |
cardiac ventricle | 4.44e-18 | 1 |
future cardiac ventricle | 4.44e-18 | 1 |
mitral valve | 8.72e-18 | 1 |
pulmonary valve | 1.03e-17 | 1 |
semi-lunar valve | 1.03e-17 | 1 |
blood vessel layer | 2.35e-10 | 7 |
atrioventricular valve | 1.44e-09 | 2 |
neural crest-derived structure | 1.62e-07 | 10 |
neural crest | 1.62e-07 | 10 |
neural fold | 1.62e-07 | 10 |
cardiac chamber | 6.88e-07 | 3 |
heart | 8.42e-07 | 24 |
primitive heart tube | 8.42e-07 | 24 |
primary heart field | 8.42e-07 | 24 |
anterior lateral plate mesoderm | 8.42e-07 | 24 |
heart tube | 8.42e-07 | 24 |
heart primordium | 8.42e-07 | 24 |
cardiac mesoderm | 8.42e-07 | 24 |
cardiogenic plate | 8.42e-07 | 24 |
heart rudiment | 8.42e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.66e-18 | 1 |
myeloid leukemia | 1.36e-13 | 31 |
leukemia | 8.15e-11 | 39 |
chronic leukemia | 2.16e-09 | 8 |
hematologic cancer | 2.85e-08 | 51 |
immune system cancer | 2.85e-08 | 51 |