FFCP PHASE1:Hg19::chr16:15991751..15991767,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:15991751..15991767,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr16:15991751..15991767,- | |description=CAGE_peak_at_chr16:15991751..15991767,- | ||
|id=chr16:15991751..15991767,- | |id=chr16:15991751..15991767,- | ||
|ontology_enrichment_celltype=CL:0000945!2.51e-12!24;CL:0000826!2.51e-12!24;CL:0002622!1.86e-07!3;CL:0000542!8.61e-07!53;CL:0000051!8.61e-07!53 | |ontology_enrichment_celltype=CL:0000945!2.51e-12!24;CL:0000826!2.51e-12!24;CL:0002622!1.86e-07!3;CL:0000542!8.61e-07!53;CL:0000051!8.61e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.88e-21;1!CL:0000159;2.02e-11;2!CL:0000322;4.52e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.88e-21,1;CL:0000159,2.02e-11,2;CL:0000322,4.52e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.88e-21;1!DOID:6193;5.16e-21;1!DOID:2355;5.16e-21;1!DOID:3910;1.82e-11;2!DOID:74;3.34e-11;2!DOID:3350;3.34e-11;2!DOID:3307;3.34e-11;2!DOID:0060058;6.28e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.88e-21,1;DOID:2355,4.22e-21,1;DOID:6193,5.16e-21,1;DOID:3910,1.82e-11,2;DOID:3307,2.47e-11,2;DOID:74,3.02e-11,2;DOID:3350,3.35e-11,2;DOID:0060058,6.04e-09,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.82e-11;2!UBERON:0002173;1.82e-11;2!UBERON:0002186;1.82e-11;2!UBERON:0004821;4.52e-08;3!UBERON:0007499;4.52e-08;3!UBERON:0003215;4.52e-08;3!UBERON:0010368;4.52e-08;3!UBERON:0009911;4.52e-08;3!UBERON:0002299;4.52e-08;3!UBERON:0006524;4.52e-08;3!UBERON:0008874;4.52e-08;3!UBERON:0002169;4.52e-08;3!UBERON:0004894;4.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.82e-11,2;UBERON:0002173,1.82e-11,2;UBERON:0002186,1.82e-11,2;UBERON:0004821,4.52e-08,3;UBERON:0003215,4.52e-08,3;UBERON:0010368,4.52e-08,3;UBERON:0009911,4.52e-08,3;UBERON:0002299,4.52e-08,3;UBERON:0006524,4.52e-08,3;UBERON:0008874,4.52e-08,3;UBERON:0002169,4.52e-08,3;UBERON:0004894,4.52e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.458480434487708,0.903106483949403,0.708397031823113,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,1.11838053946208,0.500547425135725,0,0,0,0,0,0,0,0,0,2.00598091699461,13.3543988999014,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.293977192243133,0.174118413160805,0,1.54787429224455,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6087933092499,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.50313580350515,0.889811221596536,0.228840068396924,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0.163565394255844,0.327609848846413,9.09359762388761,0,0,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0.0802413666891683,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,1.9307228228694,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.458480434487708,0.903106483949403,0.708397031823113,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,1.11838053946208,0.500547425135725,0,0,0,0,0,0,0,0,0,2.00598091699461,13.3543988999014,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.293977192243133,0.174118413160805,0,1.54787429224455,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6087933092499,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.50313580350515,0.889811221596536,0.228840068396924,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0.163565394255844,0.327609848846413,9.09359762388761,0,0,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0.0802413666891683,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,1.9307228228694,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr16:15991751..15991767,- | |short_description=p@chr16:15991751..15991767,- | ||
}} | }} |
Latest revision as of 06:40, 25 July 2015
Short description: | p@chr16:15991751..15991767, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15991751..15991767, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.88e-21 | 1 |
seromucus secreting cell | 2.02e-11 | 2 |
pneumocyte | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.82e-11 | 2 |
alveolar duct | 1.82e-11 | 2 |
bronchiole | 1.82e-11 | 2 |
pulmonary alveolus epithelium | 4.52e-08 | 3 |
alveolus | 4.52e-08 | 3 |
pulmonary lobule | 4.52e-08 | 3 |
lobule | 4.52e-08 | 3 |
alveolus of lung | 4.52e-08 | 3 |
alveolar system | 4.52e-08 | 3 |
pulmonary acinus | 4.52e-08 | 3 |
alveolar sac | 4.52e-08 | 3 |
alveolar wall | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.88e-21 | 1 |
anemia | 4.22e-21 | 1 |
epithelioid sarcoma | 5.16e-21 | 1 |
lung adenocarcinoma | 1.82e-11 | 2 |
teratoma | 2.47e-11 | 2 |
hematopoietic system disease | 3.02e-11 | 2 |
mesenchymal cell neoplasm | 3.35e-11 | 2 |
lymphoma | 6.04e-09 | 10 |