FFCP PHASE1:Hg19::chr16:57896785..57896797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3801 | |EntrezGene=3801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6326 | |HGNC=6326 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_uc002emr.1_5end | |association_with_transcript=-52bp_to_uc002emr.1_5end | ||
|cluster_id=chr16:57896785..57896797,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_24_at_KIFC3_5end | |description=CAGE_peak_24_at_KIFC3_5end | ||
|id=chr16:57896785..57896797,- | |id=chr16:57896785..57896797,- | ||
|ontology_enrichment_celltype=CL:0000181!1.93e-28!12;CL:0000417!1.93e-28!12;CL:0000668!1.93e-28!12;CL:0000414!1.93e-28!12;CL:0000412!1.93e-28!12;CL:0000182!1.93e-28!12;CL:0000223!3.91e-09!59 | |ontology_enrichment_celltype=CL:0000181!1.93e-28!12;CL:0000417!1.93e-28!12;CL:0000668!1.93e-28!12;CL:0000414!1.93e-28!12;CL:0000412!1.93e-28!12;CL:0000182!1.93e-28!12;CL:0000223!3.91e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:7!1.41e-07!39 | |ontology_enrichment_disease=DOID:7!1.41e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!2.08e-23!22;UBERON:0003894!2.08e-23!22;UBERON:0009854!2.60e-22!23;UBERON:0002107!2.77e-22!19;UBERON:0006925!2.77e-22!19;UBERON:0008836!2.77e-22!19;UBERON:0007499!2.23e-20!25;UBERON:0009497!2.23e-20!25;UBERON:0000015!2.23e-20!25;UBERON:0002423!2.23e-20!25;UBERON:0006235!2.23e-20!25;UBERON:0004161!2.23e-20!25;UBERON:0009856!1.59e-19!26;UBERON:0003929!7.51e-17!54;UBERON:0005057!7.20e-16!26;UBERON:0004921!5.65e-14!129;UBERON:0004185!5.65e-14!129;UBERON:0002365!4.64e-13!31;UBERON:0002330!4.64e-13!31;UBERON:0005172!4.74e-12!55;UBERON:0005173!4.74e-12!55;UBERON:0005911!9.89e-12!82;UBERON:0002368!2.16e-11!35;UBERON:0001007!6.83e-11!155;UBERON:0001555!6.83e-11!155;UBERON:0007026!6.83e-11!155;UBERON:0002417!1.24e-10!61;UBERON:0000916!1.24e-10!61;UBERON:0004119!1.26e-09!169;UBERON:0000925!1.26e-09!169;UBERON:0006595!1.26e-09!169;UBERON:0002530!3.12e-09!59;UBERON:0000949!1.60e-08!45;UBERON:0000077!2.69e-07!130;UBERON:0001282!6.24e-07!1;UBERON:0009842!6.24e-07!1;UBERON:0003704!6.24e-07!1;UBERON:0001171!6.24e-07!1;UBERON:0001172!6.24e-07!1;UBERON:0001041!8.45e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002108;4.63e-27;4!UBERON:0002423;9.78e-22;25!UBERON:0002365;3.13e-18;31!UBERON:0002330;3.13e-18;31!UBERON:0002368;1.07e-14;33!UBERON:0000949;2.46e-12;43!UBERON:0002114;3.24e-12;2!UBERON:0001007;1.95e-10;81!UBERON:0005172;4.23e-09;52!UBERON:0005173;4.23e-09;52!UBERON:0000160;2.80e-08;17!UBERON:0002530;7.05e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0002108,4.63e-27,4;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0002114,3.24e-12,2;UBERON:0004921,2.09e-10,118;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0000160,2.80e-08,17;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p24@KIFC3 | |short_description=p24@KIFC3 | ||
}} | }} |
Latest revision as of 04:58, 17 September 2015
Short description: | p24@KIFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_KIFC3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -52bp_to_uc002emr.1_5end |
EntrezGene: | KIFC3 |
HGNC: | 6326 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
small intestine | 4.63e-27 | 4 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
duodenum | 3.24e-12 | 2 |
subdivision of digestive tract | 2.09e-10 | 118 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
digestive system | 1.51e-08 | 145 |
digestive tract | 1.51e-08 | 145 |
primitive gut | 1.51e-08 | 145 |
intestine | 2.80e-08 | 17 |
endoderm-derived structure | 8.84e-08 | 160 |
endoderm | 8.84e-08 | 160 |
presumptive endoderm | 8.84e-08 | 160 |
endo-epithelium | 5.11e-07 | 82 |