FFCP PHASE1:Hg19::chr11:69467416..69467438,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:69467416..69467438,+
|short_description=p7@CCND1
|description=CAGE_peak_7_at_CCND1_5end
|association_with_transcript=51bp_to_AB075505_5end
|EntrezGene=59...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=595 | |EntrezGene=595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1582 | |HGNC=1582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_AB075505_5end | |||
|cluster_id=chr11:69467416..69467438,+ | |||
|coexpression_cluster_id=C807 | |||
|description=CAGE_peak_7_at_CCND1_5end | |||
|id=chr11:69467416..69467438,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.36e-12!180;CL:0000220!1.49e-12!246;CL:0002321!4.31e-12!248;CL:0000066!6.88e-11!254;CL:0000359!1.36e-08!32;CL:0000192!2.32e-07!42;CL:0000514!2.32e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.65e-09;32!CL:0002334;4.83e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.52e-09,32;CL:0000192,5.80e-07,43;CL:0000514,5.80e-07,43;CL:0002334,7.19e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.35e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.07e-07;3!DOID:127;2.07e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.29e-07,3;DOID:127,1.29e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002100!7.11e-09!216;UBERON:0000486!1.03e-07!82;UBERON:0005256!2.39e-07!143;UBERON:0001637!3.10e-07!42;UBERON:0003509!3.10e-07!42;UBERON:0004572!3.10e-07!42;UBERON:0004923!4.76e-07!57;UBERON:0003102!7.06e-07!95;UBERON:0002049!8.15e-07!79;UBERON:0007798!8.15e-07!79;UBERON:0000475!8.92e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.36e-08;33!UBERON:0004571;1.36e-08;33!UBERON:0000310;9.14e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.99e-09,33;UBERON:0004571,3.99e-09,33;UBERON:0001637,9.57e-09,42;UBERON:0003509,9.57e-09,42;UBERON:0004572,9.57e-09,42;UBERON:0007500,1.20e-07,59;UBERON:0001981,1.20e-07,59;UBERON:0004537,1.20e-07,59;UBERON:0006965,1.20e-07,59;UBERON:0002329,4.49e-07,71;UBERON:0003059,4.49e-07,71;UBERON:0007282,4.49e-07,71;UBERON:0004290,4.49e-07,71;UBERON:0009618,4.49e-07,71;UBERON:0003077,6.60e-07,72;UBERON:0007285,6.60e-07,72;UBERON:0000310,7.64e-07,10;UBERON:0000055,7.75e-07,68;UBERON:0007524,9.58e-07,73;UBERON:0000486,9.61e-07,83 | |||
|phase1_expression=1.2717486548939,2.35510576280081,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,1.47440361900905,0,0.436882744260345,0.263766978228454,0.37129905888014,0,2.01697543935533,1.20538905604795,2.19093027116212,2.43966399395253,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0,0.724232594804119,0.795285947051099,0,0.472674085820339,0.443458794925128,0.614843499851882,0,0.364295288292542,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.775250277507987,0.35576626268671,0,0,1.52054421143703,0.732186172644509,0,0,0.17859945656816,0,0,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,1.49091585508596,1.8994576749687,2.38336525463794,0.286836620748814,2.12801029319014,0.560677600142307,0,0.49333509683432,0.311211035399766,0,0,0.151357427644931,0,0,0.624320153660641,0.570471821544449,1.49448680551801,0.117434498643765,0,0,0.816616685019573,0.737005903870608,0.103325781175765,1.18800285728205,0.989067717114227,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,1.22595118319608,0.600952235626387,0.453728732640084,0.89694817844431,1.06778694409284,1.05965950579781,0,0,0,0.18611685633159,2.70042131586026,0.0974370051611986,0,0.460249493211497,0,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0.116193942869518,0.621966330092223,0.504641701751257,1.09493207722749,0,1.92972281457866,1.38134921352481,2.3218396401599,0.721879481669586,0.118306800039844,0.337169380156203,0.723033089650446,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.658501712451753,0,0.100528972411631,0.185176890317059,0.325808305310325,0,1.44331342025273,0.579652024875384,0,0.433099343283221,1.38895653772983,0.951270761172991,3.1608175918371,0.858486162094873,0,0,0.148631162288728,0,1.17587489739202,0.283550194484773,0.53735113621709,0.581267877027924,0.383382679165211,0.492663237895943,0,0,0,0,0.571481048629521,1.52795370223311,1.17217447210047,0,1.33675740514321,0.901029173531752,1.42913216315289,0,0,0.5867062865676,1.55126058909333,0,0.845302752556,1.86156681609409,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0,0.65147236858747,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.958499421966331,0,0,3.4747513600219,1.02738161275192,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.473107245101804,0.468565659970853,0.601892199455438,2.27407504055985,0,0.664225598535437,0.553107505625109,1.65078867489357,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,1.48864684691266,1.2276957863045,1.68396056659844,1.02511319404561,1.02341449813341,2.2519548960105,0,0.462629081407967,0.355123450626254,1.39616165223476,0.519254429183621,0.232420756919918,1.0877350463246,0.802025881213139,0.644566922551274,1.49258782613989,1.27463817604702,0.655622074797121,0.451199612907412,1.92538342761037,0,1.46139224653261,0.844413031143006,0,0,0.215915916102139,0,0.812839312631559,0,1.01950509218015,0,0.671624264166535,0,0,2.05160100093111,1.96808787419823,0,0.103041011647722,0,0,0,0.650060246036521,0,0.48335359146061,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.826424576804891,0,0.765676274967505,0.30347334256665,0.929691098594572,0,2.0911118104818,0.308033580176089,0,0.869932992075073,1.8532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0.511795582622668,0.855877976067841,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,3.17020642346017,0.421258456238981,0.48763373908959,1.46228093778771,1.05650146756755,0.136499911407986,1.27264888758341,2.26016233240486,0.551365343546124,3.98063385144732,1.31535265576129,0,0,0.811641507850816,0.92947049429925,0.563391205064483,1.00387946542836,0.589494246078727,1.426684205925,0,1.05553817648832,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,2.41544127663434,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0.71623345421307,0,0.307160702099232,0,0.140669416410513,0.556543525114529,0,1.47787785689595,0.19924798825107,0,0,1.22722419002586,0.123084805461069,2.48831670129446,0.449341755736634,0.716084698702437,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0.455173793141999,0.762760950878299,0,0,2.33283690706603,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.557694977114413,0.0769502585037971,0,0,0.179515288819544,0,0.31900115973192,0.915975934018623,0,0,0,0,0,0,0,0,0,0.84399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| ||
|short_description=p7@CCND1 | |||
}} | }} |
Latest revision as of 21:35, 19 September 2015
Short description: | p7@CCND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCND1_5end |
Coexpression cluster: | C807_neuroectodermal_renal_leiomyoma_Smooth_neuroblastoma_Aortic_Melanocyte |
Association with transcript: | 51bp_to_AB075505_5end |
EntrezGene: | CCND1 |
HGNC: | 1582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.52e-09 | 32 |
smooth muscle cell | 5.80e-07 | 43 |
smooth muscle myoblast | 5.80e-07 | 43 |
preadipocyte | 7.19e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 3.99e-09 | 33 |
systemic arterial system | 3.99e-09 | 33 |
artery | 9.57e-09 | 42 |
arterial blood vessel | 9.57e-09 | 42 |
arterial system | 9.57e-09 | 42 |
epithelial tube open at both ends | 1.20e-07 | 59 |
blood vessel | 1.20e-07 | 59 |
blood vasculature | 1.20e-07 | 59 |
vascular cord | 1.20e-07 | 59 |
somite | 4.49e-07 | 71 |
presomitic mesoderm | 4.49e-07 | 71 |
presumptive segmental plate | 4.49e-07 | 71 |
dermomyotome | 4.49e-07 | 71 |
trunk paraxial mesoderm | 4.49e-07 | 71 |
paraxial mesoderm | 6.60e-07 | 72 |
presumptive paraxial mesoderm | 6.60e-07 | 72 |
breast | 7.64e-07 | 10 |
vessel | 7.75e-07 | 68 |
dense mesenchyme tissue | 9.58e-07 | 73 |
multilaminar epithelium | 9.61e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.29e-07 | 3 |
leiomyoma | 1.29e-07 | 3 |