FFCP PHASE1:Hg19::chr17:26697276..26697303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645832,7448 | |EntrezGene=645832,7448 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32942,12724 | |HGNC=32942,12724 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDG5,D9ZGG2,P04004 | |UniProt=C9JDG5,D9ZGG2,P04004 | ||
|association_with_transcript=69bp_to_ENST00000536498,NM_000638,uc002hbc.2_5end | |association_with_transcript=69bp_to_ENST00000536498,NM_000638,uc002hbc.2_5end | ||
|cluster_id=chr17:26697276..26697303,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_SEBOX_5end,CAGE_peak_2_at_VTN_5end | |description=CAGE_peak_2_at_SEBOX_5end,CAGE_peak_2_at_VTN_5end | ||
|id=chr17:26697276..26697303,- | |id=chr17:26697276..26697303,- | ||
|ontology_enrichment_celltype=CL:0000077!1.28e-10!19;CL:0000181!5.05e-08!12;CL:0000417!5.05e-08!12;CL:0000668!5.05e-08!12;CL:0000414!5.05e-08!12;CL:0000412!5.05e-08!12;CL:0000182!5.05e-08!12 | |ontology_enrichment_celltype=CL:0000077!1.28e-10!19;CL:0000181!5.05e-08!12;CL:0000417!5.05e-08!12;CL:0000668!5.05e-08!12;CL:0000414!5.05e-08!12;CL:0000412!5.05e-08!12;CL:0000182!5.05e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.03e-16;19!CL:0000182;2.52e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.10e-16,19;CL:0000182,2.56e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.69e-14;31!UBERON:0004161;2.42e-10;11!UBERON:0009497;2.47e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.94e-12!19;UBERON:0006925!1.94e-12!19;UBERON:0008836!1.94e-12!19;UBERON:0009497!3.70e-12!25;UBERON:0000015!3.70e-12!25;UBERON:0002423!3.70e-12!25;UBERON:0006235!3.70e-12!25;UBERON:0004161!3.70e-12!25;UBERON:0007100!4.10e-12!27;UBERON:0009854!1.14e-11!23;UBERON:0003929!1.28e-11!54;UBERON:0008835!2.17e-11!22;UBERON:0003894!2.17e-11!22;UBERON:0000948!5.26e-10!24;UBERON:0005498!5.26e-10!24;UBERON:0004140!5.26e-10!24;UBERON:0009881!5.26e-10!24;UBERON:0004141!5.26e-10!24;UBERON:0003084!5.26e-10!24;UBERON:0007005!5.26e-10!24;UBERON:0004139!5.26e-10!24;UBERON:0004291!5.26e-10!24;UBERON:0005057!1.32e-09!26;UBERON:0001048!1.39e-09!168;UBERON:0003914!1.56e-09!118;UBERON:0002368!1.94e-09!35;UBERON:0009856!2.47e-09!26;UBERON:0007499!4.86e-09!25;UBERON:0002417!2.22e-08!61;UBERON:0000916!2.22e-08!61;UBERON:0004921!7.45e-08!129;UBERON:0004185!7.45e-08!129;UBERON:0000477!1.83e-07!286;UBERON:0003104!2.62e-07!238;UBERON:0009142!2.62e-07!238;UBERON:0002530!2.66e-07!59;UBERON:0004872!3.37e-07!84;UBERON:0005172!4.71e-07!55;UBERON:0005173!4.71e-07!55;UBERON:0005911!5.00e-07!82;UBERON:0000481!6.19e-07!347 | |ontology_enrichment_uberon=UBERON:0002107!1.94e-12!19;UBERON:0006925!1.94e-12!19;UBERON:0008836!1.94e-12!19;UBERON:0009497!3.70e-12!25;UBERON:0000015!3.70e-12!25;UBERON:0002423!3.70e-12!25;UBERON:0006235!3.70e-12!25;UBERON:0004161!3.70e-12!25;UBERON:0007100!4.10e-12!27;UBERON:0009854!1.14e-11!23;UBERON:0003929!1.28e-11!54;UBERON:0008835!2.17e-11!22;UBERON:0003894!2.17e-11!22;UBERON:0000948!5.26e-10!24;UBERON:0005498!5.26e-10!24;UBERON:0004140!5.26e-10!24;UBERON:0009881!5.26e-10!24;UBERON:0004141!5.26e-10!24;UBERON:0003084!5.26e-10!24;UBERON:0007005!5.26e-10!24;UBERON:0004139!5.26e-10!24;UBERON:0004291!5.26e-10!24;UBERON:0005057!1.32e-09!26;UBERON:0001048!1.39e-09!168;UBERON:0003914!1.56e-09!118;UBERON:0002368!1.94e-09!35;UBERON:0009856!2.47e-09!26;UBERON:0007499!4.86e-09!25;UBERON:0002417!2.22e-08!61;UBERON:0000916!2.22e-08!61;UBERON:0004921!7.45e-08!129;UBERON:0004185!7.45e-08!129;UBERON:0000477!1.83e-07!286;UBERON:0003104!2.62e-07!238;UBERON:0009142!2.62e-07!238;UBERON:0002530!2.66e-07!59;UBERON:0004872!3.37e-07!84;UBERON:0005172!4.71e-07!55;UBERON:0005173!4.71e-07!55;UBERON:0005911!5.00e-07!82;UBERON:0000481!6.19e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.57e-14;19!UBERON:0006925;1.57e-14;19!UBERON:0002423;1.82e-11;25!UBERON:0007100;6.44e-10;25!UBERON:0001737;2.13e-09;9!UBERON:0001557;2.13e-09;9!UBERON:0002368;1.14e-08;33!UBERON:0000948;3.13e-07;22!UBERON:0002365;7.48e-07;31!UBERON:0002330;7.48e-07;31!UBERON:0005172;9.31e-07;52!UBERON:0005173;9.31e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.56e-14,19;UBERON:0006925,1.56e-14,19;UBERON:0008836,1.56e-14,19;UBERON:0008835,7.59e-12,22;UBERON:0003894,7.59e-12,22;UBERON:0009497,1.81e-11,25;UBERON:0000015,1.81e-11,25;UBERON:0002423,1.81e-11,25;UBERON:0006235,1.81e-11,25;UBERON:0004161,1.81e-11,25;UBERON:0009854,4.11e-11,23;UBERON:0005172,1.78e-10,54;UBERON:0005173,1.78e-10,54;UBERON:0002417,3.92e-10,60;UBERON:0000916,3.92e-10,60;UBERON:0007100,4.49e-10,27;UBERON:0007499,7.87e-10,25;UBERON:0003929,1.81e-09,54;UBERON:0001737,1.92e-09,9;UBERON:0009856,2.88e-09,26;UBERON:0002368,1.70e-08,35;UBERON:0003104,1.86e-08,160;UBERON:0009142,1.86e-08,160;UBERON:0003914,2.92e-08,117;UBERON:0001048,3.49e-08,160;UBERON:0004921,6.82e-08,118;UBERON:0000948,1.97e-07,24;UBERON:0005498,1.97e-07,24;UBERON:0004140,1.97e-07,24;UBERON:0009881,1.97e-07,24;UBERON:0004141,1.97e-07,24;UBERON:0003084,1.97e-07,24;UBERON:0007005,1.97e-07,24;UBERON:0004139,1.97e-07,24;UBERON:0004291,1.97e-07,24;UBERON:0005911,3.01e-07,82;UBERON:0004797,3.14e-07,7;UBERON:0002365,4.94e-07,31;UBERON:0002330,4.94e-07,31 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,1.0007329835313,0.893922188854576,2.61701557230111,0,0,1.30592814099919,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11957737119962,0.32389366601898,1.54545340580512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,5.36560687762909,5.75381528295886,1.0843174571537,0.50133791063589,2.60723734129483,0,0.973269740605272,0.189069634328136,0.443458794925128,0.351339142772504,3.07800827419625,0,0,8.76277962867645,6.96518949197069,12.3650903282545,0,0,0,0.198762407366705,0,0,0,1.25849830862972,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,1.2663051166458,1.98613771219828,6.3104056564739,2.83734705758686,5.60677600142307,2.1349799145941,1.48000529050296,1.8672662123986,0.269421344139376,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.989067717114227,2.73048408581408,5.03032699271367,0,0,0,0,0,1.35214253015937,0.907457465280168,0,0,0.423863802319124,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0.974370051611986,0.252433774244115,0,41.3813905456158,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,5.22872742912833,2.59152637538426,5.04641701751257,0,0,0,0,0,0,4.02243120135469,4.55178663210875,6.02527574708705,3.86028904563379,5.01122721412534,4.27087114399974,4.98875840192608,3.53198637225623,3.8474715694639,0.738155454624648,0,23.4597186458898,17.641045366265,1420.92394035272,894.37276717664,643.96099828273,0,297.017079081619,0.343135620597051,0,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,7.88557466122444,0,0,1.86156681609409,0,0,0,0,2.85955987316295,115.578401948377,5.76268235746538,0,3.19852753868291,0.791951872933429,40.3928765259845,14.816068796205,49.4866306351182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,3.95144636908534,1.42743191037729,0.788512075169673,1.40569697991256,0,0,0,0,0.553107505625109,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,1.73675465473144,0.306923946576125,0.561320188866147,0.128139149255701,3.07024349440022,0.64341568457443,0,0,0.710246901252508,0.164254312027618,0,0.232420756919918,104.543423896753,0,0,16.3036516393742,1.0925470080403,4.45823010862042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26419039409617,0.650756789328606,418.655630324696,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,2.51849877464512,0,1.54016790088044,0.532306030317022,0,0.37064843820784,0.572499546967965,0.372158369359667,0.949138274156178,8.38772853264829,1.27948895655667,0,0.636406495851874,0,0,0.54907405947211,0,0.404364963146632,0,0.421258456238981,0.975267478179181,3.1682753652067,0,0.9554993798559,9.04994764503762,3.39024349860728,0,0,0,0,0,1.21746226177622,0.6196469961995,0.563391205064483,2.00775893085672,29.8677084679888,1.07001315444375,0,11.6109199413715,10.8667314676768,0.379473173765715,0,0,0.670302275535787,0,395.403963262472,0,0,0,0,0,0,0,0,0,0,0,0,10.1482867571099,27.9119158026374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0.445234820091624,0,2.53350489753592,0.597743964753209,0.828851746593443,33.2551227167644,0,0,0.311039587661807,0.0898683511473268,0.358042349351218,0,3.15658898038188,0,0,14.5399911914283,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,5.12010778539254,0,0.307801034015188,45.6907643946475,0,0,0.217294743844016,3.82801391678303,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0.189753732724185,0,0,0,127.217764290547,0,0,0.884575645033392,0,0,0,0.104421949505455,0.337005664903385,0,0,0,0,0,5.12959723704208,6.04953580243319,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,20.7058548958642,20.0264728816148,16.3409759535886,0.0969890164884194,0.176512253383001,0.90392296312213,0,0,0,0.195551382734803,0.160317640503067,49.9480007690085,0.599428828746391,0,0,3.94668495082519,0,0,2.82832841540154,3.39760515184035,2.92887969674533,0.509991088181609,2.88950589901519,0,0,0,8.16554338697919,0,5.58564802544508,8.70809611244398,2.87149209830726,21.76501105439,43.3518308617937,11.8280872444192,0.873385142327441,0.720599767084807,22.1342304102162,61.8447981111706,60.0811607598703,64.3029808368924,78.6435577302843,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0.0607495566580247,0,1.10327990218877,1.57363764404994,0,12.5501137532991,0,28.5878130549347,15.8902072887704,7.119519054333,1.08599920350743,3.45688596480507,0,0,0.082092520749339,0.170388021785422,1.24643300672138,1217.84906186487,537.977968983619,0,0.13223260174269,11.2917313003657,0,1.06787412567695,0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| ||
|short_description=p2@SEBOX,p2@VTN | |short_description=p2@SEBOX,p2@VTN | ||
}} | }} |
Latest revision as of 05:39, 19 September 2015
Short description: | p2@SEBOX, p2@VTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEBOX_5end, CAGE_peak_2_at_VTN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 69bp_to_ENST00000536498, NM_000638, uc002hbc.2_5end |
EntrezGene: | 645832,7448 |
HGNC: | 12724&submit=Submit 32942, 12724 |
UniProt: | C9JDG5D9ZGG2P04004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.10e-16 | 19 |
hepatocyte | 2.56e-09 | 12 |