FFCP PHASE1:Hg19::chr11:78075139..78075168,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:78075139..78075168,-
|short_description=p@chr11:78075139..78075168,-
|description=CAGE_peak_at_chr11:78075139..78075168,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:78075139..78075168,- | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr11:78075139..78075168,- | |||
|id=chr11:78075139..78075168,- | |||
|ontology_enrichment_celltype=CL:0002057!1.75e-54!42;CL:0000860!4.66e-50!45;CL:0000766!6.00e-44!76;CL:0000557!2.79e-38!71;CL:0000839!5.96e-37!70;CL:0002009!1.75e-34!65;CL:0002194!7.10e-34!63;CL:0000576!7.10e-34!63;CL:0000040!7.10e-34!63;CL:0000559!7.10e-34!63;CL:0000738!1.84e-33!140;CL:0000763!4.62e-31!112;CL:0000049!4.62e-31!112;CL:0000037!1.66e-27!172;CL:0000566!1.66e-27!172;CL:0002031!2.54e-27!124;CL:0002032!8.27e-26!165;CL:0000837!8.27e-26!165;CL:0000988!4.77e-25!182;CL:0002087!6.01e-25!119;CL:0000039!1.78e-11!7;CL:0000586!1.78e-11!7;CL:0000775!9.87e-08!3;CL:0000134!3.03e-07!358;CL:0002320!8.04e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.05e-29;7!CL:0000586;3.05e-29;7!CL:0000860;2.86e-27;33!CL:0002057;2.86e-27;33!CL:0000775;3.03e-25;3!CL:0000473;8.29e-24;39!CL:0000234;8.29e-24;39!CL:0000576;3.94e-17;48!CL:0000766;1.02e-15;69!CL:0000094;8.08e-10;8!CL:0000081;2.89e-07;11!CL:0000763;7.14e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.86e-29,42;CL:0002057,2.86e-29,42;CL:0000039,4.33e-29,7;CL:0000586,4.33e-29,7;CL:0000473,2.46e-25,48;CL:0000234,2.46e-25,48;CL:0000775,3.29e-25,3;CL:0000766,7.39e-25,72;CL:0002194,8.02e-20,59;CL:0000576,8.02e-20,59;CL:0000040,8.02e-20,59;CL:0000559,8.02e-20,59;CL:0002009,4.13e-19,61;CL:0000839,1.62e-17,66;CL:0000557,3.17e-17,67;CL:0000763,1.04e-15,108;CL:0000049,1.04e-15,108;CL:0000738,6.57e-12,136;CL:0000094,8.33e-10,8;CL:0002032,1.26e-09,161;CL:0000837,1.26e-09,161;CL:0002087,3.67e-09,115;CL:0000037,4.16e-09,168;CL:0002031,1.09e-08,120;CL:0000988,1.68e-08,177;CL:0000081,2.95e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.32e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.11e-09;1!DOID:10165;1.11e-09;1!DOID:1798;1.11e-09;1!DOID:3095;3.29e-09;22!DOID:2994;3.29e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.12e-09,1;DOID:10165,1.12e-09,1;DOID:1798,1.12e-09,1;DOID:3095,3.66e-09,22;DOID:2994,3.66e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.44e-32!80;UBERON:0001474!1.99e-29!86;UBERON:0002390!2.26e-28!102;UBERON:0003061!2.26e-28!102;UBERON:0002193!1.20e-24!112;UBERON:0004765!3.15e-23!101;UBERON:0001434!3.15e-23!101;UBERON:0002405!4.33e-21!115;UBERON:0002204!6.64e-11!167;UBERON:0003081!1.04e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.00e-15,76;UBERON:0001474,1.05e-13,82;UBERON:0004765,2.67e-12,90;UBERON:0002405,7.77e-12,93;UBERON:0002390,4.01e-11,98;UBERON:0003061,4.01e-11,98;UBERON:0001434,7.38e-11,100;UBERON:0002193,6.77e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,1.08505435357926,0,0.647787332037959,0,0.872389432677388,0.755751887377619,0.485168122375632,1.16214518452842,2.46700732813095,1.23882548358041,0.575384784644301,0.256160706529101,0.47296445977717,1.37898272294647,1.93645405075148,0,1.88242339542605,0.545812300115692,0.224723484445085,0.918251677112708,0.962787081228281,0.639337125799041,2.30895910130701,0.199463657621632,0.852449501065388,2.61188314765726,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,0.65156653411535,1.81619850790011,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,4.49404214368309,11.966458368161,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,13.474717973687,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,20.2896235861493,4.39812457607883,41.8292381899731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64550705337374,0.260994291965212,0,0,0,0,1.85280868296583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38101422340552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,1.01988829741982,0.801652215796681,5.329904173021,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.802177789880567,1.08505435357926,0,0.647787332037959,0,0.872389432677388,0.755751887377619,0.485168122375632,1.16214518452842,2.46700732813095,1.23882548358041,0.575384784644301,0.256160706529101,0.47296445977717,1.37898272294647,1.93645405075148,0,1.88242339542605,0.545812300115692,0.224723484445085,0.918251677112708,0.962787081228281,0.639337125799041,2.30895910130701,0.199463657621632,0.852449501065388,2.61188314765726,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,0.65156653411535,1.81619850790011,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,4.49404214368309,11.966458368161,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,13.474717973687,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,20.2896235861493,4.39812457607883,41.8292381899731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64550705337374,0.260994291965212,0,0,0,0,1.85280868296583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38101422340552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,1.01988829741982,0.801652215796681,5.329904173021,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:78075139..78075168,- | |||
}} | }} |
Latest revision as of 02:50, 24 July 2015
Short description: | p@chr11:78075139..78075168, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:78075139..78075168, - |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.86e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.86e-29 | 42 |
germ line cell | 4.33e-29 | 7 |
germ cell | 4.33e-29 | 7 |
defensive cell | 2.46e-25 | 48 |
phagocyte | 2.46e-25 | 48 |
neutrophil | 3.29e-25 | 3 |
myeloid leukocyte | 7.39e-25 | 72 |
monopoietic cell | 8.02e-20 | 59 |
monocyte | 8.02e-20 | 59 |
monoblast | 8.02e-20 | 59 |
promonocyte | 8.02e-20 | 59 |
macrophage dendritic cell progenitor | 4.13e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.62e-17 | 66 |
granulocyte monocyte progenitor cell | 3.17e-17 | 67 |
myeloid cell | 1.04e-15 | 108 |
common myeloid progenitor | 1.04e-15 | 108 |
leukocyte | 6.57e-12 | 136 |
granulocyte | 8.33e-10 | 8 |
hematopoietic oligopotent progenitor cell | 1.26e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-09 | 161 |
nongranular leukocyte | 3.67e-09 | 115 |
hematopoietic stem cell | 4.16e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 1.09e-08 | 120 |
hematopoietic cell | 1.68e-08 | 177 |
blood cell | 2.95e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.00e-15 | 76 |
bone element | 1.05e-13 | 82 |
skeletal element | 2.67e-12 | 90 |
immune system | 7.77e-12 | 93 |
hematopoietic system | 4.01e-11 | 98 |
blood island | 4.01e-11 | 98 |
skeletal system | 7.38e-11 | 100 |
hemolymphoid system | 6.77e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.12e-09 | 1 |
endocrine pancreas cancer | 1.12e-09 | 1 |
pancreatic endocrine carcinoma | 1.12e-09 | 1 |
germ cell and embryonal cancer | 3.66e-09 | 22 |
germ cell cancer | 3.66e-09 | 22 |