FFCP PHASE1:Hg19::chr2:133029373..133029386,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:133029373..133029386,- | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chr2:133029373..133029386,- | |description=CAGE_peak_at_chr2:133029373..133029386,- | ||
|id=chr2:133029373..133029386,- | |id=chr2:133029373..133029386,- | ||
|ontology_enrichment_celltype=CL:0000047!1.92e-07!8 | |ontology_enrichment_celltype=CL:0000047!1.92e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.42e-20;2!CL:0000214;1.23e-14;3!CL:0000228;3.63e-11;1!CL:0002372;3.63e-11;1!CL:0000153;1.10e-10;9!CL:0000447;1.10e-10;9!CL:0000540;7.31e-08;6!CL:0000404;7.31e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.31e-20,8;CL:0000214,1.23e-14,3;CL:0000228,3.28e-11,1;CL:0002372,3.28e-11,1;CL:0000153,1.25e-10,9;CL:0000447,1.25e-10,9;CL:0000540,7.32e-08,6;CL:0000031,7.32e-08,6;CL:0000404,7.32e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.78e-11;1!UBERON:0005062;2.97e-11;4!UBERON:0007284;2.97e-11;4!UBERON:0004874;3.63e-11;1!CL:0000031;7.31e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!3.33e-08!3;UBERON:0009751!3.33e-08!3;UBERON:0000946!3.33e-08!3;UBERON:0002523!3.33e-08!3;UBERON:0005983!3.33e-08!3;UBERON:0002165!3.33e-08!3;UBERON:0002062!3.33e-08!3;UBERON:0007280!3.33e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.07e-14;3!UBERON:0000946;1.07e-14;3!UBERON:0006915;1.23e-14;3!UBERON:0007616;1.23e-14;3!UBERON:0002217;1.23e-14;3!UBERON:0002018;1.23e-14;3!UBERON:0004905;5.93e-12;8!UBERON:0000982;5.93e-12;8!UBERON:0004770;5.93e-12;8!UBERON:0002146;1.06e-11;1!UBERON:0005623;1.06e-11;1!UBERON:0002134;1.31e-11;1!UBERON:0005208;1.31e-11;1!UBERON:0004145;1.31e-11;1!UBERON:0005946;1.31e-11;1!UBERON:0005965;1.31e-11;1!UBERON:0002078;1.31e-11;1!UBERON:0000989;3.63e-11;1!UBERON:0008811;3.63e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.08e-14,3;UBERON:0009751,1.08e-14,3;UBERON:0000946,1.08e-14,3;UBERON:0002523,1.08e-14,3;UBERON:0005983,1.08e-14,3;UBERON:0002165,1.08e-14,3;UBERON:0002062,1.08e-14,3;UBERON:0007280,1.08e-14,3;UBERON:0006915,1.23e-14,3;UBERON:0007616,1.23e-14,3;UBERON:0002217,1.23e-14,3;UBERON:0002018,1.23e-14,3;UBERON:0004905,7.15e-12,8;UBERON:0000982,7.15e-12,8;UBERON:0004770,7.15e-12,8;UBERON:0002146,1.06e-11,1;UBERON:0005623,1.06e-11,1;UBERON:0002134,1.31e-11,1;UBERON:0005208,1.31e-11,1;UBERON:0005946,1.31e-11,1;UBERON:0005965,1.31e-11,1;UBERON:0002078,1.31e-11,1;UBERON:0000989,2.18e-11,1;UBERON:0008811,2.18e-11,1;UBERON:0006258,2.18e-11,1;UBERON:0005876,2.18e-11,1;UBERON:0004874,2.18e-11,1;UBERON:0004797,8.61e-07,7 | |||
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| ||
|short_description=p@chr2:133029373..133029386,- | |short_description=p@chr2:133029373..133029386,- | ||
}} | }} |
Latest revision as of 00:24, 29 July 2015
Short description: | p@chr2:133029373..133029386, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133029373..133029386, - |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.31e-20 | 8 |
synovial cell | 1.23e-14 | 3 |
multinucleate cell | 3.28e-11 | 1 |
myotube | 3.28e-11 | 1 |
GAG secreting cell | 1.25e-10 | 9 |
carbohydrate secreting cell | 1.25e-10 | 9 |
neuron | 7.32e-08 | 6 |
neuroblast | 7.32e-08 | 6 |
electrically signaling cell | 7.32e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
valve | 1.08e-14 | 3 |
cardiac mesenchyme | 1.08e-14 | 3 |
cardial valve | 1.08e-14 | 3 |
tunica intima | 1.08e-14 | 3 |
heart layer | 1.08e-14 | 3 |
endocardium | 1.08e-14 | 3 |
endocardial cushion | 1.08e-14 | 3 |
presumptive endocardium | 1.08e-14 | 3 |
stratified squamous epithelium | 1.23e-14 | 3 |
layer of synovial tissue | 1.23e-14 | 3 |
synovial joint | 1.23e-14 | 3 |
synovial membrane of synovial joint | 1.23e-14 | 3 |
articulation | 7.15e-12 | 8 |
skeletal joint | 7.15e-12 | 8 |
articular system | 7.15e-12 | 8 |
pulmonary valve | 1.06e-11 | 1 |
semi-lunar valve | 1.06e-11 | 1 |
tricuspid valve | 1.31e-11 | 1 |
right atrium valve | 1.31e-11 | 1 |
outflow tract of atrium | 1.31e-11 | 1 |
outflow part of right atrium | 1.31e-11 | 1 |
right cardiac atrium | 1.31e-11 | 1 |
penis | 2.18e-11 | 1 |
intromittent organ | 2.18e-11 | 1 |
lateral plate mesenchyme | 2.18e-11 | 1 |
undifferentiated genital tubercle | 2.18e-11 | 1 |
somatopleure | 2.18e-11 | 1 |
blood vessel layer | 8.61e-07 | 7 |