FFCP PHASE1:Hg19::chr2:238395803..238395816,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79083 | |EntrezGene=79083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29643 | |HGNC=29643 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BV36 | |UniProt=Q9BV36 | ||
|association_with_transcript=0bp_to_ENST00000264605_5end | |association_with_transcript=0bp_to_ENST00000264605_5end | ||
|cluster_id=chr2:238395803..238395816,+ | |||
|description=CAGE_peak_4_at_MLPH_5end | |description=CAGE_peak_4_at_MLPH_5end | ||
|id=chr2:238395803..238395816,+ | |id=chr2:238395803..238395816,+ | ||
|ontology_enrichment_celltype=CL:0000669!1.03e-08!5;CL:1000507!1.15e-07!12;CL:1000494!1.15e-07!12;CL:0000066!1.68e-07!254;CL:0000710!8.01e-07!20;CL:0000075!9.97e-07!27 | |ontology_enrichment_celltype=CL:0000669!1.03e-08!5;CL:1000507!1.15e-07!12;CL:1000494!1.15e-07!12;CL:0000066!1.68e-07!254;CL:0000710!8.01e-07!20;CL:0000075!9.97e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.58e-25;3!CL:0000067;1.58e-25;3!CL:0005012;1.58e-25;3!CL:0002304;1.58e-25;3!CL:0000669;1.07e-19;4!CL:0000650;9.55e-18;2!CL:1000500;9.55e-18;2!CL:1000618;9.55e-18;2!CL:1001318;9.55e-18;2!CL:0002173;9.55e-18;2!CL:0000710;1.25e-14;20!CL:0000075;2.15e-14;27!CL:0002603;1.36e-12;3!CL:0002379;6.30e-10;1!CL:0002077;1.50e-08;34!CL:1000507;4.76e-08;10!CL:1000494;4.76e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.13e-25,3;CL:0000067,1.13e-25,3;CL:0005012,1.13e-25,3;CL:0002304,1.13e-25,3;CL:0000669,1.57e-19,4;CL:0000650,1.59e-17,2;CL:1000500,1.59e-17,2;CL:1000618,1.59e-17,2;CL:1001318,1.59e-17,2;CL:0002173,1.59e-17,2;CL:0000710,1.03e-14,20;CL:0000075,1.98e-14,27;CL:0002603,1.36e-12,3;CL:0002379,6.88e-10,1;CL:0002077,1.84e-08,34;CL:1000507,5.00e-08,10;CL:1000494,5.00e-08,10;CL:0000133,7.55e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.94e-07!4;DOID:1612!1.94e-07!4;DOID:3908!2.37e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3620;6.30e-10;1!DOID:3565;6.30e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,6.88e-10,1;DOID:3565,6.88e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002200!5.07e-11!11;UBERON:0006876!5.07e-11!11;UBERON:0000464!7.33e-09!104;UBERON:0000466!2.78e-08!126;UBERON:0000488!4.41e-08!4;UBERON:0002100!7.48e-08!216;UBERON:0000058!1.06e-07!26;UBERON:0009773!1.15e-07!12;UBERON:0001231!1.15e-07!12;UBERON:0004810!1.15e-07!12;UBERON:0002203!1.28e-07!6;UBERON:0001768!1.28e-07!6;UBERON:0000119!3.98e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.58e-25;3!UBERON:0001775;1.58e-25;3!UBERON:0000488;2.59e-19;4!UBERON:0003567;9.55e-18;2!UBERON:0003838;9.55e-18;2!UBERON:0003586;9.55e-18;2!UBERON:0005169;9.55e-18;2!UBERON:0002321;9.55e-18;2!UBERON:0005215;9.55e-18;2!UBERON:0002303;9.55e-18;2!UBERON:0002319;9.55e-18;2!UBERON:0002203;4.48e-13;6!UBERON:0001768;4.48e-13;6!UBERON:0002200;4.48e-13;6!UBERON:0007625;2.76e-12;11!UBERON:0004913;3.74e-10;1!UBERON:0003703;3.74e-10;1!UBERON:0001174;3.74e-10;1!UBERON:0004914;3.74e-10;1!UBERON:0001801;1.08e-09;14!UBERON:0003891;2.46e-09;4!UBERON:0004211;4.76e-08;10!UBERON:0009773;4.76e-08;10!UBERON:0001231;4.76e-08;10!UBERON:0004810;4.76e-08;10!UBERON:0001264;6.06e-08;10!UBERON:0006876;2.33e-07;11!UBERON:0000019;3.54e-07;19!UBERON:0000047;3.54e-07;19!UBERON:0004088;3.54e-07;19!UBERON:0010230;3.54e-07;19!UBERON:0000970;7.99e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.13e-25,3;UBERON:0001775,1.13e-25,3;UBERON:0000488,2.02e-19,4;UBERON:0003567,1.59e-17,2;UBERON:0003838,1.59e-17,2;UBERON:0003586,1.59e-17,2;UBERON:0005169,1.59e-17,2;UBERON:0002321,1.59e-17,2;UBERON:0005215,1.59e-17,2;UBERON:0002303,1.59e-17,2;UBERON:0002319,1.59e-17,2;UBERON:0002203,3.80e-13,6;UBERON:0001768,3.80e-13,6;UBERON:0002200,3.80e-13,6;UBERON:0007625,2.76e-12,11;UBERON:0000058,6.43e-11,19;UBERON:0004913,3.74e-10,1;UBERON:0003703,3.74e-10,1;UBERON:0001174,3.74e-10,1;UBERON:0004914,3.74e-10,1;UBERON:0001801,1.09e-09,14;UBERON:0003891,3.16e-09,4;UBERON:0004810,5.00e-08,10;UBERON:0001264,5.64e-08,10;UBERON:0006876,2.14e-07,11;UBERON:0000019,8.00e-07,20;UBERON:0000047,8.00e-07,20;UBERON:0010312,8.00e-07,20;UBERON:0004088,8.00e-07,20;UBERON:0010230,8.00e-07,20;UBERON:0003072,8.00e-07,20;UBERON:0004128,8.00e-07,20;UBERON:0003071,8.00e-07,20 | |||
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| ||
|short_description=p4@MLPH | |short_description=p4@MLPH | ||
}} | }} |
Latest revision as of 04:02, 16 September 2015
Short description: | p4@MLPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MLPH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264605_5end |
EntrezGene: | MLPH |
HGNC: | 29643 |
UniProt: | Q9BV36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.13e-25 | 3 |
ciliated epithelial cell | 1.13e-25 | 3 |
multi-ciliated epithelial cell | 1.13e-25 | 3 |
non-pigmented ciliary epithelial cell | 1.13e-25 | 3 |
pericyte cell | 1.57e-19 | 4 |
mesangial cell | 1.59e-17 | 2 |
kidney interstitial cell | 1.59e-17 | 2 |
juxtaglomerular complex cell | 1.59e-17 | 2 |
renal interstitial pericyte | 1.59e-17 | 2 |
extraglomerular mesangial cell | 1.59e-17 | 2 |
neurecto-epithelial cell | 1.03e-14 | 20 |
columnar/cuboidal epithelial cell | 1.98e-14 | 27 |
astrocyte of the cerebellum | 1.36e-12 | 3 |
meningothelial cell | 6.88e-10 | 1 |
ecto-epithelial cell | 1.84e-08 | 34 |
kidney tubule cell | 5.00e-08 | 10 |
nephron tubule epithelial cell | 5.00e-08 | 10 |
neurectodermal cell | 7.55e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.13e-25 | 3 |
ciliary body | 1.13e-25 | 3 |
atypical epithelium | 2.02e-19 | 4 |
abdomen connective tissue | 1.59e-17 | 2 |
abdominal segment connective tissue | 1.59e-17 | 2 |
trunk connective tissue | 1.59e-17 | 2 |
interstitial tissue | 1.59e-17 | 2 |
extraglomerular mesangium | 1.59e-17 | 2 |
kidney interstitium | 1.59e-17 | 2 |
juxtaglomerular apparatus | 1.59e-17 | 2 |
mesangium | 1.59e-17 | 2 |
vasculature of eye | 3.80e-13 | 6 |
uvea | 3.80e-13 | 6 |
vasculature of head | 3.80e-13 | 6 |
pigment epithelium of eye | 2.76e-12 | 11 |
duct | 6.43e-11 | 19 |
hepatopancreatic ampulla | 3.74e-10 | 1 |
extrahepatic bile duct | 3.74e-10 | 1 |
common bile duct | 3.74e-10 | 1 |
duodenal papilla | 3.74e-10 | 1 |
anterior segment of eyeball | 1.09e-09 | 14 |
stroma | 3.16e-09 | 4 |
nephron tubule epithelium | 5.00e-08 | 10 |
pancreas | 5.64e-08 | 10 |
vasculature of organ | 2.14e-07 | 11 |
camera-type eye | 8.00e-07 | 20 |
simple eye | 8.00e-07 | 20 |
immature eye | 8.00e-07 | 20 |
ocular region | 8.00e-07 | 20 |
eyeball of camera-type eye | 8.00e-07 | 20 |
optic cup | 8.00e-07 | 20 |
optic vesicle | 8.00e-07 | 20 |
eye primordium | 8.00e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.88e-10 | 1 |
meningioma | 6.88e-10 | 1 |