FFCP PHASE1:Hg19::chr12:113344755..113344805,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:113344755..113344805,+
|short_description=p1@OAS1
|description=CAGE_peak_1_at_OAS1_5end
|association_with_transcript=0bp_to_ENST00000549820,ENST0000055088...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4938 | |EntrezGene=4938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8086 | |HGNC=8086 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWE7,F8VPW7 | |UniProt=B4DWE7,F8VPW7 | ||
|association_with_transcript=0bp_to_ENST00000549820,ENST00000550883_5end | |||
|cluster_id=chr12:113344755..113344805,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_OAS1_5end | |||
|id=chr12:113344755..113344805,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.24e-32!119;CL:0000738!1.13e-30!140;CL:0002031!7.93e-28!124;CL:0000766!1.38e-24!76;CL:0002194!1.42e-24!63;CL:0000576!1.42e-24!63;CL:0000040!1.42e-24!63;CL:0000559!1.42e-24!63;CL:0002009!1.01e-22!65;CL:0000839!2.38e-22!70;CL:0000557!5.82e-22!71;CL:0000860!2.30e-21!45;CL:0002057!5.34e-21!42;CL:0000037!1.77e-19!172;CL:0000566!1.77e-19!172;CL:0002032!1.77e-18!165;CL:0000837!1.77e-18!165;CL:0000988!1.19e-16!182;CL:0000763!9.95e-11!112;CL:0000049!9.95e-11!112;CL:0000945!3.03e-09!24;CL:0000826!3.03e-09!24;CL:0000542!4.24e-08!53;CL:0000051!4.24e-08!53;CL:0000838!6.96e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.27e-15;33!CL:0002057;2.27e-15;33!CL:0000473;3.25e-15;39!CL:0000234;3.25e-15;39!CL:0000576;1.74e-14;48!CL:0000766;3.03e-11;69!CL:0002087;1.61e-09;104!CL:0000945;1.74e-09;24!CL:0000738;1.31e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.52e-32,115;CL:0000738,4.86e-31,136;CL:0002031,4.44e-28,120;CL:0002194,1.69e-25,59;CL:0000576,1.69e-25,59;CL:0000040,1.69e-25,59;CL:0000559,1.69e-25,59;CL:0000766,2.45e-25,72;CL:0000473,1.77e-24,48;CL:0000234,1.77e-24,48;CL:0002009,2.13e-23,61;CL:0000839,4.23e-23,66;CL:0000557,1.59e-22,67;CL:0000860,1.55e-21,42;CL:0002057,1.55e-21,42;CL:0000037,7.96e-20,168;CL:0002032,1.02e-18,161;CL:0000837,1.02e-18,161;CL:0000988,5.59e-17,177;CL:0000763,5.65e-11,108;CL:0000049,5.65e-11,108;CL:0000945,1.86e-09,24;CL:0000826,1.86e-09,24;CL:0000542,4.63e-08,53;CL:0000051,4.63e-08,53;CL:0000838,7.67e-08,52 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-23!102;UBERON:0003061!3.17e-23!102;UBERON:0002193!1.42e-22!112;UBERON:0002371!2.92e-19!80;UBERON:0002405!8.53e-17!115;UBERON:0001474!4.17e-16!86;UBERON:0004765!9.39e-14!101;UBERON:0001434!9.39e-14!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.87e-23,98;UBERON:0003061,2.87e-23,98;UBERON:0002193,8.39e-23,108;UBERON:0002405,3.37e-21,93;UBERON:0002371,1.68e-19,76;UBERON:0001474,8.18e-16,82;UBERON:0004765,1.06e-13,90;UBERON:0001434,7.47e-12,100 | |||
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| ||
|short_description=p1@OAS1 | |||
}} | }} |
Latest revision as of 11:37, 16 September 2015
Short description: | p1@OAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OAS1_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000549820, ENST00000550883_5end |
EntrezGene: | OAS1 |
HGNC: | 8086 |
UniProt: | B4DWE7F8VPW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.52e-32 | 115 |
leukocyte | 4.86e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 4.44e-28 | 120 |
monopoietic cell | 1.69e-25 | 59 |
monocyte | 1.69e-25 | 59 |
monoblast | 1.69e-25 | 59 |
promonocyte | 1.69e-25 | 59 |
myeloid leukocyte | 2.45e-25 | 72 |
defensive cell | 1.77e-24 | 48 |
phagocyte | 1.77e-24 | 48 |
macrophage dendritic cell progenitor | 2.13e-23 | 61 |
myeloid lineage restricted progenitor cell | 4.23e-23 | 66 |
granulocyte monocyte progenitor cell | 1.59e-22 | 67 |
classical monocyte | 1.55e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-21 | 42 |
hematopoietic stem cell | 7.96e-20 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-18 | 161 |
hematopoietic cell | 5.59e-17 | 177 |
myeloid cell | 5.65e-11 | 108 |
common myeloid progenitor | 5.65e-11 | 108 |
lymphocyte of B lineage | 1.86e-09 | 24 |
pro-B cell | 1.86e-09 | 24 |
lymphocyte | 4.63e-08 | 53 |
common lymphoid progenitor | 4.63e-08 | 53 |
lymphoid lineage restricted progenitor cell | 7.67e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.87e-23 | 98 |
blood island | 2.87e-23 | 98 |
hemolymphoid system | 8.39e-23 | 108 |
immune system | 3.37e-21 | 93 |
bone marrow | 1.68e-19 | 76 |
bone element | 8.18e-16 | 82 |
skeletal element | 1.06e-13 | 90 |
skeletal system | 7.47e-12 | 100 |