FFCP PHASE1:Hg19::chr2:238671929..238671943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238671929..238671943,+ | |||
|coexpression_cluster_id=C829 | |||
|description=CAGE_peak_at_chr2:238671929..238671943,+ | |description=CAGE_peak_at_chr2:238671929..238671943,+ | ||
|id=chr2:238671929..238671943,+ | |id=chr2:238671929..238671943,+ | ||
|ontology_enrichment_celltype=CL:0002009!4.87e-25!65;CL:0002194!8.23e-25!63;CL:0000576!8.23e-25!63;CL:0000040!8.23e-25!63;CL:0000559!8.23e-25!63;CL:0002087!4.82e-24!119;CL:0000557!1.79e-23!71;CL:0000839!3.85e-23!70;CL:0000766!3.90e-23!76;CL:0000738!6.74e-23!140;CL:0002057!1.27e-22!42;CL:0000860!1.56e-22!45;CL:0002031!1.76e-22!124;CL:0002032!4.57e-22!165;CL:0000837!4.57e-22!165;CL:0000037!8.68e-21!172;CL:0000566!8.68e-21!172;CL:0000763!4.12e-20!112;CL:0000049!4.12e-20!112;CL:0000988!1.75e-18!182;CL:0000134!1.83e-10!358;CL:0000063!3.16e-10!578;CL:0002320!2.87e-09!365;CL:0000219!5.41e-08!390 | |ontology_enrichment_celltype=CL:0002009!4.87e-25!65;CL:0002194!8.23e-25!63;CL:0000576!8.23e-25!63;CL:0000040!8.23e-25!63;CL:0000559!8.23e-25!63;CL:0002087!4.82e-24!119;CL:0000557!1.79e-23!71;CL:0000839!3.85e-23!70;CL:0000766!3.90e-23!76;CL:0000738!6.74e-23!140;CL:0002057!1.27e-22!42;CL:0000860!1.56e-22!45;CL:0002031!1.76e-22!124;CL:0002032!4.57e-22!165;CL:0000837!4.57e-22!165;CL:0000037!8.68e-21!172;CL:0000566!8.68e-21!172;CL:0000763!4.12e-20!112;CL:0000049!4.12e-20!112;CL:0000988!1.75e-18!182;CL:0000134!1.83e-10!358;CL:0000063!3.16e-10!578;CL:0002320!2.87e-09!365;CL:0000219!5.41e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.39e-24;33!CL:0002057;6.39e-24;33!CL:0000473;1.91e-21;39!CL:0000234;1.91e-21;39!CL:0000576;6.21e-18;48!CL:0000766;2.63e-12;69!CL:0002087;3.46e-09;104!CL:0000738;5.12e-08;136!CL:0000763;5.91e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.92e-29,48;CL:0000234,6.92e-29,48;CL:0002087,1.25e-27,115;CL:0002194,2.81e-27,59;CL:0000576,2.81e-27,59;CL:0000040,2.81e-27,59;CL:0000559,2.81e-27,59;CL:0000860,3.79e-27,42;CL:0002057,3.79e-27,42;CL:0002009,4.95e-27,61;CL:0000738,5.29e-26,136;CL:0000766,9.55e-25,72;CL:0000557,2.42e-24,67;CL:0002031,4.18e-24,120;CL:0002032,8.41e-24,161;CL:0000837,8.41e-24,161;CL:0000839,9.29e-24,66;CL:0000037,4.07e-23,168;CL:0000988,3.54e-21,177;CL:0000763,2.23e-20,108;CL:0000049,2.23e-20,108;CL:0000134,5.96e-12,354;CL:0002320,4.48e-11,361;CL:0000219,1.25e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-20;42!CL:0000049;6.00e-07;108 | |||
|ontology_enrichment_disease=DOID:162!3.42e-09!235;DOID:14566!1.32e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.00e-21!102;UBERON:0003061!2.00e-21!102;UBERON:0002371!7.59e-19!80;UBERON:0002193!3.36e-17!112;UBERON:0001474!2.92e-16!86;UBERON:0004765!4.67e-13!101;UBERON:0001434!4.67e-13!101;UBERON:0002405!1.30e-11!115;UBERON:0002384!1.51e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-22,98;UBERON:0003061,1.21e-22,98;UBERON:0002371,1.95e-20,76;UBERON:0002193,3.52e-19,108;UBERON:0001474,7.36e-18,82;UBERON:0004765,3.64e-16,90;UBERON:0002405,3.66e-15,93;UBERON:0001434,7.41e-13,100;UBERON:0002384,2.93e-10,371 | |||
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| ||
|short_description=p@chr2:238671929..238671943,+ | |short_description=p@chr2:238671929..238671943,+ | ||
}} | }} |
Latest revision as of 08:16, 29 July 2015
Short description: | p@chr2:238671929..238671943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238671929..238671943, + |
Coexpression cluster: | C829_Neutrophils_CD14_Monocytederived_Prostate_acute_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.92e-29 | 48 |
phagocyte | 6.92e-29 | 48 |
nongranular leukocyte | 1.25e-27 | 115 |
monopoietic cell | 2.81e-27 | 59 |
monocyte | 2.81e-27 | 59 |
monoblast | 2.81e-27 | 59 |
promonocyte | 2.81e-27 | 59 |
classical monocyte | 3.79e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.79e-27 | 42 |
macrophage dendritic cell progenitor | 4.95e-27 | 61 |
leukocyte | 5.29e-26 | 136 |
myeloid leukocyte | 9.55e-25 | 72 |
granulocyte monocyte progenitor cell | 2.42e-24 | 67 |
hematopoietic lineage restricted progenitor cell | 4.18e-24 | 120 |
hematopoietic oligopotent progenitor cell | 8.41e-24 | 161 |
hematopoietic multipotent progenitor cell | 8.41e-24 | 161 |
myeloid lineage restricted progenitor cell | 9.29e-24 | 66 |
hematopoietic stem cell | 4.07e-23 | 168 |
hematopoietic cell | 3.54e-21 | 177 |
myeloid cell | 2.23e-20 | 108 |
common myeloid progenitor | 2.23e-20 | 108 |
mesenchymal cell | 5.96e-12 | 354 |
connective tissue cell | 4.48e-11 | 361 |
motile cell | 1.25e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-22 | 98 |
blood island | 1.21e-22 | 98 |
bone marrow | 1.95e-20 | 76 |
hemolymphoid system | 3.52e-19 | 108 |
bone element | 7.36e-18 | 82 |
skeletal element | 3.64e-16 | 90 |
immune system | 3.66e-15 | 93 |
skeletal system | 7.41e-13 | 100 |
connective tissue | 2.93e-10 | 371 |