FFCP PHASE1:Hg19::chr12:114841717..114841726,-: Difference between revisions
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|id=chr12:114841717..114841726,-
|short_description=p15@TBX5
|description=CAGE_peak_15_at_TBX5_5end
|association_with_transcript=-14bp_to_,14bp_to_ENST00000526441,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=Q99593 | |UniProt=Q99593 | ||
|association_with_transcript=-14bp_to_,14bp_to_ENST00000526441,NM_080718,uc010syv.1_5end | |||
|cluster_id=chr12:114841717..114841726,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_15_at_TBX5_5end | |||
|id=chr12:114841717..114841726,- | |||
|ontology_enrichment_celltype=CL:0002620!9.78e-24!23;CL:0002622!1.39e-08!3;CL:0000057!2.08e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.23e-66;1!UBERON:0010227;3.34e-66;1!UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease=DOID:17!3.02e-19!5;DOID:450!3.02e-19!5;DOID:66!3.02e-19!5;DOID:423!3.02e-19!5;DOID:0080000!3.02e-19!5;DOID:11722!3.02e-19!5;DOID:178!1.54e-07!1;DOID:326!1.54e-07!1;DOID:3978!1.54e-07!1;DOID:3394!1.54e-07!1;DOID:5844!1.54e-07!1;DOID:6193!4.34e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:171;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.64e-13!40;UBERON:0002199!2.82e-11!45;UBERON:0002416!2.82e-11!45;UBERON:0004151!2.22e-09!3;UBERON:0003102!3.71e-09!95;UBERON:0007100!8.44e-08!27;UBERON:0002079!1.06e-07!1;UBERON:0002135!1.20e-07!1;UBERON:0002084!1.27e-07!1;UBERON:0002082!1.27e-07!1;UBERON:0004706!1.27e-07!1;UBERON:0002171!1.85e-07!1;UBERON:0006518!1.85e-07!1;UBERON:0008949!1.85e-07!1;UBERON:0000101!1.85e-07!1;UBERON:0002167!1.85e-07!1;UBERON:0005153!6.99e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;3.34e-66;1!UBERON:0002081;5.96e-34;2!UBERON:0004151;3.66e-23;3!UBERON:0002346;9.45e-18;4!UBERON:0000923;9.45e-18;4!UBERON:0010316;9.45e-18;4!UBERON:0005291;9.45e-18;4!UBERON:0002050;1.71e-14;5!UBERON:0005423;1.71e-14;5!UBERON:0000948;3.89e-13;22!UBERON:0007100;1.06e-11;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.39e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0004151,3.27e-23,3;UBERON:0000948,3.75e-12,24;UBERON:0005498,3.75e-12,24;UBERON:0004140,3.75e-12,24;UBERON:0009881,3.75e-12,24;UBERON:0004141,3.75e-12,24;UBERON:0003084,3.75e-12,24;UBERON:0007005,3.75e-12,24;UBERON:0004139,3.75e-12,24;UBERON:0004291,3.75e-12,24;UBERON:0007100,6.25e-11,27 | |||
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|short_description=p15@TBX5 | |||
}} | }} |
Latest revision as of 14:08, 16 September 2015
Short description: | p15@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TBX5_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -14bp_to_, 14bp_to_ENST00000526441, NM_080718, uc010syv.1_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.39e-66 | 1 |
cardiac atrium | 5.04e-34 | 2 |
future cardiac atrium | 5.04e-34 | 2 |
cardiac chamber | 3.27e-23 | 3 |
heart | 3.75e-12 | 24 |
primitive heart tube | 3.75e-12 | 24 |
primary heart field | 3.75e-12 | 24 |
anterior lateral plate mesoderm | 3.75e-12 | 24 |
heart tube | 3.75e-12 | 24 |
heart primordium | 3.75e-12 | 24 |
cardiac mesoderm | 3.75e-12 | 24 |
cardiogenic plate | 3.75e-12 | 24 |
heart rudiment | 3.75e-12 | 24 |
primary circulatory organ | 6.25e-11 | 27 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.56e-08 | 10 |