FFCP PHASE1:Hg19::chr2:47054995..47055016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100134259 | |EntrezGene=100134259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000490950,NR_024452,uc002rvi.3_5end | |association_with_transcript=0bp_to_ENST00000490950,NR_024452,uc002rvi.3_5end | ||
|cluster_id=chr2:47054995..47055016,+ | |||
|coexpression_cluster_id=C4233 | |||
|description=CAGE_peak_2_at_LOC100134259_5end | |description=CAGE_peak_2_at_LOC100134259_5end | ||
|id=chr2:47054995..47055016,+ | |id=chr2:47054995..47055016,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.59e-26!180;CL:0000057!2.08e-24!75;CL:0002620!5.10e-22!23;CL:0000048!3.51e-18!430;CL:0000723!1.45e-17!436;CL:0000034!9.05e-17!444;CL:0002334!6.99e-16!12;CL:0000188!1.93e-13!9;CL:0002320!2.29e-13!365;CL:0000134!9.76e-12!358;CL:0002371!1.80e-11!591;CL:0000219!2.08e-10!390;CL:0000144!2.20e-10!625;CL:0002570!2.30e-08!8;CL:0002092!4.84e-08!10;CL:0000548!9.81e-08!679;CL:0000004!9.81e-08!679;CL:0000255!9.81e-08!679;CL:0002540!1.07e-07!6;CL:0002559!1.17e-07!4;CL:0000012!1.42e-07!682;CL:0000680!3.55e-07!57;CL:0000056!3.55e-07!57;CL:0000355!3.55e-07!57;CL:0000515!4.70e-07!4 | |ontology_enrichment_celltype=CL:0000055!8.59e-26!180;CL:0000057!2.08e-24!75;CL:0002620!5.10e-22!23;CL:0000048!3.51e-18!430;CL:0000723!1.45e-17!436;CL:0000034!9.05e-17!444;CL:0002334!6.99e-16!12;CL:0000188!1.93e-13!9;CL:0002320!2.29e-13!365;CL:0000134!9.76e-12!358;CL:0002371!1.80e-11!591;CL:0000219!2.08e-10!390;CL:0000144!2.20e-10!625;CL:0002570!2.30e-08!8;CL:0002092!4.84e-08!10;CL:0000548!9.81e-08!679;CL:0000004!9.81e-08!679;CL:0000255!9.81e-08!679;CL:0002540!1.07e-07!6;CL:0002559!1.17e-07!4;CL:0000012!1.42e-07!682;CL:0000680!3.55e-07!57;CL:0000056!3.55e-07!57;CL:0000355!3.55e-07!57;CL:0000515!4.70e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.19e-33;23!CL:0002570;7.33e-11;8!CL:0000723;2.63e-10;61!CL:0002540;2.48e-09;6!CL:0000134;3.32e-09;55!CL:0000048;9.60e-09;58!CL:0000057;1.06e-08;73!CL:0000034;1.46e-08;69!CL:0002583;1.72e-08;2!CL:0002092;2.18e-08;10!CL:0000680;1.15e-07;7!CL:0002334;2.99e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.50e-33,23;CL:0000057,2.39e-19,76;CL:0000048,4.69e-12,427;CL:0000723,1.02e-11,433;CL:0000034,2.75e-11,441;CL:0002570,5.91e-11,8;CL:0002320,8.90e-10,361;CL:0000134,1.68e-09,354;CL:0002540,2.96e-09,6;CL:0002583,1.63e-08,2;CL:0000219,2.20e-08,386;CL:0002092,2.58e-08,10;CL:0002334,2.64e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.87e-09!5;DOID:450!2.87e-09!5;DOID:66!2.87e-09!5;DOID:423!2.87e-09!5;DOID:0080000!2.87e-09!5;DOID:11722!2.87e-09!5;DOID:2394!5.13e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;7.32e-11;5!DOID:450;7.32e-11;5!DOID:66;7.32e-11;5!DOID:423;7.32e-11;5!DOID:0080000;7.32e-11;5!DOID:11722;7.32e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.81e-11,5;DOID:450,8.81e-11,5;DOID:66,8.81e-11,5;DOID:423,8.81e-11,5;DOID:0080000,8.81e-11,5;DOID:11722,8.81e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!8.77e-21!45;UBERON:0002416!8.77e-21!45;UBERON:0002097!4.80e-18!40;UBERON:0002384!1.99e-14!375;UBERON:0000914!3.16e-12!83;UBERON:0002329!3.16e-12!83;UBERON:0003077!3.16e-12!83;UBERON:0003059!3.16e-12!83;UBERON:0007282!3.16e-12!83;UBERON:0009618!3.16e-12!83;UBERON:0007285!3.16e-12!83;UBERON:0004290!7.23e-11!70;UBERON:0003102!4.73e-10!95;UBERON:0000486!7.50e-10!82;UBERON:0002067!8.00e-09!9;UBERON:0004016!8.00e-09!9;UBERON:0010083!8.00e-09!9;UBERON:0002073!1.17e-07!4;UBERON:0005086!1.17e-07!4;UBERON:0001013!1.63e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.33e-19;41!UBERON:0002199;4.93e-16;46!UBERON:0002416;4.93e-16;46!UBERON:0003102;7.45e-15;50!UBERON:0002067;6.63e-09;9!UBERON:0001013;1.82e-08;14!UBERON:0002072;3.98e-07;5!UBERON:0002371;6.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,5.77e-30,46;UBERON:0002416,5.77e-30,46;UBERON:0002097,1.17e-24,41;UBERON:0003102,4.01e-12,99;UBERON:0002384,1.01e-10,371;UBERON:0002067,6.53e-09,9;UBERON:0004016,6.53e-09,9;UBERON:0010083,6.53e-09,9;UBERON:0001013,1.59e-08,14;UBERON:0002072,3.91e-07,5 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,3.15859936713415,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,1.29177948508141,2.42809416552197,1.54495887372473,0.204154171254893,0,0,0,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0,0,1.5324389789951,0.150238058906597,0,1.4351170855109,0.85422955527427,6.99375273826554,1.20036438433761,2.67936576019941,2.06112432036503,2.41951913231067,2.36286865137773,3.21542117031955,4.29137416214995,4.32634523618807,0,3.55009592516614,2.72030665214629,4.23901480776219,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,5.52539685409922,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7296933755565,0,0.531876233169741,1.04007436911366,0.514414748524284,0,2.66422179016099,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,8.5582143024431,0.289562613335158,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0,0,0,0,0.585707074963566,0,0,0,1.99267679560631,1.84369168541703,0.60818530127658,0,0,0,0,0,0,0,0,0.496215615637554,1.68808170616869,0.561320188866147,0.512556597022804,0.511707249066704,0.321707842287215,0,5.85996836450091,10.6537035187876,7.55569835327044,0.519254429183621,5.81051892299796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.770243085573222,0.15350367472613,1.51620229732984,1.39646318328756,0.580066775656914,1.27839941124151,0.0890320356467374,0,0,0,0,2.32422774648643,0.94443704049192,2.7881490806424,0,0,1.73986598415015,0,0,0,0,0,0.255897791311334,0,3.81843897511124,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,4.08931252285012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76124975011745,3.03827302801392,3.88364103051829,3.03044808440143,3.0188148210309,2.66943366478961,0,0.604923695052956,1.24349760466224,0.591420599958536,0.159296767163702,0,0.310525913752519,3.7323558705677,6.64604286394987,1.5652351854352,0.450772826991655,0,0,5.27361111687422,0,10.2087427173269,0,0,0,0.673498977531838,0,0,0,0,0.453411851024545,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0,3.42898616795984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0586880643807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,3.15859936713415,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,1.29177948508141,2.42809416552197,1.54495887372473,0.204154171254893,0,0,0,0.247266929278557,0,1.43723628363248,0,0.125118519871964,0,0,1.5324389789951,0.150238058906597,0,1.4351170855109,0.85422955527427,6.99375273826554,1.20036438433761,2.67936576019941,2.06112432036503,2.41951913231067,2.36286865137773,3.21542117031955,4.29137416214995,4.32634523618807,0,3.55009592516614,2.72030665214629,4.23901480776219,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,5.52539685409922,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7296933755565,0,0.531876233169741,1.04007436911366,0.514414748524284,0,2.66422179016099,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,8.5582143024431,0.289562613335158,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0,0,0,0,0.585707074963566,0,0,0,1.99267679560631,1.84369168541703,0.60818530127658,0,0,0,0,0,0,0,0,0.496215615637554,1.68808170616869,0.561320188866147,0.512556597022804,0.511707249066704,0.321707842287215,0,5.85996836450091,10.6537035187876,7.55569835327044,0.519254429183621,5.81051892299796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.770243085573222,0.15350367472613,1.51620229732984,1.39646318328756,0.580066775656914,1.27839941124151,0.0890320356467374,0,0,0,0,2.32422774648643,0.94443704049192,2.7881490806424,0,0,1.73986598415015,0,0,0,0,0,0.255897791311334,0,3.81843897511124,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,4.08931252285012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76124975011745,3.03827302801392,3.88364103051829,3.03044808440143,3.0188148210309,2.66943366478961,0,0.604923695052956,1.24349760466224,0.591420599958536,0.159296767163702,0,0.310525913752519,3.7323558705677,6.64604286394987,1.5652351854352,0.450772826991655,0,0,5.27361111687422,0,10.2087427173269,0,0,0,0.673498977531838,0,0,0,0,0.453411851024545,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0,3.42898616795984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0586880643807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LOC100134259 | |short_description=p2@LOC100134259 | ||
}} | }} |
Latest revision as of 11:16, 17 September 2015
Short description: | p2@LOC100134259 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100134259_5end |
Coexpression cluster: | C4233_Preadipocyte_mesenchymal_Fibroblast_Smooth_bone_Hair_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000490950, NR_024452, uc002rvi.3_5end |
EntrezGene: | LOC100134259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.50e-33 | 23 |
fibroblast | 2.39e-19 | 76 |
multi fate stem cell | 4.69e-12 | 427 |
somatic stem cell | 1.02e-11 | 433 |
stem cell | 2.75e-11 | 441 |
mesenchymal stem cell of adipose | 5.91e-11 | 8 |
connective tissue cell | 8.90e-10 | 361 |
mesenchymal cell | 1.68e-09 | 354 |
mesenchymal stem cell of the bone marrow | 2.96e-09 | 6 |
subcutaneous preadipocyte | 1.63e-08 | 2 |
motile cell | 2.20e-08 | 386 |
bone marrow cell | 2.58e-08 | 10 |
preadipocyte | 2.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 5.77e-30 | 46 |
integumental system | 5.77e-30 | 46 |
skin of body | 1.17e-24 | 41 |
surface structure | 4.01e-12 | 99 |
connective tissue | 1.01e-10 | 371 |
dermis | 6.53e-09 | 9 |
dermatome | 6.53e-09 | 9 |
future dermis | 6.53e-09 | 9 |
adipose tissue | 1.59e-08 | 14 |
hypodermis | 3.91e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.81e-11 | 5 |
myotonic disease | 8.81e-11 | 5 |
muscle tissue disease | 8.81e-11 | 5 |
myopathy | 8.81e-11 | 5 |
muscular disease | 8.81e-11 | 5 |
myotonic dystrophy | 8.81e-11 | 5 |