FFCP PHASE1:Hg19::chr2:54784321..54784355,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:54784321..54784355,+ | |||
|description=CAGE_peak_at_chr2:54784321..54784355,+ | |description=CAGE_peak_at_chr2:54784321..54784355,+ | ||
|id=chr2:54784321..54784355,+ | |id=chr2:54784321..54784355,+ | ||
|ontology_enrichment_celltype=CL:0000077!7.32e-17!19;CL:0002615!4.95e-07!3 | |ontology_enrichment_celltype=CL:0000077!7.32e-17!19;CL:0002615!4.95e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002195;4.12e-25;2!CL:0002571;4.12e-25;2!CL:0002615;1.88e-16;3!CL:0000632;1.88e-16;3!CL:0000077;2.34e-15;19!CL:0000511;1.71e-13;1!CL:0002625;1.71e-13;1!CL:0000216;1.71e-13;1!CL:0002581;2.46e-13;1!CL:0002097;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.89e-25,2;CL:0002571,3.89e-25,2;CL:0002615,2.04e-16,3;CL:0000632,2.58e-16,3;CL:0000077,1.76e-15,19;CL:0000511,1.82e-13,1;CL:0002625,1.82e-13,1;CL:0000216,1.82e-13,1;CL:0002581,2.32e-13,1;CL:0002097,3.70e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;2.46e-13;1!DOID:3571;5.70e-13;1!DOID:74;2.66e-07;2!DOID:3350;4.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.62e-13,1;DOID:3571,9.73e-13,1;DOID:74,2.74e-07,2;DOID:3350,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002417!5.01e-13!61;UBERON:0000916!5.01e-13!61;UBERON:0003688!1.15e-08!6;UBERON:0002358!1.15e-08!6;UBERON:0003684!1.15e-08!6;UBERON:0001178!1.15e-08!6;UBERON:0005172!1.19e-08!55;UBERON:0005173!1.19e-08!55;UBERON:0009569!3.80e-08!113;UBERON:0002323!3.92e-08!46;UBERON:0004923!1.14e-07!57;UBERON:0004458!2.33e-07!49;UBERON:0004457!3.53e-07!12;UBERON:0000042!3.53e-07!12;UBERON:0007625!4.72e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.14e-18;6!UBERON:0002358;5.14e-18;6!UBERON:0003684;5.14e-18;6!UBERON:0001178;5.14e-18;6!UBERON:0001136;1.71e-13;1!UBERON:0001343;1.71e-13;1!UBERON:0004910;1.71e-13;1!UBERON:0004813;1.71e-13;1!UBERON:0004457;3.22e-12;9!UBERON:0000042;3.22e-12;9!UBERON:0002107;3.11e-10;19!UBERON:0006925;3.11e-10;19!UBERON:0002368;1.75e-08;33!UBERON:0000949;3.33e-08;43!UBERON:0002423;8.01e-08;25!UBERON:0004909;2.21e-07;2!UBERON:0005406;2.66e-07;2!UBERON:0002417;3.77e-07;58!UBERON:0000916;3.77e-07;58!UBERON:0002323;5.40e-07;45!UBERON:0000473;7.43e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.31e-18,6;UBERON:0002358,6.31e-18,6;UBERON:0003684,6.31e-18,6;UBERON:0001178,6.31e-18,6;UBERON:0001136,1.82e-13,1;UBERON:0001343,1.82e-13,1;UBERON:0004910,1.82e-13,1;UBERON:0005154,1.82e-13,1;UBERON:0005295,1.82e-13,1;UBERON:0004813,1.82e-13,1;UBERON:0005297,1.82e-13,1;UBERON:0005294,1.82e-13,1;UBERON:0010141,1.82e-13,1;UBERON:0005891,1.82e-13,1;UBERON:0002417,1.29e-11,60;UBERON:0000916,1.29e-11,60;UBERON:0002107,3.39e-10,19;UBERON:0006925,3.39e-10,19;UBERON:0008836,3.39e-10,19;UBERON:0004457,2.93e-09,12;UBERON:0000042,2.93e-09,12;UBERON:0000949,4.83e-09,45;UBERON:0008835,7.81e-09,22;UBERON:0003894,7.81e-09,22;UBERON:0002323,8.70e-09,46;UBERON:0009854,1.86e-08,23;UBERON:0002368,2.38e-08,35;UBERON:0004458,3.17e-08,49;UBERON:0007499,8.53e-08,25;UBERON:0009497,8.53e-08,25;UBERON:0000015,8.53e-08,25;UBERON:0002423,8.53e-08,25;UBERON:0006235,8.53e-08,25;UBERON:0004161,8.53e-08,25;UBERON:0009856,1.68e-07,26;UBERON:0003886,1.99e-07,54;UBERON:0004909,2.28e-07,2;UBERON:0005406,2.58e-07,2;UBERON:0000473,7.01e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,1.69145284915165,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71742783511184,0,0,0,4.97548728239564,0,1.50719688529793,0,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,1.15325234330131,0,0.64341568457443,2.96836132889982,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,1.19472429772959,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0.0824158583811665,0.202210631562555,0.0984274815147488,2.28617996577618,0,0,0,0,0,0,0,0,0,0.315222829196793,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0,0,0,0,0,0,0,0,0,0.385239660814607,1.50109113962448,0,0.453411851024545,0.694567422971502,0.244736704506468,0.179088841081487,1.85280868296583,0.877136198314828,0.176689145945881,0,0.168942440653073,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,1.50424523575425,0,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,1.69145284915165,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71742783511184,0,0,0,4.97548728239564,0,1.50719688529793,0,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0,1.15325234330131,0,0.64341568457443,2.96836132889982,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,1.19472429772959,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0.0824158583811665,0.202210631562555,0.0984274815147488,2.28617996577618,0,0,0,0,0,0,0,0,0,0.315222829196793,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0,0,0,0,0,0,0,0,0,0.385239660814607,1.50109113962448,0,0.453411851024545,0.694567422971502,0.244736704506468,0.179088841081487,1.85280868296583,0.877136198314828,0.176689145945881,0,0.168942440653073,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,1.50424523575425,0,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:54784321..54784355,+ | |short_description=p@chr2:54784321..54784355,+ | ||
}} | }} |
Latest revision as of 10:50, 29 July 2015
Short description: | p@chr2:54784321..54784355, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:54784321..54784355, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.89e-25 | 2 |
hepatic mesenchymal stem cell | 3.89e-25 | 2 |
adipocyte of omentum tissue | 2.04e-16 | 3 |
hepatic stellate cell | 2.58e-16 | 3 |
mesothelial cell | 1.76e-15 | 19 |
androgen binding protein secreting cell | 1.82e-13 | 1 |
seminiferous tubule epithelial cell | 1.82e-13 | 1 |
Sertoli cell | 1.82e-13 | 1 |
perirenal preadipocyte | 2.32e-13 | 1 |
cortical cell of adrenal gland | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.62e-13 | 1 |
liver cancer | 9.73e-13 | 1 |
hematopoietic system disease | 2.74e-07 | 2 |
mesenchymal cell neoplasm | 5.28e-07 | 2 |