FFCP PHASE1:Hg19::chr19:18390896..18390921,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18390896..18390921,- | |||
|coexpression_cluster_id=C922 | |||
|description=CAGE_peak_at_chr19:18390896..18390921,- | |description=CAGE_peak_at_chr19:18390896..18390921,- | ||
|id=chr19:18390896..18390921,- | |id=chr19:18390896..18390921,- | ||
|ontology_enrichment_celltype=CL:0000738!3.08e-19!140;CL:0000988!1.63e-17!182;CL:0000037!1.27e-16!172;CL:0000566!1.27e-16!172;CL:0002031!3.11e-15!124;CL:0002032!7.07e-15!165;CL:0000837!7.07e-15!165;CL:0002057!8.16e-15!42;CL:0002087!1.01e-14!119;CL:0000860!8.46e-13!45;CL:0000766!4.18e-12!76;CL:0000557!4.45e-10!71;CL:0000839!7.50e-10!70;CL:0000763!1.35e-09!112;CL:0000049!1.35e-09!112;CL:0002009!2.28e-09!65;CL:0002194!1.16e-08!63;CL:0000576!1.16e-08!63;CL:0000040!1.16e-08!63;CL:0000559!1.16e-08!63 | |ontology_enrichment_celltype=CL:0000738!3.08e-19!140;CL:0000988!1.63e-17!182;CL:0000037!1.27e-16!172;CL:0000566!1.27e-16!172;CL:0002031!3.11e-15!124;CL:0002032!7.07e-15!165;CL:0000837!7.07e-15!165;CL:0002057!8.16e-15!42;CL:0002087!1.01e-14!119;CL:0000860!8.46e-13!45;CL:0000766!4.18e-12!76;CL:0000557!4.45e-10!71;CL:0000839!7.50e-10!70;CL:0000763!1.35e-09!112;CL:0000049!1.35e-09!112;CL:0002009!2.28e-09!65;CL:0002194!1.16e-08!63;CL:0000576!1.16e-08!63;CL:0000040!1.16e-08!63;CL:0000559!1.16e-08!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.18e-10;33!CL:0002057;4.18e-10;33!CL:0000473;1.57e-08;39!CL:0000234;1.57e-08;39!CL:0000576;5.17e-07;48!CL:0000766;7.63e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.81e-20,136;CL:0000988,8.61e-19,177;CL:0000037,2.00e-17,168;CL:0002031,3.44e-16,120;CL:0002087,1.13e-15,115;CL:0002032,1.22e-15,161;CL:0000837,1.22e-15,161;CL:0000860,8.15e-15,42;CL:0002057,8.15e-15,42;CL:0000473,1.26e-14,48;CL:0000234,1.26e-14,48;CL:0000766,2.87e-13,72;CL:0000557,3.91e-11,67;CL:0000839,6.72e-11,66;CL:0002009,1.99e-10,61;CL:0000763,2.55e-10,108;CL:0000049,2.55e-10,108;CL:0002194,1.12e-09,59;CL:0000576,1.12e-09,59;CL:0000040,1.12e-09,59;CL:0000559,1.12e-09,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.31e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.22e-11!102;UBERON:0003061!6.22e-11!102;UBERON:0002371!5.49e-10!80;UBERON:0001474!2.61e-09!86;UBERON:0002193!7.32e-09!112;UBERON:0004765!6.66e-08!101;UBERON:0001434!6.66e-08!101;UBERON:0002405!2.53e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!6.22e-11!102;UBERON:0003061!6.22e-11!102;UBERON:0002371!5.49e-10!80;UBERON:0001474!2.61e-09!86;UBERON:0002193!7.32e-09!112;UBERON:0004765!6.66e-08!101;UBERON:0001434!6.66e-08!101;UBERON:0002405!2.53e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.68e-12,98;UBERON:0003061,8.68e-12,98;UBERON:0002371,6.07e-11,76;UBERON:0004765,2.61e-10,90;UBERON:0001474,3.65e-10,82;UBERON:0002193,1.52e-09,108;UBERON:0001434,3.72e-09,100;UBERON:0002405,3.57e-07,93 | |||
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| ||
|short_description=p@chr19:18390896..18390921,- | |short_description=p@chr19:18390896..18390921,- | ||
}} | }} |
Latest revision as of 05:07, 26 July 2015
Short description: | p@chr19:18390896..18390921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18390896..18390921, - |
Coexpression cluster: | C922_Mast_Eosinophils_mature_Basophils_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.81e-20 | 136 |
hematopoietic cell | 8.61e-19 | 177 |
hematopoietic stem cell | 2.00e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 3.44e-16 | 120 |
nongranular leukocyte | 1.13e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.22e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-15 | 161 |
classical monocyte | 8.15e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.15e-15 | 42 |
defensive cell | 1.26e-14 | 48 |
phagocyte | 1.26e-14 | 48 |
myeloid leukocyte | 2.87e-13 | 72 |
granulocyte monocyte progenitor cell | 3.91e-11 | 67 |
myeloid lineage restricted progenitor cell | 6.72e-11 | 66 |
macrophage dendritic cell progenitor | 1.99e-10 | 61 |
myeloid cell | 2.55e-10 | 108 |
common myeloid progenitor | 2.55e-10 | 108 |
monopoietic cell | 1.12e-09 | 59 |
monocyte | 1.12e-09 | 59 |
monoblast | 1.12e-09 | 59 |
promonocyte | 1.12e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.68e-12 | 98 |
blood island | 8.68e-12 | 98 |
bone marrow | 6.07e-11 | 76 |
skeletal element | 2.61e-10 | 90 |
bone element | 3.65e-10 | 82 |
hemolymphoid system | 1.52e-09 | 108 |
skeletal system | 3.72e-09 | 100 |
immune system | 3.57e-07 | 93 |