FFCP PHASE1:Hg19::chr19:35607214..35607234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5349 | |EntrezGene=5349 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4027 | |HGNC=4027 | ||
|TSSclassifier=strong | |||
|UniProt=Q14802 | |UniProt=Q14802 | ||
|association_with_transcript=0bp_to_ENST00000406988_5end | |association_with_transcript=0bp_to_ENST00000406988_5end | ||
|cluster_id=chr19:35607214..35607234,+ | |||
|description=CAGE_peak_1_at_FXYD3_5end | |description=CAGE_peak_1_at_FXYD3_5end | ||
|id=chr19:35607214..35607234,+ | |id=chr19:35607214..35607234,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.46e-29!254;CL:0002076!1.31e-22!43;CL:0000223!1.85e-19!59;CL:0002251!1.11e-12!21;CL:0002368!6.09e-10!13;CL:0002159!1.22e-08!13 | |ontology_enrichment_celltype=CL:0000066!9.46e-29!254;CL:0002076!1.31e-22!43;CL:0000223!1.85e-19!59;CL:0002251!1.11e-12!21;CL:0002368!6.09e-10!13;CL:0002159!1.22e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.96e-20;42!CL:0002251;4.59e-16;20!CL:0002368;1.43e-11;13!CL:0002159;3.68e-09;14!CL:0002202;1.03e-07;9!CL:0002632;1.03e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.74e-27,42;CL:0000066,7.54e-24,253;CL:0000223,1.67e-20,58;CL:0002251,4.66e-16,20;CL:0002368,1.43e-11,13;CL:0002159,3.59e-09,14;CL:0002202,1.03e-07,9;CL:0002632,1.03e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;6.37e-11;58 | |||
|ontology_enrichment_disease=DOID:305!2.97e-19!106;DOID:1749!1.42e-13!14;DOID:0050687!6.13e-12!143 | |ontology_enrichment_disease=DOID:305!2.97e-19!106;DOID:1749!1.42e-13!14;DOID:0050687!6.13e-12!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.50e-16;14!DOID:299;9.37e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.50e-16,14;DOID:305,3.51e-14,106;DOID:0050687,2.66e-09,143;DOID:299,9.40e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.18e-29!169;UBERON:0000925!1.18e-29!169;UBERON:0006595!1.18e-29!169;UBERON:0001007!4.36e-23!155;UBERON:0001555!4.36e-23!155;UBERON:0007026!4.36e-23!155;UBERON:0004921!7.18e-21!129;UBERON:0004185!7.18e-21!129;UBERON:0000077!3.85e-19!130;UBERON:0001004!5.08e-19!72;UBERON:0001041!2.80e-13!98;UBERON:0000065!3.74e-13!53;UBERON:0005911!2.53e-12!82;UBERON:0000161!3.46e-12!35;UBERON:0000464!1.29e-11!104;UBERON:0005153!1.52e-11!37;UBERON:0000466!2.98e-11!126;UBERON:0000062!4.27e-11!511;UBERON:0005178!4.79e-10!34;UBERON:0002224!4.79e-10!34;UBERON:0000166!6.97e-10!21;UBERON:0008947!1.30e-09!38;UBERON:0003258!1.30e-09!38;UBERON:0005181!1.53e-09!35;UBERON:0000468!1.98e-09!659;UBERON:0000922!2.96e-09!612;UBERON:0000072!5.39e-09!46;UBERON:0005157!1.45e-08!51;UBERON:0000064!3.75e-08!219;UBERON:0000915!7.72e-08!52;UBERON:0002048!7.83e-08!22;UBERON:0000117!7.83e-08!22;UBERON:0000171!7.83e-08!22;UBERON:0000170!7.83e-08!22;UBERON:0005597!7.83e-08!22;UBERON:0000118!7.83e-08!22;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.37e-07!626;UBERON:0002050!2.02e-07!605;UBERON:0005423!2.02e-07!605;UBERON:0000481!2.18e-07!347;UBERON:0005156!2.62e-07!59;UBERON:0000990!2.62e-07!59;UBERON:0000344!2.65e-07!12;UBERON:0000165!3.71e-07!28;UBERON:0000930!3.71e-07!28;UBERON:0000923!3.89e-07!604;UBERON:0005291!3.89e-07!604;UBERON:0006598!3.89e-07!604;UBERON:0002532!3.89e-07!604;UBERON:0004807!4.63e-07!28;UBERON:0003104!6.02e-07!238;UBERON:0009142!6.02e-07!238 | |ontology_enrichment_uberon=UBERON:0004119!1.18e-29!169;UBERON:0000925!1.18e-29!169;UBERON:0006595!1.18e-29!169;UBERON:0001007!4.36e-23!155;UBERON:0001555!4.36e-23!155;UBERON:0007026!4.36e-23!155;UBERON:0004921!7.18e-21!129;UBERON:0004185!7.18e-21!129;UBERON:0000077!3.85e-19!130;UBERON:0001004!5.08e-19!72;UBERON:0001041!2.80e-13!98;UBERON:0000065!3.74e-13!53;UBERON:0005911!2.53e-12!82;UBERON:0000161!3.46e-12!35;UBERON:0000464!1.29e-11!104;UBERON:0005153!1.52e-11!37;UBERON:0000466!2.98e-11!126;UBERON:0000062!4.27e-11!511;UBERON:0005178!4.79e-10!34;UBERON:0002224!4.79e-10!34;UBERON:0000166!6.97e-10!21;UBERON:0008947!1.30e-09!38;UBERON:0003258!1.30e-09!38;UBERON:0005181!1.53e-09!35;UBERON:0000468!1.98e-09!659;UBERON:0000922!2.96e-09!612;UBERON:0000072!5.39e-09!46;UBERON:0005157!1.45e-08!51;UBERON:0000064!3.75e-08!219;UBERON:0000915!7.72e-08!52;UBERON:0002048!7.83e-08!22;UBERON:0000117!7.83e-08!22;UBERON:0000171!7.83e-08!22;UBERON:0000170!7.83e-08!22;UBERON:0005597!7.83e-08!22;UBERON:0000118!7.83e-08!22;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.37e-07!626;UBERON:0002050!2.02e-07!605;UBERON:0005423!2.02e-07!605;UBERON:0000481!2.18e-07!347;UBERON:0005156!2.62e-07!59;UBERON:0000990!2.62e-07!59;UBERON:0000344!2.65e-07!12;UBERON:0000165!3.71e-07!28;UBERON:0000930!3.71e-07!28;UBERON:0000923!3.89e-07!604;UBERON:0005291!3.89e-07!604;UBERON:0006598!3.89e-07!604;UBERON:0002532!3.89e-07!604;UBERON:0004807!4.63e-07!28;UBERON:0003104!6.02e-07!238;UBERON:0009142!6.02e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;9.50e-15;33!UBERON:0001555;2.57e-10;54!UBERON:0001041;3.00e-10;14!UBERON:0000161;3.75e-10;19!UBERON:0000166;3.75e-10;19!UBERON:0005409;3.48e-09;22!UBERON:0000165;6.94e-09;28!UBERON:0005178;5.48e-08;34!UBERON:0002224;5.48e-08;34!UBERON:0000344;9.47e-08;20!UBERON:0000974;1.47e-07;6!UBERON:0005181;4.17e-07;35!UBERON:0005911;4.41e-07;36!UBERON:0001044;6.39e-07;6!UBERON:0003293;6.39e-07;6!UBERON:0003294;6.39e-07;6!UBERON:0010047;6.39e-07;6!UBERON:0003408;6.39e-07;6!UBERON:0000167;6.39e-07;6!UBERON:0000365;6.66e-07;5!UBERON:0000160;7.65e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.10e-26,160;UBERON:0000925,1.10e-26,160;UBERON:0006595,1.10e-26,160;UBERON:0001007,6.84e-20,145;UBERON:0001555,6.84e-20,145;UBERON:0007026,6.84e-20,145;UBERON:0004921,3.60e-18,118;UBERON:0001004,2.71e-15,74;UBERON:0000161,2.68e-13,36;UBERON:0000166,4.66e-11,22;UBERON:0001041,4.35e-10,87;UBERON:0005153,1.03e-09,37;UBERON:0005911,3.37e-09,82;UBERON:0000065,4.34e-09,54;UBERON:0005178,7.33e-09,34;UBERON:0002224,7.33e-09,34;UBERON:0005181,1.93e-08,35;UBERON:0000165,2.13e-08,29;UBERON:0000930,2.13e-08,29;UBERON:0005157,2.84e-08,47;UBERON:0003102,3.84e-08,99;UBERON:0005156,8.45e-08,59;UBERON:0000990,8.45e-08,59;UBERON:0000344,9.57e-08,20;UBERON:0000915,1.29e-07,52;UBERON:0005409,1.33e-07,25;UBERON:0000153,1.54e-07,62;UBERON:0007811,1.54e-07,62;UBERON:0004175,5.32e-07,25;UBERON:0001044,6.46e-07,6;UBERON:0003293,6.46e-07,6;UBERON:0003294,6.46e-07,6;UBERON:0010047,6.46e-07,6;UBERON:0000167,6.46e-07,6;UBERON:0000365,6.66e-07,5;UBERON:0001008,6.95e-07,48;UBERON:0000160,7.70e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,3.44027511102112,43.2636724142905,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,3.56077083626975,343.863537955119,188.253699236406,336.845903261944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44859552370032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,20.2362671643966,832.414733748459,713.389267917242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,0,0,972.489736277852,0,0,0,0,0,1.68203280042692,0,0,0,0,0,0,0,0,0,2.85235910772225,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,457.448439437524,252.562907667113,395.790341636825,1.46368447355514,1.06023814657188,1.74290914304278,2.28054321033815,5.04641701751257,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.330881918197182,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,171.691860206187,0,440.537645630223,204.571190928868,161.952174555137,301.375388991014,0,0,0,0,0,0,0,0,536.548786214348,515.950183419018,0,0,0,639.264747789819,194.691286582478,256.61292600872,257.480752770689,317.372260857246,332.009400157073,0,0,1.86595303986695,2.16179930125442,2.65109110195398,0.825472625798197,0,0,18.8179690624976,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,83.3930202182193,363.518230659855,589.68665314548,0,0,0.262248829918848,4.06079651616671,1.00119938235739,0.784349769176855,0,0.949964660035881,0,0,0.863663664408557,0,0,0,1.27438136522519,2.49322802678617,0,0,0,0,0,0,41.5255276940321,0,0,118.872966365208,345.181990645393,0,0,0,0,0,0,0,0.255679882248303,0,445.938701643919,211.793454236347,69.5489283095483,339.687828112937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,216.692197857853,343.865067349859,203.626141690673,36.6219385021671,266.05232031082,803.608938934574,1026.09737528387,240.9798468171,0,0,0,0,0,0,0,0,0,0,562.367295676468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,612.88526983692,0,0,0,0,391.540954969812,127.100883396369,169.552707558776,0,0,0,0,14.1454023445756,53.7969568277888,90.6211242942164,565.085153437141,0,0,0,13.0309109163624,128.716224591763,0,63.0331362020006,0,0,0,0,0,151.568956951606,324.126759985901,38.4249774980441,583.987976601184,65.0889344749482,159.561685193357,0,0,0,0,0,0,0,0,0,0,1025.87991040196,92.6481112385717,0,10.8365035062388,30.7868720325518,44.3281277441793,222.024807173416,10.9917112082235,156.17918937346,0,0,0,0,0,0,0,0,0,0,19.082664643582,0,918.62676238546,110.129667806657,1960.18470494707,0,0,0,0.134802265961354,0,0,0,578.384613563257,0,5.91876604274086,124.620437530124,0,0,0,0,0,0,0,0,0.569219092059585,0,57.6218331272635,507.208649016819,181.170208893818,7.16379339792324,0,1.06431964417994,0.730893170861856,0.985385484638511,235.489332033882,0,62.1447037146464,0,0,0,647.079525469463,4.48889393408589,178.01979761262,17.5832456432275,290.630371399832,0,0,0,0,350.005641405941,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,146.764065366758,0,0,0.268733889946905,0,1.16495949527454,0.236349546921671,0,0.471824806979294,0,0,0,0,0.321506296930038,0.137539436597234,0,1.349843349309,19.3450488639487,0.242998226632099,1518.51283076188,5.12237097444788,10.1761900981896,0,0,215.136936195098,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0.342173675768659,265.715263413385,95.6815216606544,71.6851631254477,135.456171098533,0,0,0,308.318827502998,0,0,0,0,53.3983927250797,0,0,0,0,0.221858103073705,0.558867626472451,0,2.87454938312845,10.767087345457,0,0,0,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,28.9497609001319,0,0,0,0,0,638.410073231545,341.520415758102,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,273.832134617861,716.548099614175,1406.71392206276,113.215152827331,0,0,0,3.68530608911361,0,75.80685908961,21.2144422529952,0,33.7111876574863,0,0,0,0,0,450.119626589747,51.1097513740973,0,423.276922769979,0,0,19.4228993355722,9.3341498454032,112.474605366226,0,0,0,0.0657727735628491,0,48.0519656173739,129.199630831946,0,32.5115709443995,224.637045245336,0,0,4.78892845983597,0.316027223465453,0,0,0,23.6226427145862,15.8768183697373,92.6287946830883,488.308052261015,0,0,8.04435395362765,78.5836559106092,0,0,21.8118092005695,57.9086378329933,47.3041548931205,0,0,0,75.7709149172258,276.984324739133,35.2142872035622,0,4.17900503544152,0.109940516745429,0.452888530700021,51.7838600904309,106.657065525931,681.019445131485,17.4055308445273,13.9049162789959,0,0,2.113278637917,0,0,0,0,634.402143865902,157.038217913483,31.53485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| ||
|short_description=p1@FXYD3 | |short_description=p1@FXYD3 | ||
}} | }} |
Latest revision as of 09:56, 17 September 2015
Short description: | p1@FXYD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FXYD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000406988_5end |
EntrezGene: | FXYD3 |
HGNC: | 4027 |
UniProt: | Q14802 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.74e-27 | 42 |
epithelial cell | 7.54e-24 | 253 |
endodermal cell | 1.67e-20 | 58 |
epithelial cell of alimentary canal | 4.66e-16 | 20 |
respiratory epithelial cell | 1.43e-11 | 13 |
general ecto-epithelial cell | 3.59e-09 | 14 |
epithelial cell of tracheobronchial tree | 1.03e-07 | 9 |
epithelial cell of lower respiratory tract | 1.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.10e-26 | 160 |
endoderm | 1.10e-26 | 160 |
presumptive endoderm | 1.10e-26 | 160 |
digestive system | 6.84e-20 | 145 |
digestive tract | 6.84e-20 | 145 |
primitive gut | 6.84e-20 | 145 |
subdivision of digestive tract | 3.60e-18 | 118 |
respiratory system | 2.71e-15 | 74 |
orifice | 2.68e-13 | 36 |
oral opening | 4.66e-11 | 22 |
foregut | 4.35e-10 | 87 |
epithelial bud | 1.03e-09 | 37 |
endo-epithelium | 3.37e-09 | 82 |
respiratory tract | 4.34e-09 | 54 |
thoracic cavity element | 7.33e-09 | 34 |
thoracic cavity | 7.33e-09 | 34 |
thoracic segment organ | 1.93e-08 | 35 |
mouth | 2.13e-08 | 29 |
stomodeum | 2.13e-08 | 29 |
epithelial fold | 2.84e-08 | 47 |
surface structure | 3.84e-08 | 99 |
reproductive structure | 8.45e-08 | 59 |
reproductive system | 8.45e-08 | 59 |
mucosa | 9.57e-08 | 20 |
thoracic segment of trunk | 1.29e-07 | 52 |
gastrointestinal system | 1.33e-07 | 25 |
anterior region of body | 1.54e-07 | 62 |
craniocervical region | 1.54e-07 | 62 |
internal genitalia | 5.32e-07 | 25 |
saliva-secreting gland | 6.46e-07 | 6 |
gland of oral region | 6.46e-07 | 6 |
gland of foregut | 6.46e-07 | 6 |
oral gland | 6.46e-07 | 6 |
oral cavity | 6.46e-07 | 6 |
urothelium | 6.66e-07 | 5 |
renal system | 6.95e-07 | 48 |
intestine | 7.70e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.50e-16 | 14 |
carcinoma | 3.51e-14 | 106 |
cell type cancer | 2.66e-09 | 143 |
adenocarcinoma | 9.40e-07 | 25 |