FFCP PHASE1:Hg19::chr12:13251426..13251431,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:13251426..13251431,+
|short_description=p@chr12:13251426..13251431,+
|description=CAGE_peak_at_chr12:13251426..13251431,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:13251426..13251431,+ | |||
|coexpression_cluster_id=C3259 | |||
|description=CAGE_peak_at_chr12:13251426..13251431,+ | |||
|id=chr12:13251426..13251431,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.35e-26!42;CL:0000860!3.12e-25!45;CL:0002009!3.79e-20!65;CL:0002194!3.74e-19!63;CL:0000576!3.74e-19!63;CL:0000040!3.74e-19!63;CL:0000559!3.74e-19!63;CL:0000766!1.21e-18!76;CL:0000557!5.91e-18!71;CL:0000839!3.56e-17!70;CL:0000763!5.87e-16!112;CL:0000049!5.87e-16!112;CL:0002087!2.19e-13!119;CL:0000738!3.46e-13!140;CL:0000037!9.28e-13!172;CL:0000566!9.28e-13!172;CL:0002031!1.12e-12!124;CL:0002032!1.59e-12!165;CL:0000837!1.59e-12!165;CL:0000988!7.71e-12!182;CL:0002393!1.02e-07!9;CL:0002397!1.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.39e-61;33!CL:0002057;4.39e-61;33!CL:0000473;3.59e-49;39!CL:0000234;3.59e-49;39!CL:0000576;7.98e-46;48!CL:0000766;2.79e-34;69!CL:0002393;3.48e-17;6!CL:0002397;3.48e-17;6!CL:0000763;8.02e-15;100!CL:0002087;1.07e-11;104!CL:0000767;5.59e-10;3!CL:0000875;1.09e-08;3!CL:0002396;1.09e-08;3!CL:0000738;7.02e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.80e-90,42;CL:0002057,8.80e-90,42;CL:0000473,1.72e-85,48;CL:0000234,1.72e-85,48;CL:0002194,3.86e-66,59;CL:0000576,3.86e-66,59;CL:0000040,3.86e-66,59;CL:0000559,3.86e-66,59;CL:0000766,1.55e-65,72;CL:0002009,1.21e-63,61;CL:0000839,4.67e-58,66;CL:0000557,4.88e-57,67;CL:0000763,3.45e-46,108;CL:0000049,3.45e-46,108;CL:0000738,2.82e-34,136;CL:0002087,3.83e-34,115;CL:0002031,1.88e-30,120;CL:0002032,7.52e-30,161;CL:0000837,7.52e-30,161;CL:0000037,1.36e-29,168;CL:0000988,1.91e-27,177;CL:0002393,3.54e-24,9;CL:0002397,3.54e-24,9;CL:0000767,5.31e-10,3;CL:0000134,1.67e-09,354;CL:0000219,2.46e-09,386;CL:0002320,4.42e-09,361;CL:0000875,9.53e-09,3;CL:0002396,9.53e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.63e-64;42!CL:0000049;1.21e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.20e-15!80;UBERON:0001474!8.20e-14!86;UBERON:0004765!5.72e-13!101;UBERON:0001434!5.72e-13!101;UBERON:0002390!1.05e-12!102;UBERON:0003061!1.05e-12!102;UBERON:0002193!8.73e-11!112;UBERON:0002405!2.76e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.58e-49,76;UBERON:0001474,1.03e-44,82;UBERON:0004765,8.28e-40,90;UBERON:0002405,3.47e-38,93;UBERON:0002390,7.78e-38,98;UBERON:0003061,7.78e-38,98;UBERON:0001434,8.40e-37,100;UBERON:0002193,2.46e-33,108;UBERON:0002204,9.35e-18,167;UBERON:0003081,9.97e-14,203;UBERON:0002384,4.29e-09,371 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0.273748850145768,0,0,0,0,4.32700704533794,3.45446458287491,6.34746105595912,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,2.21598163412751,2.20598892217156,3.68918480216948,0.223915474239924,0,0.77272670290256,0.581592955118259,1.51150377475524,1.21292030593908,2.09186133215116,4.52284676824008,3.40677007984614,5.75384784644301,1.2808035326455,6.14853797710322,6.20542225325913,5.80936215225443,4.06279459783025,1.88242339542605,0.818718450173537,2.69668181334102,3.36692281607993,2.88836124368484,3.19668562899521,0,1.99463657621632,2.13112375266347,1.45104619314292,0,1.24564449799115,9.2962006144995,5.73631210262222,10.4250645458456,1.21079900526674,1.84138817993782,5.37986058649504,2.32380814943136,2.33864729961548,3.14487968262564,2.2465726229299,2.70318407114711,1.6072558669708,2.56511469367124,1.19350006319454,1.64397738388171,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,1.31692042387539,0.393419540227666,0,1.02800749499755,0,0,0,1.94826728407911,0,0,0.221533894583621,0.541607727530031,0.384273959177026,0.390178042679635,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,1.01207876807801,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,7.75560528296651,0,0.993943903390637,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.612975591598039,0,0,0.538168907066586,0,0.211931901159562,0,0.206105058476878,0,0,0,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0.468008530278475,0.148631162288728,0.93733833986777,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0.288239906833923,0.37872730027914,0,0,1.17217447210047,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.560425719967636,0.394061520403854,0.646882724578552,1.28343036279748,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,2.15714200818617,0.426910231213777,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0.322260734604821,0,0.255679882248303,0.178064071293475,0,0,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.427296284509893,3.84991942105343,0.245040215981032,0,0,0,0.159426272728822,1.1974762285969,0,0.635020748171649,0,0.280797178113459,0.684704037099577,0.626719583092093,0,0.846458889008016,1.1241165257259,0.201799707191048,0.425846237690326,0,0,0,0.667396566847634,1.56310476321632,0,0,0.270455678475983,0,0,0,0.146508179271894,0.242721043499027,0.111443384277478,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.333926115068718,0.329607748453519,12.4563990795516,0,0.276283915531148,0.503865495708552,0.102268682502155,0.246169610922139,0,0.539210106883961,0,0,0,0,0,0,0.185536196323703,1.99613798001194,1.30213880542617,0.174919999992391,0,0,0,0,1.72371686620732,0.874813840149763,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0.435753854075961,0,0.0769502585037971,0.227884111694002,0.23056390438806,0.448788222048861,0,0.31900115973192,0.0915975934018623,0,0,0.1569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|phase1_expression=0.54503513781167,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0,0.273748850145768,0,0,0,0,4.32700704533794,3.45446458287491,6.34746105595912,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,2.21598163412751,2.20598892217156,3.68918480216948,0.223915474239924,0,0.77272670290256,0.581592955118259,1.51150377475524,1.21292030593908,2.09186133215116,4.52284676824008,3.40677007984614,5.75384784644301,1.2808035326455,6.14853797710322,6.20542225325913,5.80936215225443,4.06279459783025,1.88242339542605,0.818718450173537,2.69668181334102,3.36692281607993,2.88836124368484,3.19668562899521,0,1.99463657621632,2.13112375266347,1.45104619314292,0,1.24564449799115,9.2962006144995,5.73631210262222,10.4250645458456,1.21079900526674,1.84138817993782,5.37986058649504,2.32380814943136,2.33864729961548,3.14487968262564,2.2465726229299,2.70318407114711,1.6072558669708,2.56511469367124,1.19350006319454,1.64397738388171,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,1.31692042387539,0.393419540227666,0,1.02800749499755,0,0,0,1.94826728407911,0,0,0.221533894583621,0.541607727530031,0.384273959177026,0.390178042679635,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,1.01207876807801,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,7.75560528296651,0,0.993943903390637,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.612975591598039,0,0,0.538168907066586,0,0.211931901159562,0,0.206105058476878,0,0,0,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0.468008530278475,0.148631162288728,0.93733833986777,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0.288239906833923,0.37872730027914,0,0,1.17217447210047,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.560425719967636,0.394061520403854,0.646882724578552,1.28343036279748,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,2.15714200818617,0.426910231213777,0,0,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0.322260734604821,0,0.255679882248303,0.178064071293475,0,0,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.427296284509893,3.84991942105343,0.245040215981032,0,0,0,0.159426272728822,1.1974762285969,0,0.635020748171649,0,0.280797178113459,0.684704037099577,0.626719583092093,0,0.846458889008016,1.1241165257259,0.201799707191048,0.425846237690326,0,0,0,0.667396566847634,1.56310476321632,0,0,0.270455678475983,0,0,0,0.146508179271894,0.242721043499027,0.111443384277478,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.333926115068718,0.329607748453519,12.4563990795516,0,0.276283915531148,0.503865495708552,0.102268682502155,0.246169610922139,0,0.539210106883961,0,0,0,0,0,0,0.185536196323703,1.99613798001194,1.30213880542617,0.174919999992391,0,0,0,0,1.72371686620732,0.874813840149763,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0.435753854075961,0,0.0769502585037971,0.227884111694002,0.23056390438806,0.448788222048861,0,0.31900115973192,0.0915975934018623,0,0,0.1569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| ||
|short_description=p@chr12:13251426..13251431,+ | |||
}} | }} |
Latest revision as of 06:50, 24 July 2015
Short description: | p@chr12:13251426..13251431, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13251426..13251431, + |
Coexpression cluster: | C3259_Eosinophils_CD14_Basophils_anaplastic_optic_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.80e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.80e-90 | 42 |
defensive cell | 1.72e-85 | 48 |
phagocyte | 1.72e-85 | 48 |
monopoietic cell | 3.86e-66 | 59 |
monocyte | 3.86e-66 | 59 |
monoblast | 3.86e-66 | 59 |
promonocyte | 3.86e-66 | 59 |
myeloid leukocyte | 1.55e-65 | 72 |
macrophage dendritic cell progenitor | 1.21e-63 | 61 |
myeloid lineage restricted progenitor cell | 4.67e-58 | 66 |
granulocyte monocyte progenitor cell | 4.88e-57 | 67 |
myeloid cell | 3.45e-46 | 108 |
common myeloid progenitor | 3.45e-46 | 108 |
leukocyte | 2.82e-34 | 136 |
nongranular leukocyte | 3.83e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 1.88e-30 | 120 |
hematopoietic oligopotent progenitor cell | 7.52e-30 | 161 |
hematopoietic multipotent progenitor cell | 7.52e-30 | 161 |
hematopoietic stem cell | 1.36e-29 | 168 |
hematopoietic cell | 1.91e-27 | 177 |
intermediate monocyte | 3.54e-24 | 9 |
CD14-positive, CD16-positive monocyte | 3.54e-24 | 9 |
basophil | 5.31e-10 | 3 |
mesenchymal cell | 1.67e-09 | 354 |
motile cell | 2.46e-09 | 386 |
connective tissue cell | 4.42e-09 | 361 |
non-classical monocyte | 9.53e-09 | 3 |
CD14-low, CD16-positive monocyte | 9.53e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.58e-49 | 76 |
bone element | 1.03e-44 | 82 |
skeletal element | 8.28e-40 | 90 |
immune system | 3.47e-38 | 93 |
hematopoietic system | 7.78e-38 | 98 |
blood island | 7.78e-38 | 98 |
skeletal system | 8.40e-37 | 100 |
hemolymphoid system | 2.46e-33 | 108 |
musculoskeletal system | 9.35e-18 | 167 |
lateral plate mesoderm | 9.97e-14 | 203 |
connective tissue | 4.29e-09 | 371 |