FFCP PHASE1:Hg19::chr3:127842612..127842680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8607 | |EntrezGene=8607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10474 | |HGNC=10474 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y265 | |UniProt=Q9Y265 | ||
|association_with_transcript=0bp_to_ENST00000322623,ENST00000417360,NM_003707,uc003ekh.2,uc010hss.2_5end | |association_with_transcript=0bp_to_ENST00000322623,ENST00000417360,NM_003707,uc003ekh.2,uc010hss.2_5end | ||
|cluster_id=chr3:127842612..127842680,- | |||
|description=CAGE_peak_1_at_RUVBL1_5end | |description=CAGE_peak_1_at_RUVBL1_5end | ||
|id=chr3:127842612..127842680,- | |id=chr3:127842612..127842680,- | ||
|ontology_enrichment_celltype=CL:0000066!9.45e-25!254;CL:0000548!1.04e-23!679;CL:0000004!1.04e-23!679;CL:0000255!1.04e-23!679;CL:0000012!4.01e-23!682;CL:0002321!3.13e-19!248;CL:0000220!8.44e-19!246;CL:0000003!1.75e-15!722;CL:0000076!4.42e-12!62;CL:0000055!6.27e-10!180;CL:0000144!6.01e-09!625;CL:0000221!1.21e-07!71;CL:0000222!2.20e-07!119;CL:0000063!5.77e-07!578 | |ontology_enrichment_celltype=CL:0000066!9.45e-25!254;CL:0000548!1.04e-23!679;CL:0000004!1.04e-23!679;CL:0000255!1.04e-23!679;CL:0000012!4.01e-23!682;CL:0002321!3.13e-19!248;CL:0000220!8.44e-19!246;CL:0000003!1.75e-15!722;CL:0000076!4.42e-12!62;CL:0000055!6.27e-10!180;CL:0000144!6.01e-09!625;CL:0000221!1.21e-07!71;CL:0000222!2.20e-07!119;CL:0000063!5.77e-07!578 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.83e-25,253;CL:0002321,1.99e-19,250;CL:0000076,8.88e-12,63;CL:0000222,1.62e-07,121;CL:0000221,1.84e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.34e-38!239;DOID:162!6.34e-38!235;DOID:0050687!3.72e-20!143;DOID:305!2.64e-17!106;DOID:0050686!2.88e-17!137;DOID:2531!2.93e-12!51;DOID:0060083!2.93e-12!51;DOID:1240!7.81e-09!39;DOID:8692!6.16e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.07e-08;51!DOID:0060083;8.07e-08;51!DOID:1240;2.11e-07;39!DOID:8692;9.98e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.34e-38,239;DOID:162,6.34e-38,235;DOID:0050687,3.72e-20,143;DOID:305,2.64e-17,106;DOID:0050686,2.88e-17,137;DOID:2531,2.93e-12,51;DOID:0060083,2.93e-12,51;DOID:1240,7.81e-09,39;DOID:8692,6.16e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.50e-09!238;UBERON:0009142!3.50e-09!238;UBERON:0000072!7.25e-08!46;UBERON:0008947!1.00e-07!38;UBERON:0003258!1.00e-07!38;UBERON:0001048!2.95e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.26e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,9.10e-08,47;UBERON:0008947,1.00e-07,38;UBERON:0003258,1.00e-07,38;UBERON:0002100,3.71e-07,199 | |||
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| ||
|short_description=p1@RUVBL1 | |short_description=p1@RUVBL1 | ||
}} | }} |
Latest revision as of 06:32, 20 September 2015
Short description: | p1@RUVBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RUVBL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000322623, ENST00000417360, NM_003707, uc003ekh.2, uc010hss.2_5end |
EntrezGene: | RUVBL1 |
HGNC: | 10474 |
UniProt: | Q9Y265 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.83e-25 | 253 |
embryonic cell | 1.99e-19 | 250 |
squamous epithelial cell | 8.88e-12 | 63 |
mesodermal cell | 1.62e-07 | 121 |
ectodermal cell | 1.84e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 9.10e-08 | 47 |
respiratory primordium | 1.00e-07 | 38 |
endoderm of foregut | 1.00e-07 | 38 |
trunk | 3.71e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.34e-38 | 239 |
cancer | 6.34e-38 | 235 |
cell type cancer | 3.72e-20 | 143 |
carcinoma | 2.64e-17 | 106 |
organ system cancer | 2.88e-17 | 137 |
hematologic cancer | 2.93e-12 | 51 |
immune system cancer | 2.93e-12 | 51 |
leukemia | 7.81e-09 | 39 |
myeloid leukemia | 6.16e-07 | 31 |