FFCP PHASE1:Hg19::chr19:51893782..51893824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010ycx.1_5end | |association_with_transcript=0bp_to_uc010ycx.1_5end | ||
|cluster_id=chr19:51893782..51893824,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_uc010ycx.1_5end | |description=CAGE_peak_1_at_uc010ycx.1_5end | ||
|id=chr19:51893782..51893824,- | |id=chr19:51893782..51893824,- | ||
|ontology_enrichment_celltype=CL:0002322!7.02e-12!5 | |ontology_enrichment_celltype=CL:0002322!7.02e-12!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.14e-45;5!CL:0000039;5.57e-21;7!CL:0000586;5.57e-21;7!CL:0002321;3.26e-15;15!CL:0000540;5.90e-14;6!CL:0000404;5.90e-14;6!CL:0000148;6.58e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.20e-45,5;CL:0000039,5.16e-21,7;CL:0000586,5.16e-21,7;CL:0000540,7.06e-14,6;CL:0000031,7.06e-14,6;CL:0000404,7.06e-14,6;CL:0000047,1.50e-10,8;CL:0000148,7.43e-09,10;CL:0000541,7.43e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.12e-32;10!UBERON:0005564;1.12e-32;10!CL:0000031;5.90e-14;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;6.07e-11;8!DOID:3095;8.36e-07;22!DOID:2994;8.36e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.49e-11,8;DOID:3095,8.17e-07,22;DOID:2994,8.17e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.26e-10!8;UBERON:0003135!2.72e-09!11;UBERON:0007023!2.99e-07!115;UBERON:0000991!9.35e-07!21;UBERON:0009196!9.35e-07!21;UBERON:0009117!9.35e-07!21;UBERON:0005564!9.35e-07!21 | |ontology_enrichment_uberon=UBERON:0000473!3.26e-10!8;UBERON:0003135!2.72e-09!11;UBERON:0007023!2.99e-07!115;UBERON:0000991!9.35e-07!21;UBERON:0009196!9.35e-07!21;UBERON:0009117!9.35e-07!21;UBERON:0005564!9.35e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.53e-41;8!UBERON:0003135;1.12e-29;11!UBERON:0000991;2.26e-15;21!UBERON:0003101;1.18e-14;22!UBERON:0000079;1.18e-14;22!UBERON:0000922;1.41e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.89e-41,8;UBERON:0003135,1.04e-29,11;UBERON:0000991,2.17e-15,21;UBERON:0009196,2.17e-15,21;UBERON:0009117,2.17e-15,21;UBERON:0005564,2.17e-15,21;UBERON:0004176,1.14e-14,22;UBERON:0003101,1.14e-14,22;UBERON:0000079,1.14e-14,22;UBERON:0002323,8.96e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0.515151135268373,0,0,0.727752183563449,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,7.33482822787191,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,3.78118489001746,2.51806559810822,3.02104251460748,3.21349270547648,4.03713361401005,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38393490925771,3.33306308340157,3.69207491346854,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0,0.795229689809303,0,1.44677833618517,2.06309154895851,2.07720169014593,0.2249738915515,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74847648403166,0,0,0,0,0.594092800654172,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0.252332849670158,0,0,1.63182127587171,4.80991329478009,3.12442658418473,2.75778293221613,18.7931171581234,27.8682695362426,0,0,0,0,0.322944549180031,0.248298857183432,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0.515151135268373,0,0,0.727752183563449,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,7.33482822787191,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,3.78118489001746,2.51806559810822,3.02104251460748,3.21349270547648,4.03713361401005,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38393490925771,3.33306308340157,3.69207491346854,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0,0.795229689809303,0,1.44677833618517,2.06309154895851,2.07720169014593,0.2249738915515,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74847648403166,0,0,0,0,0.594092800654172,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0.252332849670158,0,0,1.63182127587171,4.80991329478009,3.12442658418473,2.75778293221613,18.7931171581234,27.8682695362426,0,0,0,0,0.322944549180031,0.248298857183432,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@uc010ycx.1 | |short_description=p1@uc010ycx.1 | ||
}} | }} |
Latest revision as of 16:41, 27 July 2015
Short description: | p1@uc010ycx.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc010ycx.1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc010ycx.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.20e-45 | 5 |
germ line cell | 5.16e-21 | 7 |
germ cell | 5.16e-21 | 7 |
neuron | 7.06e-14 | 6 |
neuroblast | 7.06e-14 | 6 |
electrically signaling cell | 7.06e-14 | 6 |
neuronal stem cell | 1.50e-10 | 8 |
melanocyte | 7.43e-09 | 10 |
melanoblast | 7.43e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 5.89e-41 | 8 |
male reproductive organ | 1.04e-29 | 11 |
gonad | 2.17e-15 | 21 |
indifferent external genitalia | 2.17e-15 | 21 |
indifferent gonad | 2.17e-15 | 21 |
gonad primordium | 2.17e-15 | 21 |
external genitalia | 1.14e-14 | 22 |
male organism | 1.14e-14 | 22 |
male reproductive system | 1.14e-14 | 22 |
body cavity | 8.96e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.49e-11 | 8 |
germ cell and embryonal cancer | 8.17e-07 | 22 |
germ cell cancer | 8.17e-07 | 22 |