FFCP PHASE1:Hg19::chr19:54062481..54062494,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54062481..54062494,+ | |||
|coexpression_cluster_id=C437 | |||
|description=CAGE_peak_at_chr19:54062481..54062494,+ | |description=CAGE_peak_at_chr19:54062481..54062494,+ | ||
|id=chr19:54062481..54062494,+ | |id=chr19:54062481..54062494,+ | ||
|ontology_enrichment_celltype=CL:0000624!2.70e-09!6;CL:0002087!4.08e-08!119;CL:0000738!1.99e-07!140;CL:0002031!2.98e-07!124 | |ontology_enrichment_celltype=CL:0000624!2.70e-09!6;CL:0002087!4.08e-08!119;CL:0000738!1.99e-07!140;CL:0002031!2.98e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000623;7.14e-22;3!CL:0000791;6.75e-14;18!CL:0000789;6.75e-14;18!CL:0002419;6.75e-14;18!CL:0000624;1.48e-11;6!CL:0000226;3.34e-10;3!CL:0000842;3.34e-10;3!CL:0000542;4.04e-10;53!CL:0000084;7.48e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,8.23e-22,3;CL:0000825,8.23e-22,3;CL:0002087,5.60e-18,115;CL:0000838,1.94e-17,52;CL:0000542,4.57e-17,53;CL:0000051,4.57e-17,53;CL:0000738,1.87e-16,136;CL:0002031,4.22e-15,120;CL:0000791,7.15e-14,18;CL:0000789,7.15e-14,18;CL:0002420,7.15e-14,18;CL:0002419,7.15e-14,18;CL:0000790,7.15e-14,18;CL:0000037,1.33e-12,168;CL:0000988,9.11e-12,177;CL:0000624,1.41e-11,6;CL:0002032,2.19e-10,161;CL:0000837,2.19e-10,161;CL:0000226,2.71e-10,3;CL:0000842,2.71e-10,3;CL:0000084,7.78e-10,25;CL:0000827,7.78e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000790;6.75e-14;18!CL:0000051;4.04e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.44e-10!115;UBERON:0001049!7.21e-08!57;UBERON:0005068!7.21e-08!57;UBERON:0006241!7.21e-08!57;UBERON:0007135!7.21e-08!57 | |ontology_enrichment_uberon=UBERON:0007023!4.44e-10!115;UBERON:0001049!7.21e-08!57;UBERON:0005068!7.21e-08!57;UBERON:0006241!7.21e-08!57;UBERON:0007135!7.21e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;8.53e-08;4!UBERON:0010133;8.53e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,9.78e-08,4;UBERON:0010133,9.78e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,1.20326668482085,1.08505435357926,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0.464858073811369,1.6446715520873,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,1.25624332628372,1.5644487552606,0,0,0,0,0,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,2.84606484554724,2.34894875748376,3.44045905312706,1.32171328579026,0,0,5.90129310341499,7.8602152549833,6.16804496998528,0,0.651844533267181,0,0,0,0.589211814949674,0.221533894583621,0.812411591295047,0.128091319725675,0.130059347559878,0,0.276350017785848,0,1.92772532110679,0,4.18142095219907,0.113309342697566,0.383220493601921,0,1.51811815211702,0,0,0,0,0,0,0,0,2.21767417547206,2.13952156626806,5.50332734754636,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0,1.65862492432618,0.432359860250884,0.50496973370552,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,2.1673383622212,2.37190332345469,5.26206448746968,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,0.647142602455851,1.81436848265855,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0,0,0.663475559587348,0.295547618953547,0,0.21787692703798,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0.176512253383001,0,0,0,0.316553979779393,0.391102765469606,0.0801588202515337,0.426905989478705,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.332787154610557,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0.467426619694449,0,0.947015026375446,0,0,0,0.302461847526478,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.620060389503552,0.253663240775627,0,0,0,0,0,1.07140367175657,0,2.42786241694653,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.203909198930495,0,0.354581522651905,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0.142953088353313,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.301925687133347,0,0,0.470317296361523,0,0,0.196308467114945,0.594092800654172,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,6.06351566874658,0,0,0,0.0717222053926763,0,0.162806537221949,0.533636729388577,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr19:54062481..54062494,+ | |short_description=p@chr19:54062481..54062494,+ | ||
}} | }} |
Latest revision as of 17:00, 27 July 2015
Short description: | p@chr19:54062481..54062494, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54062481..54062494, + |
Coexpression cluster: | C437_CD4_CD8_Natural_CD19_thyroid_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 8.23e-22 | 3 |
pro-NK cell | 8.23e-22 | 3 |
nongranular leukocyte | 5.60e-18 | 115 |
lymphoid lineage restricted progenitor cell | 1.94e-17 | 52 |
lymphocyte | 4.57e-17 | 53 |
common lymphoid progenitor | 4.57e-17 | 53 |
leukocyte | 1.87e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 4.22e-15 | 120 |
mature alpha-beta T cell | 7.15e-14 | 18 |
alpha-beta T cell | 7.15e-14 | 18 |
immature T cell | 7.15e-14 | 18 |
mature T cell | 7.15e-14 | 18 |
immature alpha-beta T cell | 7.15e-14 | 18 |
hematopoietic stem cell | 1.33e-12 | 168 |
hematopoietic cell | 9.11e-12 | 177 |
CD4-positive, alpha-beta T cell | 1.41e-11 | 6 |
hematopoietic oligopotent progenitor cell | 2.19e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-10 | 161 |
single nucleate cell | 2.71e-10 | 3 |
mononuclear cell | 2.71e-10 | 3 |
T cell | 7.78e-10 | 25 |
pro-T cell | 7.78e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 9.78e-08 | 4 |
neuroendocrine gland | 9.78e-08 | 4 |