FFCP PHASE1:Hg19::chr3:45927994..45928015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10803 | |EntrezGene=10803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1610 | |HGNC=1610 | ||
|TSSclassifier=strong | |||
|UniProt=P51686 | |UniProt=P51686 | ||
|association_with_transcript=0bp_to_ENST00000357632,ENST00000395963,ENST00000463197,NM_006641,NM_031200,NR_036525_5end | |association_with_transcript=0bp_to_ENST00000357632,ENST00000395963,ENST00000463197,NM_006641,NM_031200,NR_036525_5end | ||
|cluster_id=chr3:45927994..45928015,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_2_at_CCR9_5end | |description=CAGE_peak_2_at_CCR9_5end | ||
|id=chr3:45927994..45928015,+ | |id=chr3:45927994..45928015,+ | ||
|ontology_enrichment_celltype=CL:0000791!8.41e-28!18;CL:0000789!8.41e-28!18;CL:0002420!8.41e-28!18;CL:0002419!8.41e-28!18;CL:0000790!8.41e-28!18;CL:0000838!3.88e-24!52;CL:0000542!1.38e-23!53;CL:0000051!1.38e-23!53;CL:0000084!1.60e-22!25;CL:0000827!1.60e-22!25;CL:0000624!2.10e-16!6;CL:0000625!1.44e-15!11;CL:0000738!1.57e-10!140;CL:0002087!9.15e-10!119;CL:0000815!1.72e-08!2;CL:0000792!1.72e-08!2;CL:0002677!1.72e-08!2;CL:0002031!3.33e-08!124;CL:0000037!1.55e-07!172;CL:0000566!1.55e-07!172;CL:0000988!7.95e-07!182 | |ontology_enrichment_celltype=CL:0000791!8.41e-28!18;CL:0000789!8.41e-28!18;CL:0002420!8.41e-28!18;CL:0002419!8.41e-28!18;CL:0000790!8.41e-28!18;CL:0000838!3.88e-24!52;CL:0000542!1.38e-23!53;CL:0000051!1.38e-23!53;CL:0000084!1.60e-22!25;CL:0000827!1.60e-22!25;CL:0000624!2.10e-16!6;CL:0000625!1.44e-15!11;CL:0000738!1.57e-10!140;CL:0002087!9.15e-10!119;CL:0000815!1.72e-08!2;CL:0000792!1.72e-08!2;CL:0002677!1.72e-08!2;CL:0002031!3.33e-08!124;CL:0000037!1.55e-07!172;CL:0000566!1.55e-07!172;CL:0000988!7.95e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.07e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.13e-18,6 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.43e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.30e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.44e-25;2!UBERON:0005058;3.44e-25;2!UBERON:0009113;3.44e-25;2!UBERON:0002108;1.33e-21;4!UBERON:0004177;1.16e-10;5!UBERON:0005057;1.16e-10;5!UBERON:0000160;1.28e-10;17!UBERON:0005409;2.35e-08;22!UBERON:0000341;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.10e-21,4;UBERON:0002370,4.24e-13,4;UBERON:0005058,4.24e-13,4;UBERON:0009113,4.24e-13,4;UBERON:0003295,4.24e-13,4;UBERON:0005562,4.24e-13,4;UBERON:0000974,2.07e-11,10;UBERON:0000160,1.61e-10,17;UBERON:0003351,4.94e-09,6;UBERON:0004177,7.30e-08,7;UBERON:0005057,7.30e-08,7;UBERON:0005409,2.40e-07,25;UBERON:0000341,3.28e-07,2 | |||
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| ||
|short_description=p2@CCR9 | |short_description=p2@CCR9 | ||
}} | }} |
Latest revision as of 09:30, 18 September 2015
Short description: | p2@CCR9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCR9_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000357632, ENST00000395963, ENST00000463197, NM_006641, NM_031200, NR_036525_5end |
EntrezGene: | CCR9 |
HGNC: | 1610 |
UniProt: | P51686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.13e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.10e-21 | 4 |
thymus | 4.24e-13 | 4 |
hemolymphoid system gland | 4.24e-13 | 4 |
thymic region | 4.24e-13 | 4 |
pharyngeal gland | 4.24e-13 | 4 |
thymus primordium | 4.24e-13 | 4 |
neck | 2.07e-11 | 10 |
intestine | 1.61e-10 | 17 |
pharyngeal epithelium | 4.94e-09 | 6 |
hemopoietic organ | 7.30e-08 | 7 |
immune organ | 7.30e-08 | 7 |
gastrointestinal system | 2.40e-07 | 25 |
throat | 3.28e-07 | 2 |