FFCP PHASE1:Hg19::chr1:109203997..109204121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113802 | |EntrezGene=113802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26400 | |HGNC=26400 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T8I9 | |UniProt=Q5T8I9 | ||
|association_with_transcript=26bp_to_ENST00000370032,NM_144584,uc001dvu.3,uc009wer.2_5end | |association_with_transcript=26bp_to_ENST00000370032,NM_144584,uc001dvu.3,uc009wer.2_5end | ||
|cluster_id=chr1:109203997..109204121,- | |||
|description=CAGE_peak_2_at_HENMT1_5end | |description=CAGE_peak_2_at_HENMT1_5end | ||
|id=chr1:109203997..109204121,- | |id=chr1:109203997..109204121,- | ||
|ontology_enrichment_celltype=CL:0000037!4.42e-13!172;CL:0000566!4.42e-13!172;CL:0000791!9.67e-12!18;CL:0000789!9.67e-12!18;CL:0002420!9.67e-12!18;CL:0002419!9.67e-12!18;CL:0000790!9.67e-12!18;CL:0000084!1.57e-11!25;CL:0000827!1.57e-11!25;CL:0000738!8.54e-11!140;CL:0002032!1.23e-10!165;CL:0000837!1.23e-10!165;CL:0000542!2.05e-10!53;CL:0000051!2.05e-10!53;CL:0000988!2.29e-10!182;CL:0002087!3.42e-10!119;CL:0000838!5.34e-10!52;CL:0000625!1.99e-08!11;CL:0002031!4.17e-08!124 | |ontology_enrichment_celltype=CL:0000037!4.42e-13!172;CL:0000566!4.42e-13!172;CL:0000791!9.67e-12!18;CL:0000789!9.67e-12!18;CL:0002420!9.67e-12!18;CL:0002419!9.67e-12!18;CL:0000790!9.67e-12!18;CL:0000084!1.57e-11!25;CL:0000827!1.57e-11!25;CL:0000738!8.54e-11!140;CL:0002032!1.23e-10!165;CL:0000837!1.23e-10!165;CL:0000542!2.05e-10!53;CL:0000051!2.05e-10!53;CL:0000988!2.29e-10!182;CL:0002087!3.42e-10!119;CL:0000838!5.34e-10!52;CL:0000625!1.99e-08!11;CL:0002031!4.17e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000084;8.63e-16;25!CL:0000791;8.12e-15;18!CL:0000789;8.12e-15;18!CL:0002419;8.12e-15;18!CL:0000625;1.00e-10;11!CL:0000542;2.00e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.05e-16,25;CL:0000827,6.05e-16,25;CL:0000037,1.75e-15,168;CL:0000791,4.67e-15,18;CL:0000789,4.67e-15,18;CL:0002420,4.67e-15,18;CL:0002419,4.67e-15,18;CL:0000790,4.67e-15,18;CL:0000542,1.17e-14,53;CL:0000051,1.17e-14,53;CL:0000838,4.32e-14,52;CL:0000988,3.81e-13,177;CL:0002032,2.34e-12,161;CL:0000837,2.34e-12,161;CL:0000625,1.14e-10,11;CL:0000738,2.17e-10,136;CL:0002087,4.72e-10,115;CL:0002031,4.41e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;8.12e-15;18!CL:0000051;2.00e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;7.99e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.69e-10,39;DOID:2531,3.37e-09,51;DOID:0060083,3.37e-09,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,9.25e-08,19 | |||
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| ||
|short_description=p2@HENMT1 | |short_description=p2@HENMT1 | ||
}} | }} |
Latest revision as of 19:49, 15 September 2015
Short description: | p2@HENMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HENMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000370032, NM_144584, uc001dvu.3, uc009wer.2_5end |
EntrezGene: | HENMT1 |
HGNC: | 26400 |
UniProt: | Q5T8I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.05e-16 | 25 |
pro-T cell | 6.05e-16 | 25 |
hematopoietic stem cell | 1.75e-15 | 168 |
mature alpha-beta T cell | 4.67e-15 | 18 |
alpha-beta T cell | 4.67e-15 | 18 |
immature T cell | 4.67e-15 | 18 |
mature T cell | 4.67e-15 | 18 |
immature alpha-beta T cell | 4.67e-15 | 18 |
lymphocyte | 1.17e-14 | 53 |
common lymphoid progenitor | 1.17e-14 | 53 |
lymphoid lineage restricted progenitor cell | 4.32e-14 | 52 |
hematopoietic cell | 3.81e-13 | 177 |
hematopoietic oligopotent progenitor cell | 2.34e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-12 | 161 |
CD8-positive, alpha-beta T cell | 1.14e-10 | 11 |
leukocyte | 2.17e-10 | 136 |
nongranular leukocyte | 4.72e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.41e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 9.25e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.69e-10 | 39 |
hematologic cancer | 3.37e-09 | 51 |
immune system cancer | 3.37e-09 | 51 |