FFCP PHASE1:Hg19::chr12:41374693..41374709,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:41374693..41374709,+
|short_description=p@chr12:41374693..41374709,+
|description=CAGE_peak_at_chr12:41374693..41374709,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:41374693..41374709,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:41374693..41374709,+ | |||
|id=chr12:41374693..41374709,+ | |||
|ontology_enrichment_celltype=CL:0002594!8.84e-18!4;CL:0002589!1.05e-09!2;CL:0002166!4.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000511;9.79e-26;1!CL:0002625;9.79e-26;1!CL:0000216;9.79e-26;1!CL:0002166;1.10e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,7.62e-26,1;CL:0002625,7.62e-26,1;CL:0000216,7.62e-26,1;CL:0002166,1.10e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.70e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.29e-28;14!DOID:120;4.11e-15;27!DOID:193;4.19e-14;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.39e-28,14;DOID:120,4.27e-15,27;DOID:193,4.33e-14,29 | |||
|ontology_enrichment_uberon=UBERON:0001310!8.84e-18!4;UBERON:0001529!1.05e-09!2;UBERON:0007204!1.05e-09!2;UBERON:0001869!1.16e-08!32;UBERON:0001893!4.41e-08!34;UBERON:0000956!5.70e-07!25;UBERON:0000203!5.70e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;9.12e-31;13!UBERON:0000991;1.56e-29;21!UBERON:0001136;9.79e-26;1!UBERON:0001343;9.79e-26;1!UBERON:0004910;9.79e-26;1!UBERON:0004813;9.79e-26;1!UBERON:0002119;1.43e-25;4!UBERON:0002118;8.13e-21;5!UBERON:0004909;1.37e-13;2!UBERON:0003134;1.53e-12;33!UBERON:0003133;2.14e-09;44!UBERON:0002323;1.21e-08;45!UBERON:0003100;1.35e-08;41!UBERON:0002553;2.05e-08;52!UBERON:0000474;3.36e-08;37!UBERON:0004458;4.00e-08;48!UBERON:0001708;1.40e-07;4!UBERON:0008895;1.40e-07;4!UBERON:0005904;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,9.85e-31,13;UBERON:0000991,1.57e-29,21;UBERON:0009196,1.57e-29,21;UBERON:0009117,1.57e-29,21;UBERON:0005564,1.57e-29,21;UBERON:0004176,3.28e-28,22;UBERON:0001136,7.62e-26,1;UBERON:0001343,7.62e-26,1;UBERON:0004910,7.62e-26,1;UBERON:0005154,7.62e-26,1;UBERON:0005295,7.62e-26,1;UBERON:0004813,7.62e-26,1;UBERON:0005297,7.62e-26,1;UBERON:0005294,7.62e-26,1;UBERON:0010141,7.62e-26,1;UBERON:0005891,7.62e-26,1;UBERON:0002119,1.84e-25,4;UBERON:0002118,7.35e-21,5;UBERON:0002323,1.11e-13,46;UBERON:0004909,1.21e-13,2;UBERON:0003133,4.03e-13,48;UBERON:0004458,7.37e-13,49;UBERON:0003886,1.08e-11,54;UBERON:0003134,3.83e-11,37;UBERON:0000474,3.83e-11,37;UBERON:0005156,1.01e-10,59;UBERON:0000990,1.01e-10,59;UBERON:0002553,2.23e-10,61;UBERON:0003100,4.25e-10,41;UBERON:0001708,1.40e-07,4;UBERON:0008895,1.40e-07,4;UBERON:0005904,1.80e-07,4 | |||
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| ||
|short_description=p@chr12:41374693..41374709,+ | |||
}} | }} |
Latest revision as of 08:26, 24 July 2015
Short description: | p@chr12:41374693..41374709, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41374693..41374709, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 7.62e-26 | 1 |
seminiferous tubule epithelial cell | 7.62e-26 | 1 |
Sertoli cell | 7.62e-26 | 1 |
epithelial cell of Malassez | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
female gonad | 9.85e-31 | 13 |
gonad | 1.57e-29 | 21 |
indifferent external genitalia | 1.57e-29 | 21 |
indifferent gonad | 1.57e-29 | 21 |
gonad primordium | 1.57e-29 | 21 |
external genitalia | 3.28e-28 | 22 |
mesothelium | 7.62e-26 | 1 |
seminiferous tubule of testis | 7.62e-26 | 1 |
epithelium of male gonad | 7.62e-26 | 1 |
epithelial cord | 7.62e-26 | 1 |
sex cord | 7.62e-26 | 1 |
seminiferous tubule epithelium | 7.62e-26 | 1 |
testis sex cord | 7.62e-26 | 1 |
genital ridge | 7.62e-26 | 1 |
primitive sex cord of indifferent gonad | 7.62e-26 | 1 |
coelomic epithelium | 7.62e-26 | 1 |
left ovary | 1.84e-25 | 4 |
right ovary | 7.35e-21 | 5 |
body cavity | 1.11e-13 | 46 |
epithelium of gonad | 1.21e-13 | 2 |
reproductive organ | 4.03e-13 | 48 |
body cavity or lining | 7.37e-13 | 49 |
body cavity precursor | 1.08e-11 | 54 |
female reproductive organ | 3.83e-11 | 37 |
female reproductive system | 3.83e-11 | 37 |
reproductive structure | 1.01e-10 | 59 |
reproductive system | 1.01e-10 | 59 |
anatomical cavity | 2.23e-10 | 61 |
female organism | 4.25e-10 | 41 |
jaw skeleton | 1.40e-07 | 4 |
splanchnocranium | 1.40e-07 | 4 |
duct of male reproductive system | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.39e-28 | 14 |
female reproductive organ cancer | 4.27e-15 | 27 |
reproductive organ cancer | 4.33e-14 | 29 |