FFCP PHASE1:Hg19::chr1:12123952..12123963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12123952..12123963,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr1:12123952..12123963,+ | |description=CAGE_peak_at_chr1:12123952..12123963,+ | ||
|id=chr1:12123952..12123963,+ | |id=chr1:12123952..12123963,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.34e-21!5;CL:0000838!2.29e-11!52;CL:0000080!2.97e-11!6;CL:0000542!4.04e-11!53;CL:0000051!4.04e-11!53;CL:0000945!1.09e-09!24;CL:0000826!1.09e-09!24 | |ontology_enrichment_celltype=CL:0002322!2.34e-21!5;CL:0000838!2.29e-11!52;CL:0000080!2.97e-11!6;CL:0000542!4.04e-11!53;CL:0000051!4.04e-11!53;CL:0000945!1.09e-09!24;CL:0000826!1.09e-09!24 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.76e-09,52;CL:0000542,5.49e-09,53;CL:0000051,5.49e-09,53;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.23e-16!10;DOID:0060060!2.04e-08!1;DOID:0060061!2.04e-08!1;DOID:8691!2.04e-08!1;DOID:630!3.83e-08!1;DOID:0050177!3.83e-08!1;DOID:0050427!3.83e-08!1;DOID:2355!1.06e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.73e-29;1!DOID:0060061;2.73e-29;1!DOID:8691;2.73e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.78e-29,1;DOID:0060061,1.78e-29,1;DOID:8691,1.78e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0001874!5.79e-08!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0000369!2.14e-07!4;UBERON:0002435!2.14e-07!4;UBERON:0000204!2.14e-07!4;UBERON:0010082!2.14e-07!4;UBERON:0002331!6.36e-07!10;UBERON:0000358!6.36e-07!10;UBERON:0000307!6.36e-07!10;UBERON:0000091!6.36e-07!10;UBERON:0000087!6.36e-07!10;UBERON:0007806!6.36e-07!10;UBERON:0008780!6.36e-07!10;UBERON:0005728!6.36e-07!10 | |ontology_enrichment_uberon=UBERON:0001874!5.79e-08!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0000369!2.14e-07!4;UBERON:0002435!2.14e-07!4;UBERON:0000204!2.14e-07!4;UBERON:0010082!2.14e-07!4;UBERON:0002331!6.36e-07!10;UBERON:0000358!6.36e-07!10;UBERON:0000307!6.36e-07!10;UBERON:0000091!6.36e-07!10;UBERON:0000087!6.36e-07!10;UBERON:0007806!6.36e-07!10;UBERON:0008780!6.36e-07!10;UBERON:0005728!6.36e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.55e-26;10!UBERON:0000178;7.82e-18;15!UBERON:0000179;7.82e-18;15!UBERON:0000463;7.82e-18;15!UBERON:0000478;1.97e-11;24!UBERON:0002390;7.89e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.55e-26,10;UBERON:0000358,2.55e-26,10;UBERON:0000307,2.55e-26,10;UBERON:0000091,2.55e-26,10;UBERON:0000087,2.55e-26,10;UBERON:0007010,2.55e-26,10;UBERON:0007806,2.55e-26,10;UBERON:0008780,2.55e-26,10;UBERON:0005728,2.55e-26,10;UBERON:0000178,7.82e-18,15;UBERON:0000179,7.82e-18,15;UBERON:0000463,7.82e-18,15;UBERON:0000478,1.97e-11,24 | |||
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|short_description=p@chr1:12123952..12123963,+ | |short_description=p@chr1:12123952..12123963,+ | ||
}} | }} |
Latest revision as of 20:22, 27 July 2015
Short description: | p@chr1:12123952..12123963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12123952..12123963, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.76e-09 | 52 |
lymphocyte | 5.49e-09 | 53 |
common lymphoid progenitor | 5.49e-09 | 53 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.55e-26 | 10 |
blastocyst | 2.55e-26 | 10 |
blastula | 2.55e-26 | 10 |
bilaminar disc | 2.55e-26 | 10 |
inner cell mass | 2.55e-26 | 10 |
cleaving embryo | 2.55e-26 | 10 |
connecting stalk | 2.55e-26 | 10 |
inner cell mass derived epiblast | 2.55e-26 | 10 |
extraembryonic mesoderm | 2.55e-26 | 10 |
blood | 7.82e-18 | 15 |
haemolymphatic fluid | 7.82e-18 | 15 |
organism substance | 7.82e-18 | 15 |
extraembryonic structure | 1.97e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.78e-29 | 1 |
cutaneous T cell lymphoma | 1.78e-29 | 1 |
mycosis fungoides | 1.78e-29 | 1 |