FFCP PHASE1:Hg19::chr12:48226897..48226922,-: Difference between revisions
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|id=chr12:48226897..48226922,-
|short_description=p17@HDAC7
|description=CAGE_peak_17_at_HDAC7_5end
|association_with_transcript=0bp_to_ENST00000434070_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51564 | |EntrezGene=51564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14067 | |HGNC=14067 | ||
|TSSclassifier=strong | |||
|UniProt=C9JS90 | |UniProt=C9JS90 | ||
|association_with_transcript=0bp_to_ENST00000434070_5end | |||
|cluster_id=chr12:48226897..48226922,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_17_at_HDAC7_5end | |||
|id=chr12:48226897..48226922,- | |||
|ontology_enrichment_celltype=CL:0000838!5.47e-15!52;CL:0000542!1.21e-14!53;CL:0000051!1.21e-14!53;CL:0000084!6.58e-10!25;CL:0000827!6.58e-10!25;CL:0000785!1.85e-09!2;CL:0000955!1.85e-09!2;CL:0000818!1.85e-09!2;CL:0000954!1.85e-09!2;CL:0000816!1.85e-09!2;CL:0000988!5.38e-07!182;CL:0000037!7.82e-07!172;CL:0000566!7.82e-07!172 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.21e-13;2!UBERON:0006965;1.21e-13;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.19e-14!10;DOID:2531!1.82e-09!51;DOID:0060083!1.82e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.30e-10!4;UBERON:0002435!1.30e-10!4;UBERON:0000204!1.30e-10!4;UBERON:0010082!1.30e-10!4;UBERON:0004177!1.91e-10!7;UBERON:0005383!3.85e-07!3;UBERON:0005382!3.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.82e-51;2!UBERON:0005058;8.82e-51;2!UBERON:0009113;8.82e-51;2!UBERON:0004177;4.91e-21;5!UBERON:0005057;4.91e-21;5!UBERON:0001873;1.21e-13;2!UBERON:0005383;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0000204;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.23e-26,4;UBERON:0005058,5.23e-26,4;UBERON:0009113,5.23e-26,4;UBERON:0003295,5.23e-26,4;UBERON:0005562,5.23e-26,4;UBERON:0003351,1.03e-17,6;UBERON:0004177,2.47e-15,7;UBERON:0005057,2.47e-15,7;UBERON:0001873,1.07e-13,2;UBERON:0010122,1.07e-13,2;UBERON:0000974,4.89e-11,10;UBERON:0003408,4.89e-11,10;UBERON:0001042,4.89e-11,10;UBERON:0009145,4.89e-11,10;UBERON:0006562,4.03e-10,11;UBERON:0009722,4.03e-10,11;UBERON:0007690,4.03e-10,11;UBERON:0005383,1.41e-09,3;UBERON:0005382,1.41e-09,3;UBERON:0000369,1.69e-07,4;UBERON:0002435,1.69e-07,4;UBERON:0000204,1.69e-07,4;UBERON:0010082,1.69e-07,4 | |||
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| ||
|short_description=p17@HDAC7 | |||
}} | }} |
Latest revision as of 13:20, 18 September 2015
Short description: | p17@HDAC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_HDAC7_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000434070_5end |
EntrezGene: | HDAC7 |
HGNC: | 14067 |
UniProt: | C9JS90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.23e-26 | 4 |
hemolymphoid system gland | 5.23e-26 | 4 |
thymic region | 5.23e-26 | 4 |
pharyngeal gland | 5.23e-26 | 4 |
thymus primordium | 5.23e-26 | 4 |
pharyngeal epithelium | 1.03e-17 | 6 |
hemopoietic organ | 2.47e-15 | 7 |
immune organ | 2.47e-15 | 7 |
caudate nucleus | 1.07e-13 | 2 |
future caudate nucleus | 1.07e-13 | 2 |
neck | 4.89e-11 | 10 |
gland of gut | 4.89e-11 | 10 |
chordate pharynx | 4.89e-11 | 10 |
pharyngeal region of foregut | 4.89e-11 | 10 |
pharynx | 4.03e-10 | 11 |
entire pharyngeal arch endoderm | 4.03e-10 | 11 |
early pharyngeal endoderm | 4.03e-10 | 11 |
caudate-putamen | 1.41e-09 | 3 |
dorsal striatum | 1.41e-09 | 3 |
corpus striatum | 1.69e-07 | 4 |
striatum | 1.69e-07 | 4 |
ventral part of telencephalon | 1.69e-07 | 4 |
future corpus striatum | 1.69e-07 | 4 |