FFCP PHASE1:Hg19::chr1:145039344..145039357,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9659 | |EntrezGene=9659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |HGNC=15580 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJ85 | |UniProt=E9PJ85 | ||
|association_with_transcript=-266bp_to_ENST00000531369_5end | |association_with_transcript=-266bp_to_ENST00000531369_5end | ||
|cluster_id=chr1:145039344..145039357,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_36_at_PDE4DIP_5end | |description=CAGE_peak_36_at_PDE4DIP_5end | ||
|id=chr1:145039344..145039357,- | |id=chr1:145039344..145039357,- | ||
|ontology_enrichment_celltype=CL:0002057!1.80e-74!42;CL:0000860!5.13e-69!45;CL:0000557!8.35e-57!71;CL:0000766!8.10e-56!76;CL:0002009!2.84e-55!65;CL:0000839!1.47e-50!70;CL:0002194!8.82e-50!63;CL:0000576!8.82e-50!63;CL:0000040!8.82e-50!63;CL:0000559!8.82e-50!63;CL:0000763!3.51e-40!112;CL:0000049!3.51e-40!112;CL:0000738!1.30e-38!140;CL:0002031!3.29e-33!124;CL:0002087!1.13e-30!119;CL:0000037!9.53e-30!172;CL:0000566!9.53e-30!172;CL:0002032!8.26e-28!165;CL:0000837!8.26e-28!165;CL:0000988!1.30e-27!182;CL:0000134!1.11e-13!358;CL:0002320!3.14e-13!365;CL:0000767!3.22e-12!3;CL:0000219!1.24e-11!390;CL:0000048!9.97e-10!430;CL:0000723!1.86e-09!436;CL:0000034!4.16e-09!444;CL:0001014!4.99e-09!2;CL:0001016!4.99e-09!2;CL:0002393!1.57e-07!9;CL:0002397!1.57e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.80e-74!42;CL:0000860!5.13e-69!45;CL:0000557!8.35e-57!71;CL:0000766!8.10e-56!76;CL:0002009!2.84e-55!65;CL:0000839!1.47e-50!70;CL:0002194!8.82e-50!63;CL:0000576!8.82e-50!63;CL:0000040!8.82e-50!63;CL:0000559!8.82e-50!63;CL:0000763!3.51e-40!112;CL:0000049!3.51e-40!112;CL:0000738!1.30e-38!140;CL:0002031!3.29e-33!124;CL:0002087!1.13e-30!119;CL:0000037!9.53e-30!172;CL:0000566!9.53e-30!172;CL:0002032!8.26e-28!165;CL:0000837!8.26e-28!165;CL:0000988!1.30e-27!182;CL:0000134!1.11e-13!358;CL:0002320!3.14e-13!365;CL:0000767!3.22e-12!3;CL:0000219!1.24e-11!390;CL:0000048!9.97e-10!430;CL:0000723!1.86e-09!436;CL:0000034!4.16e-09!444;CL:0001014!4.99e-09!2;CL:0001016!4.99e-09!2;CL:0002393!1.57e-07!9;CL:0002397!1.57e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.06e-69;33!CL:0002057;6.06e-69;33!CL:0000473;6.43e-50;39!CL:0000234;6.43e-50;39!CL:0000576;5.67e-41;48!CL:0000766;8.75e-28;69!CL:0002393;1.05e-14;6!CL:0002397;1.05e-14;6!CL:0002087;6.32e-14;104!CL:0000763;2.90e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.55e-83,42;CL:0002057,2.55e-83,42;CL:0000473,1.43e-72,48;CL:0000234,1.43e-72,48;CL:0002009,1.98e-61,61;CL:0002194,1.64e-57,59;CL:0000576,1.64e-57,59;CL:0000040,1.64e-57,59;CL:0000559,1.64e-57,59;CL:0000557,9.16e-56,67;CL:0000839,3.26e-51,66;CL:0000766,8.95e-47,72;CL:0000763,1.03e-33,108;CL:0000049,1.03e-33,108;CL:0002031,4.44e-30,120;CL:0002087,2.25e-28,115;CL:0000738,3.21e-26,136;CL:0002032,1.04e-21,161;CL:0000837,1.04e-21,161;CL:0000037,1.10e-20,168;CL:0000988,1.75e-19,177;CL:0002393,5.57e-10,9;CL:0002397,5.57e-10,9;CL:0000134,3.63e-08,354;CL:0002320,6.06e-08,361;CL:0000219,3.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-60;42!UBERON:0000358;2.39e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.05e-52!80;UBERON:0001474!1.74e-48!86;UBERON:0002390!6.66e-45!102;UBERON:0003061!6.66e-45!102;UBERON:0004765!1.25e-42!101;UBERON:0001434!1.25e-42!101;UBERON:0002193!3.74e-40!112;UBERON:0002405!2.97e-34!115;UBERON:0002204!1.63e-22!167;UBERON:0003081!1.74e-20!216;UBERON:0002384!1.30e-12!375;UBERON:0000926!6.00e-07!448;UBERON:0004120!6.00e-07!448;UBERON:0006603!6.00e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!1.05e-52!80;UBERON:0001474!1.74e-48!86;UBERON:0002390!6.66e-45!102;UBERON:0003061!6.66e-45!102;UBERON:0004765!1.25e-42!101;UBERON:0001434!1.25e-42!101;UBERON:0002193!3.74e-40!112;UBERON:0002405!2.97e-34!115;UBERON:0002204!1.63e-22!167;UBERON:0003081!1.74e-20!216;UBERON:0002384!1.30e-12!375;UBERON:0000926!6.00e-07!448;UBERON:0004120!6.00e-07!448;UBERON:0006603!6.00e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.43e-49,76;UBERON:0001474,3.54e-45,82;UBERON:0004765,5.92e-41,90;UBERON:0002405,1.48e-39,93;UBERON:0002390,2.06e-37,98;UBERON:0003061,2.06e-37,98;UBERON:0001434,1.30e-36,100;UBERON:0002193,1.03e-33,108;UBERON:0002204,7.96e-21,167;UBERON:0003081,1.71e-18,203;UBERON:0000926,8.25e-11,315;UBERON:0004120,8.25e-11,315;UBERON:0006603,8.25e-11,315;UBERON:0002384,1.22e-07,371 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,12.7418943962332,7.42014455639524,6.07630438004385,0,0,0,0,0,0,1.16214518452842,1.6446715520873,4.02618282163635,2.58923153089935,3.33008918487831,2.83778675866302,7.58440497620561,8.39130088658974,12.1883837934908,0.376484679085209,0.818718450173537,1.12361742222542,4.59125838556354,5.45579346029359,2.55734850319616,0,0.199463657621632,0,1.7412554317715,0.56738522469114,2.4912889959823,0.75374599577023,0.521482918420201,0.868755378820466,0,4.41933163185078,1.26584954976354,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,12.7418943962332,7.42014455639524,6.07630438004385,0,0,0,0,0,0,1.16214518452842,1.6446715520873,4.02618282163635,2.58923153089935,3.33008918487831,2.83778675866302,7.58440497620561,8.39130088658974,12.1883837934908,0.376484679085209,0.818718450173537,1.12361742222542,4.59125838556354,5.45579346029359,2.55734850319616,0,0.199463657621632,0,1.7412554317715,0.56738522469114,2.4912889959823,0.75374599577023,0.521482918420201,0.868755378820466,0,4.41933163185078,1.26584954976354,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p36@PDE4DIP | |short_description=p36@PDE4DIP | ||
}} | }} |
Latest revision as of 17:02, 16 September 2015
Short description: | p36@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_PDE4DIP_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -266bp_to_ENST00000531369_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | E9PJ85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.55e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.55e-83 | 42 |
defensive cell | 1.43e-72 | 48 |
phagocyte | 1.43e-72 | 48 |
macrophage dendritic cell progenitor | 1.98e-61 | 61 |
monopoietic cell | 1.64e-57 | 59 |
monocyte | 1.64e-57 | 59 |
monoblast | 1.64e-57 | 59 |
promonocyte | 1.64e-57 | 59 |
granulocyte monocyte progenitor cell | 9.16e-56 | 67 |
myeloid lineage restricted progenitor cell | 3.26e-51 | 66 |
myeloid leukocyte | 8.95e-47 | 72 |
myeloid cell | 1.03e-33 | 108 |
common myeloid progenitor | 1.03e-33 | 108 |
hematopoietic lineage restricted progenitor cell | 4.44e-30 | 120 |
nongranular leukocyte | 2.25e-28 | 115 |
leukocyte | 3.21e-26 | 136 |
hematopoietic oligopotent progenitor cell | 1.04e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-21 | 161 |
hematopoietic stem cell | 1.10e-20 | 168 |
hematopoietic cell | 1.75e-19 | 177 |
intermediate monocyte | 5.57e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.57e-10 | 9 |
mesenchymal cell | 3.63e-08 | 354 |
connective tissue cell | 6.06e-08 | 361 |
motile cell | 3.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.43e-49 | 76 |
bone element | 3.54e-45 | 82 |
skeletal element | 5.92e-41 | 90 |
immune system | 1.48e-39 | 93 |
hematopoietic system | 2.06e-37 | 98 |
blood island | 2.06e-37 | 98 |
skeletal system | 1.30e-36 | 100 |
hemolymphoid system | 1.03e-33 | 108 |
musculoskeletal system | 7.96e-21 | 167 |
lateral plate mesoderm | 1.71e-18 | 203 |
mesoderm | 8.25e-11 | 315 |
mesoderm-derived structure | 8.25e-11 | 315 |
presumptive mesoderm | 8.25e-11 | 315 |
connective tissue | 1.22e-07 | 371 |