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FFCP PHASE1:Hg19::chr12:52579447..52579461,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:52579447..52579461,-
|DHSsupport=supported 
|short_description=p6@KRT80
|DPIdataset=robust
|description=CAGE_peak_6_at_KRT80_5end
|association_with_transcript=71bp_to_ENST00000466011_5end
|EntrezGene=144501
|EntrezGene=144501
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=27056
|HGNC=27056
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=71bp_to_ENST00000466011_5end
|cluster_id=chr12:52579447..52579461,-
|coexpression_cluster_id=C2214
|description=CAGE_peak_6_at_KRT80_5end
|id=chr12:52579447..52579461,-
|ontology_enrichment_celltype=CL:0000066!7.16e-15!254;CL:0002586!3.44e-11!3;CL:0002150!2.39e-10!3;CL:0000861!2.39e-10!3;CL:0000077!7.73e-10!19;CL:0000076!4.32e-09!62;CL:0000213!5.57e-09!57;CL:0000215!5.57e-09!57;CL:0000149!1.78e-08!4;CL:0000244!1.42e-07!4;CL:0000731!1.42e-07!4
|ontology_enrichment_celltype_v019=CL:0002586;1.40e-40;3!CL:0000149;1.22e-30;4!CL:0000077;1.62e-11;19!CL:0000147;3.30e-09;14!CL:0001014;4.68e-08;2!CL:0001016;4.68e-08;2
|ontology_enrichment_celltype_v019_2=CL:0002586,1.31e-40,3;CL:0000149,1.16e-30,4;CL:0000077,1.76e-11,19;CL:0000147,3.25e-09,14;CL:0001014,4.09e-08,2;CL:0001016,4.09e-08,2
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:3151;2.25e-14;1!DOID:3149;2.25e-14;1!DOID:3451;7.78e-08;2!DOID:4159;7.78e-08;2!DOID:4074;7.78e-08;2!DOID:4905;7.78e-08;2!DOID:0060122;7.78e-08;2!DOID:3498;7.78e-08;2
|ontology_enrichment_disease_v019_2=DOID:3151,3.15e-14,1;DOID:3149,3.15e-14,1;DOID:4074,6.58e-08,2;DOID:4905,6.58e-08,2;DOID:3498,6.58e-08,2;DOID:3451,9.19e-08,2;DOID:4159,9.19e-08,2;DOID:0060122,9.19e-08,2
|ontology_enrichment_uberon=UBERON:0001737!4.97e-21!9;UBERON:0001557!1.73e-11!19;UBERON:0001781!3.44e-11!3;UBERON:0001782!3.44e-11!3;UBERON:0005424!3.44e-11!3;UBERON:0005910!2.12e-08!6;UBERON:0007625!2.90e-07!11;UBERON:0000966!7.73e-07!5;UBERON:0005388!7.73e-07!5;UBERON:0001802!7.73e-07!5
|ontology_enrichment_uberon_v019=UBERON:0001781;1.40e-40;3!UBERON:0001782;1.40e-40;3!UBERON:0000966;1.15e-24;5!UBERON:0005388;1.15e-24;5!UBERON:0001802;1.15e-24;5!UBERON:0007029;2.25e-14;1!UBERON:0000014;5.37e-14;4!UBERON:0007625;1.44e-11;11!UBERON:0000019;6.43e-07;19!UBERON:0000047;6.43e-07;19!UBERON:0004088;6.43e-07;19!UBERON:0010230;6.43e-07;19!UBERON:0010371;8.63e-07;31
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.31e-40,3;UBERON:0005424,1.31e-40,3;UBERON:0001781,1.16e-30,4;UBERON:0000966,1.09e-20,6;UBERON:0005388,1.09e-20,6;UBERON:0001802,1.09e-20,6;UBERON:0007029,2.11e-14,1;UBERON:0000014,6.13e-14,4;UBERON:0007625,1.42e-11,11
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|short_description=p6@KRT80
}}
}}

Latest revision as of 21:43, 18 September 2015

Short description:p6@KRT80
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_KRT80_5end
Coexpression cluster:C2214_Retinal_mesothelioma_anaplastic_glioblastoma_immature_ductal_cervical
Association with transcript: 71bp_to_ENST00000466011_5end
EntrezGene:KRT80
HGNC: 27056
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data