FFCP PHASE1:Hg19::chr1:156829946..156829956,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156829946..156829956,- | |||
|description=CAGE_peak_at_chr1:156829946..156829956,- | |description=CAGE_peak_at_chr1:156829946..156829956,- | ||
|id=chr1:156829946..156829956,- | |id=chr1:156829946..156829956,- | ||
|ontology_enrichment_celltype=CL:0002553!1.21e-09!1 | |ontology_enrichment_celltype=CL:0002553!1.21e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.10e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;2.98e-08;22!DOID:2994;2.98e-08;22!DOID:169;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22;DOID:169,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000369!2.19e-18!4;UBERON:0002435!2.19e-18!4;UBERON:0000204!2.19e-18!4;UBERON:0010082!2.19e-18!4;UBERON:0002308!2.43e-14!9;UBERON:0000125!2.43e-14!9;UBERON:0000073!1.17e-13!94;UBERON:0001016!1.17e-13!94;UBERON:0000988!6.73e-12!3;UBERON:0002616!9.30e-12!59;UBERON:0005383!1.04e-11!3;UBERON:0005382!1.04e-11!3;UBERON:0004733!4.96e-11!12;UBERON:0002028!4.96e-11!12;UBERON:0007277!4.96e-11!12;UBERON:0005743!5.48e-11!86;UBERON:0009663!9.43e-11!7;UBERON:0004732!3.41e-10!13;UBERON:0001049!7.48e-10!57;UBERON:0005068!7.48e-10!57;UBERON:0006241!7.48e-10!57;UBERON:0007135!7.48e-10!57;UBERON:0002298!8.84e-10!8;UBERON:0001017!1.07e-09!82;UBERON:0000955!1.09e-09!69;UBERON:0006238!1.09e-09!69;UBERON:0001874!1.69e-09!1;UBERON:0007190!4.87e-09!1;UBERON:0001882!5.72e-09!1;UBERON:0005403!5.72e-09!1;UBERON:0003076!7.47e-09!15;UBERON:0003057!7.47e-09!15;UBERON:0002680!1.18e-08!9;UBERON:0001895!1.18e-08!9;UBERON:0010092!1.18e-08!9;UBERON:0002420!1.79e-08!9;UBERON:0007245!1.79e-08!9;UBERON:0010009!1.79e-08!9;UBERON:0010011!1.79e-08!9;UBERON:0000454!1.79e-08!9;UBERON:0007023!7.17e-08!115;UBERON:0004121!8.90e-08!169;UBERON:0003075!1.40e-07!86;UBERON:0007284!1.40e-07!86;UBERON:0000924!1.54e-07!173;UBERON:0006601!1.54e-07!173;UBERON:0000013!1.88e-07!5;UBERON:0002410!1.88e-07!5;UBERON:0002346!3.54e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0000988;1.71e-14;3!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0000013;3.10e-09;5!UBERON:0002410;3.10e-09;5!UBERON:0002298;6.55e-08;6!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.66e-21,2;UBERON:0002757,4.66e-21,2;UBERON:0010134,4.66e-21,2;UBERON:0005408,4.66e-21,2;UBERON:0001899,4.66e-21,2;UBERON:0000988,1.83e-14,3;UBERON:0003296,3.10e-11,4;UBERON:0010133,3.10e-11,4;UBERON:0002784,3.10e-11,4;UBERON:0000013,3.49e-09,5;UBERON:0002410,3.49e-09,5;UBERON:0002298,6.78e-08,6;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7 | |||
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|short_description=p@chr1:156829946..156829956,- | |short_description=p@chr1:156829946..156829956,- | ||
}} | }} |
Latest revision as of 22:46, 27 July 2015
Short description: | p@chr1:156829946..156829956, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156829946..156829956, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.66e-21 | 2 |
regional part of epithalamus | 4.66e-21 | 2 |
secretory circumventricular organ | 4.66e-21 | 2 |
circumventricular organ | 4.66e-21 | 2 |
epithalamus | 4.66e-21 | 2 |
pons | 1.83e-14 | 3 |
gland of diencephalon | 3.10e-11 | 4 |
neuroendocrine gland | 3.10e-11 | 4 |
regional part of diencephalon | 3.10e-11 | 4 |
sympathetic nervous system | 3.49e-09 | 5 |
autonomic nervous system | 3.49e-09 | 5 |
brainstem | 6.78e-08 | 6 |
diencephalon | 5.70e-07 | 7 |
future diencephalon | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |
neuroendocrine tumor | 7.25e-08 | 6 |