FFCP PHASE1:Hg19::chr4:154605395..154605471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7097 | |EntrezGene=7097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11848 | |HGNC=11848 | ||
|TSSclassifier=strong | |||
|UniProt=B3KWR9,D1CS45,O60603 | |UniProt=B3KWR9,D1CS45,O60603 | ||
|association_with_transcript=0bp_to_NM_003264,uc003inn.1,uc003ino.1,uc003inp.1,uc003inq.2,uc003inr.2_5end | |association_with_transcript=0bp_to_NM_003264,uc003inn.1,uc003ino.1,uc003inp.1,uc003inq.2,uc003inr.2_5end | ||
|cluster_id=chr4:154605395..154605471,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_TLR2_5end | |description=CAGE_peak_1_at_TLR2_5end | ||
|id=chr4:154605395..154605471,+ | |id=chr4:154605395..154605471,+ | ||
|ontology_enrichment_celltype=CL:0000766!8.08e-34!76;CL:0002009!7.74e-31!65;CL:0002194!9.06e-31!63;CL:0000576!9.06e-31!63;CL:0000040!9.06e-31!63;CL:0000559!9.06e-31!63;CL:0000557!4.61e-29!71;CL:0002057!1.95e-28!42;CL:0000839!6.18e-27!70;CL:0000860!9.11e-25!45;CL:0000763!4.70e-23!112;CL:0000049!4.70e-23!112;CL:0000738!8.43e-23!140;CL:0002087!2.69e-20!119;CL:0000037!4.73e-19!172;CL:0000566!4.73e-19!172;CL:0002031!1.67e-17!124;CL:0002032!1.90e-17!165;CL:0000837!1.90e-17!165;CL:0000988!2.02e-16!182;CL:0002393!9.86e-07!9;CL:0002397!9.86e-07!9 | |ontology_enrichment_celltype=CL:0000766!8.08e-34!76;CL:0002009!7.74e-31!65;CL:0002194!9.06e-31!63;CL:0000576!9.06e-31!63;CL:0000040!9.06e-31!63;CL:0000559!9.06e-31!63;CL:0000557!4.61e-29!71;CL:0002057!1.95e-28!42;CL:0000839!6.18e-27!70;CL:0000860!9.11e-25!45;CL:0000763!4.70e-23!112;CL:0000049!4.70e-23!112;CL:0000738!8.43e-23!140;CL:0002087!2.69e-20!119;CL:0000037!4.73e-19!172;CL:0000566!4.73e-19!172;CL:0002031!1.67e-17!124;CL:0002032!1.90e-17!165;CL:0000837!1.90e-17!165;CL:0000988!2.02e-16!182;CL:0002393!9.86e-07!9;CL:0002397!9.86e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-23;33!CL:0002057;2.63e-23;33!CL:0000473;1.18e-22;39!CL:0000234;1.18e-22;39!CL:0000576;3.45e-22;48!CL:0000766;6.48e-18;69!CL:0000763;3.31e-10;100!CL:0002087;1.03e-07;104!CL:0000094;2.97e-07;8!CL:0000738;6.40e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.80e-43,72;CL:0002194,1.82e-39,59;CL:0000576,1.82e-39,59;CL:0000040,1.82e-39,59;CL:0000559,1.82e-39,59;CL:0002009,2.00e-39,61;CL:0000557,2.29e-37,67;CL:0000473,3.16e-35,48;CL:0000234,3.16e-35,48;CL:0000839,1.14e-34,66;CL:0000860,1.73e-31,42;CL:0002057,1.73e-31,42;CL:0000763,1.27e-29,108;CL:0000049,1.27e-29,108;CL:0000738,1.53e-27,136;CL:0002087,1.11e-24,115;CL:0000037,9.34e-24,168;CL:0002032,9.05e-22,161;CL:0000837,9.05e-22,161;CL:0002031,1.70e-21,120;CL:0000988,6.86e-21,177;CL:0002393,2.54e-07,9;CL:0002397,2.54e-07,9;CL:0000094,3.03e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.12e-23;42!CL:0000049;7.98e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.67e-27!112;UBERON:0007023!4.50e-27!115;UBERON:0002390!5.64e-27!102;UBERON:0003061!5.64e-27!102;UBERON:0002371!2.89e-23!80;UBERON:0001474!2.92e-19!86;UBERON:0002405!3.61e-18!115;UBERON:0004765!5.03e-18!101;UBERON:0001434!5.03e-18!101;UBERON:0002204!6.03e-08!167;UBERON:0003081!3.57e-07!216;UBERON:0001049!6.91e-07!57;UBERON:0005068!6.91e-07!57;UBERON:0006241!6.91e-07!57;UBERON:0007135!6.91e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.76e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.18e-35,108;UBERON:0002390,6.24e-35,98;UBERON:0003061,6.24e-35,98;UBERON:0002371,1.16e-30,76;UBERON:0002405,3.39e-30,93;UBERON:0007023,3.40e-27,114;UBERON:0001474,7.30e-26,82;UBERON:0004765,7.94e-26,90;UBERON:0001434,4.21e-23,100;UBERON:0003081,2.69e-09,203;UBERON:0002204,4.71e-09,167 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,1.89515962028049,0,0.982935746006035,0.697801167972428,1.74753097704138,0.263766978228454,2.35156070624089,0,2.6893005858071,1.20538905604795,0,1.46379839637152,0,0,0,0,0.410623275218653,0.125542639594803,0,0.0821005894499457,0,60.1847343578823,80.2203442023174,100.320847908817,0,0.6024118375565,0.739508020333575,0,0,12.6248188913984,231.570080766325,226.81577008873,143.661196413894,98.7467241398066,75.4672241824222,97.6211401333567,195.996825874853,142.459230770681,159.620312261583,609.661363803611,395.954676165018,662.152220973731,585.454018375576,303.550437236984,706.135938447316,616.060531476337,415.0466515444,606.710659942651,359.354626186832,217.233295446045,482.481321103597,728.479663842748,512.523656240522,538.321859922793,346.673716496239,267.281301212987,350.356744937875,789.949547547006,432.347541214649,682.61318489915,378.631738541912,269.606668823244,476.729514127731,603.583304125469,665.477688229529,1008.24916638666,163.511591605443,162.429685173293,131.036653442735,217.580558530761,258.304255687391,205.246574212171,96.9043328720245,131.881756982997,105.397216722194,0,8.19207916893197,1.77901850772711,24.7503529088574,4.40435585739614,6.32227683949932,5.94940385506376,3.81621501814146,4.55370375287559,11.7447437874188,6.11637165000366,5.28685314316103,42.0381422236152,19.4904222733557,1.180258620683,3.14408610199332,3.28962398399215,0.167186495390678,0.651844533267181,1.4203434172042,0,0.668462741311041,0.589211814949674,0.664601683750863,1.08321545506006,0.384273959177026,0.130059347559878,3.12432018746985,1.93445012450094,2.02862160014537,1.77943875794473,1.87278579662799,2.09071047609954,0.566546713487831,0.766440987203842,2.06176467289578,1.01207876807801,4.14135038621326,0.651083453856419,0,14.605786550544,7.29523683580185,17.4903017173284,18.9421801635213,3.28451198768419,1.20964045934839,0.802320587350522,1.44824403882799,0,0,0.12786256184353,0,0,0.144846518960824,15.905718941022,27.2515527369476,0.283604451492204,0.886917589850256,0.790513071238134,4.1913304159268,0.364295288292542,0,21.0955805875544,18.2836224164231,26.9904659853296,14.5479280826259,10.8679033048224,4.45749001595478,0,0.860234595106124,0,0,0,0,0.208994966536811,1.03366703667732,3.5576626268671,1.00416183829401,3.22263453687318,0.760272105718513,3.66093086322254,0,0.81014194788176,0,0,0.112611480483322,0,0,0,1303.30832844267,1461.93159583919,2.61656431285521,0,0.25326102332916,0,0,3.90135220418193,0,0,0.24666754841716,0,0.808264032418128,0.163461903113459,0,0,0,4.68240115245481,6.84566185853339,10.9097536802815,2.81842796745036,3.39933183173076,4.3539750077697,6.1246251376468,3.68502951935304,3.40975077880026,0,0.494533858557114,0,0,4.20840284885166,1.12606667884768,5.26421819419948,0.438977620880838,0,0.751190294532984,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.508681776931463,13.1417380151042,13.6373060295417,9.46455164783713,0.487894824518382,0,0.232387885739037,0.414644220061482,0.756962552626885,0.36497735907583,0,0,0,9.75172648867156,0.721879481669586,0.118306800039844,0,0,0,0,0,0.539325232640658,0,0,0,0,0.8231480226628,0,6.33775174109154,31.450470933684,4.13552934676983,0,1.59884970106048,0.857839051492628,2.52425656439839,2.24803506515239,0.402115889646523,1.75918045801206,0,0,0,0.34779121492523,0.469634776943287,25.408494805949,19.4453915282177,23.5915148770902,2.37061319387782,2.57545848628462,161.76457299942,91.0276591391635,122.026184239046,4.68669169933885,10.5828740765282,7.23052995936171,45.6748465784526,27.6102241588264,1.91691339582606,0,0,4.14656231081544,3.17063897517315,1.8936365013957,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,2.5724378936752,0,0,0.07333828582095,0.258543431515556,0,3.381211010224,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,2.28015329005615,0,0,16.2777263612176,3.48613383440118,4.69873058555668,48.6495122564762,67.8047073433371,73.7918788190611,0,0,0,0.868687840005475,1.02738161275192,6.98337756635593,0,9.26044572949058,1.72502059887614,7.05886699538616,0,0,0,1.34013012267479,0.637938751653163,833.644817653214,744.912033418022,1198.07524934358,2.33113834266366,1.50051156317903,1.35632511849868,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.368738337083406,1.91143951829782,0.195801157462741,0.343143423810856,89.1170192589645,102.464245388843,78.2312998699247,1.21251028578504,0,0.604780586659361,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,2.90062679019893,7.81975234182811,0.184161977871793,0,0.182091168006717,0.393373244878272,1.80479845162965,5.39107359730903,3.13739907670742,0,7.59971728028705,0,0.340187410553031,0.431831832204279,0,1.35473218771926,1.50506932156456,3.05851527654046,2.49322802678617,1.79099803777743,0.219259876645935,0,0,1.31205858279882,0.650756789328606,27.5119501099418,0,0.660075999364704,5.16838984196555,2.60024098414608,0,0.773365746336976,0,0,2.75673144969061,2.90034661144339,0.580066775656914,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|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,1.89515962028049,0,0.982935746006035,0.697801167972428,1.74753097704138,0.263766978228454,2.35156070624089,0,2.6893005858071,1.20538905604795,0,1.46379839637152,0,0,0,0,0.410623275218653,0.125542639594803,0,0.0821005894499457,0,60.1847343578823,80.2203442023174,100.320847908817,0,0.6024118375565,0.739508020333575,0,0,12.6248188913984,231.570080766325,226.81577008873,143.661196413894,98.7467241398066,75.4672241824222,97.6211401333567,195.996825874853,142.459230770681,159.620312261583,609.661363803611,395.954676165018,662.152220973731,585.454018375576,303.550437236984,706.135938447316,616.060531476337,415.0466515444,606.710659942651,359.354626186832,217.233295446045,482.481321103597,728.479663842748,512.523656240522,538.321859922793,346.673716496239,267.281301212987,350.356744937875,789.949547547006,432.347541214649,682.61318489915,378.631738541912,269.606668823244,476.729514127731,603.583304125469,665.477688229529,1008.24916638666,163.511591605443,162.429685173293,131.036653442735,217.580558530761,258.304255687391,205.246574212171,96.9043328720245,131.881756982997,105.397216722194,0,8.19207916893197,1.77901850772711,24.7503529088574,4.40435585739614,6.32227683949932,5.94940385506376,3.81621501814146,4.55370375287559,11.7447437874188,6.11637165000366,5.28685314316103,42.0381422236152,19.4904222733557,1.180258620683,3.14408610199332,3.28962398399215,0.167186495390678,0.651844533267181,1.4203434172042,0,0.668462741311041,0.589211814949674,0.664601683750863,1.08321545506006,0.384273959177026,0.130059347559878,3.12432018746985,1.93445012450094,2.02862160014537,1.77943875794473,1.87278579662799,2.09071047609954,0.566546713487831,0.766440987203842,2.06176467289578,1.01207876807801,4.14135038621326,0.651083453856419,0,14.605786550544,7.29523683580185,17.4903017173284,18.9421801635213,3.28451198768419,1.20964045934839,0.802320587350522,1.44824403882799,0,0,0.12786256184353,0,0,0.144846518960824,15.905718941022,27.2515527369476,0.283604451492204,0.886917589850256,0.790513071238134,4.1913304159268,0.364295288292542,0,21.0955805875544,18.2836224164231,26.9904659853296,14.5479280826259,10.8679033048224,4.45749001595478,0,0.860234595106124,0,0,0,0,0.208994966536811,1.03366703667732,3.5576626268671,1.00416183829401,3.22263453687318,0.760272105718513,3.66093086322254,0,0.81014194788176,0,0,0.112611480483322,0,0,0,1303.30832844267,1461.93159583919,2.61656431285521,0,0.25326102332916,0,0,3.90135220418193,0,0,0.24666754841716,0,0.808264032418128,0.163461903113459,0,0,0,4.68240115245481,6.84566185853339,10.9097536802815,2.81842796745036,3.39933183173076,4.3539750077697,6.1246251376468,3.68502951935304,3.40975077880026,0,0.494533858557114,0,0,4.20840284885166,1.12606667884768,5.26421819419948,0.438977620880838,0,0.751190294532984,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.508681776931463,13.1417380151042,13.6373060295417,9.46455164783713,0.487894824518382,0,0.232387885739037,0.414644220061482,0.756962552626885,0.36497735907583,0,0,0,9.75172648867156,0.721879481669586,0.118306800039844,0,0,0,0,0,0.539325232640658,0,0,0,0,0.8231480226628,0,6.33775174109154,31.450470933684,4.13552934676983,0,1.59884970106048,0.857839051492628,2.52425656439839,2.24803506515239,0.402115889646523,1.75918045801206,0,0,0,0.34779121492523,0.469634776943287,25.408494805949,19.4453915282177,23.5915148770902,2.37061319387782,2.57545848628462,161.76457299942,91.0276591391635,122.026184239046,4.68669169933885,10.5828740765282,7.23052995936171,45.6748465784526,27.6102241588264,1.91691339582606,0,0,4.14656231081544,3.17063897517315,1.8936365013957,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,2.5724378936752,0,0,0.07333828582095,0.258543431515556,0,3.381211010224,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,2.28015329005615,0,0,16.2777263612176,3.48613383440118,4.69873058555668,48.6495122564762,67.8047073433371,73.7918788190611,0,0,0,0.868687840005475,1.02738161275192,6.98337756635593,0,9.26044572949058,1.72502059887614,7.05886699538616,0,0,0,1.34013012267479,0.637938751653163,833.644817653214,744.912033418022,1198.07524934358,2.33113834266366,1.50051156317903,1.35632511849868,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.368738337083406,1.91143951829782,0.195801157462741,0.343143423810856,89.1170192589645,102.464245388843,78.2312998699247,1.21251028578504,0,0.604780586659361,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,2.90062679019893,7.81975234182811,0.184161977871793,0,0.182091168006717,0.393373244878272,1.80479845162965,5.39107359730903,3.13739907670742,0,7.59971728028705,0,0.340187410553031,0.431831832204279,0,1.35473218771926,1.50506932156456,3.05851527654046,2.49322802678617,1.79099803777743,0.219259876645935,0,0,1.31205858279882,0.650756789328606,27.5119501099418,0,0.660075999364704,5.16838984196555,2.60024098414608,0,0.773365746336976,0,0,2.75673144969061,2.90034661144339,0.580066775656914,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| ||
|short_description=p1@TLR2 | |short_description=p1@TLR2 | ||
}} | }} |
Latest revision as of 05:21, 16 September 2015
Short description: | p1@TLR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLR2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_NM_003264, uc003inn.1, uc003ino.1, uc003inp.1, uc003inq.2, uc003inr.2_5end |
EntrezGene: | TLR2 |
HGNC: | 11848 |
UniProt: | B3KWR9D1CS45O60603 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.80e-43 | 72 |
monopoietic cell | 1.82e-39 | 59 |
monocyte | 1.82e-39 | 59 |
monoblast | 1.82e-39 | 59 |
promonocyte | 1.82e-39 | 59 |
macrophage dendritic cell progenitor | 2.00e-39 | 61 |
granulocyte monocyte progenitor cell | 2.29e-37 | 67 |
defensive cell | 3.16e-35 | 48 |
phagocyte | 3.16e-35 | 48 |
myeloid lineage restricted progenitor cell | 1.14e-34 | 66 |
classical monocyte | 1.73e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-31 | 42 |
myeloid cell | 1.27e-29 | 108 |
common myeloid progenitor | 1.27e-29 | 108 |
leukocyte | 1.53e-27 | 136 |
nongranular leukocyte | 1.11e-24 | 115 |
hematopoietic stem cell | 9.34e-24 | 168 |
hematopoietic oligopotent progenitor cell | 9.05e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.05e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 1.70e-21 | 120 |
hematopoietic cell | 6.86e-21 | 177 |
intermediate monocyte | 2.54e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.54e-07 | 9 |
granulocyte | 3.03e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.18e-35 | 108 |
hematopoietic system | 6.24e-35 | 98 |
blood island | 6.24e-35 | 98 |
bone marrow | 1.16e-30 | 76 |
immune system | 3.39e-30 | 93 |
adult organism | 3.40e-27 | 114 |
bone element | 7.30e-26 | 82 |
skeletal element | 7.94e-26 | 90 |
skeletal system | 4.21e-23 | 100 |
lateral plate mesoderm | 2.69e-09 | 203 |
musculoskeletal system | 4.71e-09 | 167 |