FFCP PHASE1:Hg19::chr1:181013908..181013945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:181013908..181013945,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_at_chr1:181013908..181013945,+ | |description=CAGE_peak_at_chr1:181013908..181013945,+ | ||
|id=chr1:181013908..181013945,+ | |id=chr1:181013908..181013945,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.67e-42!42;CL:0000860!7.62e-38!45;CL:0002009!2.22e-24!65;CL:0002194!2.95e-24!63;CL:0000576!2.95e-24!63;CL:0000040!2.95e-24!63;CL:0000559!2.95e-24!63;CL:0000766!4.23e-21!76;CL:0000557!5.15e-21!71;CL:0000839!2.53e-20!70;CL:0000738!1.01e-14!140;CL:0000763!1.52e-14!112;CL:0000049!1.52e-14!112;CL:0002087!1.63e-14!119;CL:0002031!9.90e-13!124;CL:0000223!2.85e-12!59;CL:0002032!2.25e-10!165;CL:0000837!2.25e-10!165;CL:0002076!2.34e-10!43;CL:0000988!2.47e-10!182;CL:0000037!3.41e-10!172;CL:0000566!3.41e-10!172;CL:0002251!4.44e-09!21;CL:0002393!6.26e-09!9;CL:0002397!6.26e-09!9;CL:0000066!7.53e-08!254 | |ontology_enrichment_celltype=CL:0002057!9.67e-42!42;CL:0000860!7.62e-38!45;CL:0002009!2.22e-24!65;CL:0002194!2.95e-24!63;CL:0000576!2.95e-24!63;CL:0000040!2.95e-24!63;CL:0000559!2.95e-24!63;CL:0000766!4.23e-21!76;CL:0000557!5.15e-21!71;CL:0000839!2.53e-20!70;CL:0000738!1.01e-14!140;CL:0000763!1.52e-14!112;CL:0000049!1.52e-14!112;CL:0002087!1.63e-14!119;CL:0002031!9.90e-13!124;CL:0000223!2.85e-12!59;CL:0002032!2.25e-10!165;CL:0000837!2.25e-10!165;CL:0002076!2.34e-10!43;CL:0000988!2.47e-10!182;CL:0000037!3.41e-10!172;CL:0000566!3.41e-10!172;CL:0002251!4.44e-09!21;CL:0002393!6.26e-09!9;CL:0002397!6.26e-09!9;CL:0000066!7.53e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.77e-49;33!CL:0002057;8.77e-49;33!CL:0000473;8.40e-32;39!CL:0000234;8.40e-32;39!CL:0000576;1.82e-29;48!CL:0000766;2.67e-18;69!CL:0002087;9.23e-08;104!CL:0000763;3.29e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.52e-53,42;CL:0002057,9.52e-53,42;CL:0000473,4.37e-45,48;CL:0000234,4.37e-45,48;CL:0002194,2.24e-34,59;CL:0000576,2.24e-34,59;CL:0000040,2.24e-34,59;CL:0000559,2.24e-34,59;CL:0002009,5.36e-33,61;CL:0000766,7.64e-31,72;CL:0000839,6.53e-30,66;CL:0000557,2.38e-29,67;CL:0000763,3.13e-19,108;CL:0000049,3.13e-19,108;CL:0002087,1.53e-17,115;CL:0000738,6.62e-17,136;CL:0002031,1.84e-16,120;CL:0002032,6.82e-13,161;CL:0000837,6.82e-13,161;CL:0000037,5.44e-12,168;CL:0000988,7.61e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-37;42 | |||
|ontology_enrichment_disease=DOID:1749!8.53e-10!14 | |ontology_enrichment_disease=DOID:1749!8.53e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.68e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.15e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.74e-17!115;UBERON:0002390!5.33e-17!102;UBERON:0003061!5.33e-17!102;UBERON:0002371!5.70e-17!80;UBERON:0001474!8.77e-15!86;UBERON:0002193!9.76e-15!112;UBERON:0004765!3.29e-12!101;UBERON:0001434!3.29e-12!101;UBERON:0004119!4.33e-10!169;UBERON:0000925!4.33e-10!169;UBERON:0006595!4.33e-10!169;UBERON:0005911!6.43e-10!82;UBERON:0001007!1.38e-07!155;UBERON:0001555!1.38e-07!155;UBERON:0007026!1.38e-07!155;UBERON:0000344!7.05e-07!12;UBERON:0004921!9.35e-07!129;UBERON:0004185!9.35e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003350;2.81e-08;8!UBERON:0000344;2.69e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.93e-25,76;UBERON:0004765,3.95e-23,90;UBERON:0001474,1.47e-22,82;UBERON:0001434,5.45e-20,100;UBERON:0002390,4.11e-19,98;UBERON:0003061,4.11e-19,98;UBERON:0002405,5.63e-19,93;UBERON:0002193,1.31e-16,108;UBERON:0002204,8.21e-09,167;UBERON:0003350,2.60e-08,8;UBERON:0000344,2.44e-07,20 | |||
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|short_description=p@chr1:181013908..181013945,+ | |short_description=p@chr1:181013908..181013945,+ | ||
}} | }} |
Latest revision as of 00:58, 28 July 2015
Short description: | p@chr1:181013908..181013945, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:181013908..181013945, + |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.52e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.52e-53 | 42 |
defensive cell | 4.37e-45 | 48 |
phagocyte | 4.37e-45 | 48 |
monopoietic cell | 2.24e-34 | 59 |
monocyte | 2.24e-34 | 59 |
monoblast | 2.24e-34 | 59 |
promonocyte | 2.24e-34 | 59 |
macrophage dendritic cell progenitor | 5.36e-33 | 61 |
myeloid leukocyte | 7.64e-31 | 72 |
myeloid lineage restricted progenitor cell | 6.53e-30 | 66 |
granulocyte monocyte progenitor cell | 2.38e-29 | 67 |
myeloid cell | 3.13e-19 | 108 |
common myeloid progenitor | 3.13e-19 | 108 |
nongranular leukocyte | 1.53e-17 | 115 |
leukocyte | 6.62e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.84e-16 | 120 |
hematopoietic oligopotent progenitor cell | 6.82e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.82e-13 | 161 |
hematopoietic stem cell | 5.44e-12 | 168 |
hematopoietic cell | 7.61e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.93e-25 | 76 |
skeletal element | 3.95e-23 | 90 |
bone element | 1.47e-22 | 82 |
skeletal system | 5.45e-20 | 100 |
hematopoietic system | 4.11e-19 | 98 |
blood island | 4.11e-19 | 98 |
immune system | 5.63e-19 | 93 |
hemolymphoid system | 1.31e-16 | 108 |
musculoskeletal system | 8.21e-09 | 167 |
epithelium of mucosa | 2.60e-08 | 8 |
mucosa | 2.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.15e-08 | 14 |