FFCP PHASE1:Hg19::chr1:209849359..209849383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209849359..209849383,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr1:209849359..209849383,+ | |description=CAGE_peak_at_chr1:209849359..209849383,+ | ||
|id=chr1:209849359..209849383,+ | |id=chr1:209849359..209849383,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.31e-27!42;CL:0000860!5.52e-24!45;CL:0000766!1.63e-21!76;CL:0002009!3.06e-16!65;CL:0002194!4.44e-16!63;CL:0000576!4.44e-16!63;CL:0000040!4.44e-16!63;CL:0000559!4.44e-16!63;CL:0000557!2.59e-15!71;CL:0000839!1.05e-14!70;CL:0000136!4.70e-11!15;CL:0000763!5.56e-11!112;CL:0000049!5.56e-11!112;CL:0000738!6.02e-10!140;CL:0000094!3.69e-09!8 | |ontology_enrichment_celltype=CL:0002057!8.31e-27!42;CL:0000860!5.52e-24!45;CL:0000766!1.63e-21!76;CL:0002009!3.06e-16!65;CL:0002194!4.44e-16!63;CL:0000576!4.44e-16!63;CL:0000040!4.44e-16!63;CL:0000559!4.44e-16!63;CL:0000557!2.59e-15!71;CL:0000839!1.05e-14!70;CL:0000136!4.70e-11!15;CL:0000763!5.56e-11!112;CL:0000049!5.56e-11!112;CL:0000738!6.02e-10!140;CL:0000094!3.69e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-36;33!CL:0002057;3.42e-36;33!CL:0000473;4.71e-24;39!CL:0000234;4.71e-24;39!CL:0000576;2.21e-20;48!CL:0000094;1.30e-18;8!CL:0000136;1.05e-16;13!CL:0000766;1.20e-16;69!CL:0000081;4.30e-13;11!CL:0002368;2.84e-10;13!CL:0002202;5.03e-09;9!CL:0002632;5.03e-09;9!CL:0000775;6.25e-09;3!CL:0002328;6.70e-08;3!CL:0002521;7.80e-08;3!CL:0000307;1.02e-07;3!CL:0000763;2.35e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.84e-38,42;CL:0002057,1.84e-38,42;CL:0000766,1.09e-33,72;CL:0000473,1.43e-32,48;CL:0000234,1.43e-32,48;CL:0002009,4.00e-25,61;CL:0002194,2.32e-24,59;CL:0000576,2.32e-24,59;CL:0000040,2.32e-24,59;CL:0000559,2.32e-24,59;CL:0000557,3.78e-22,67;CL:0000839,5.99e-21,66;CL:0000763,2.47e-20,108;CL:0000049,2.47e-20,108;CL:0000094,1.38e-18,8;CL:0000738,2.97e-17,136;CL:0000136,4.39e-14,15;CL:0000081,4.49e-13,11;CL:0000037,5.91e-12,168;CL:0002087,1.52e-11,115;CL:0002032,3.40e-11,161;CL:0000837,3.40e-11,161;CL:0000988,7.87e-11,177;CL:0002368,2.65e-10,13;CL:0002031,8.50e-10,120;CL:0002202,4.90e-09,9;CL:0002632,4.90e-09,9;CL:0000775,6.34e-09,3;CL:0002328,7.20e-08,3;CL:0002521,8.28e-08,3;CL:0000134,8.80e-08,354;CL:0000068,9.09e-08,3;CL:0000069,9.09e-08,3;CL:0000307,9.09e-08,3;CL:0000377,9.09e-08,3;CL:0002320,2.25e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.71e-28;42!CL:0000377;1.02e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.65e-13!80;UBERON:0001474!2.39e-11!86;UBERON:0004765!4.18e-10!101;UBERON:0001434!4.18e-10!101;UBERON:0002390!4.61e-10!102;UBERON:0003061!4.61e-10!102;UBERON:0002193!1.03e-09!112;UBERON:0002405!9.30e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!2.65e-13!80;UBERON:0001474!2.39e-11!86;UBERON:0004765!4.18e-10!101;UBERON:0001434!4.18e-10!101;UBERON:0002390!4.61e-10!102;UBERON:0003061!4.61e-10!102;UBERON:0002193!1.03e-09!112;UBERON:0002405!9.30e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.70e-08;3!UBERON:0002031;6.70e-08;3!UBERON:0002190;7.80e-08;3!UBERON:0002072;1.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-18,76;UBERON:0001474,1.24e-16,82;UBERON:0002390,3.11e-16,98;UBERON:0003061,3.11e-16,98;UBERON:0002193,3.54e-16,108;UBERON:0002405,4.00e-16,93;UBERON:0004765,1.86e-14,90;UBERON:0001434,2.64e-13,100;UBERON:0004815,7.20e-08,3;UBERON:0002031,7.20e-08,3;UBERON:0002190,8.28e-08,3;UBERON:0002384,9.72e-08,371;UBERON:0002072,1.67e-07,5;UBERON:0003081,3.29e-07,203 | |||
|phase1_expression=0.181678379270557,7.06531728840244,0.422863212287913,2.00146596706261,10.2801051718276,0,12.6649939084155,1.26343974685366,6.7908263331958,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.96682138424452,1.15148819429164,1.23852898652861,4.59710612239464,3.0120591877825,7.76483421350254,0,0,0,4.43196326825502,6.61796676651468,11.0675544065084,0,0,0,0.581592955118259,0,0.242584061187816,4.64858073811369,4.52284676824008,4.02618282163635,5.75384784644301,5.37937483711111,5.20260905754887,12.4108445065183,16.7826017731795,14.8969135253776,3.9530891303947,2.72906150057846,3.82029923556644,28.4658019904939,10.5906578935111,24.9341479061626,0.329851300186716,0.598390972864896,0.426224750532694,10.447532590629,11.9150897185139,19.3074897188628,1.00499466102697,4.69334626578181,3.25783267057675,6.05399502633369,10.6800514436394,9.49387162322653,0.633765858935825,0.212604299965044,0,0.336985893439485,1.35159203557356,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,23.2668158488995,0.872188104285069,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,1.82032272387605,3.59309070908119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.966304265816484,0.545492241181669,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91413608338813,0,0,0.245976877086227,0,2.30475599358114,0,0.100528972411631,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0.335964256397719,0.992425680696705,0.268675568108545,0.290633938513962,0.766765358330422,0,0,0.414656231081544,0,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,35.2033301255176,47.865833472644,16.5766205374414,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0.413536052245775,6.47142602455851,1.921096040462,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0,0,0,0.116210378459959,0,3.40860999515584,2.20994373446151,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,1.19065593693561,0,0,0,0,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.178064071293475,4.29740779938543,1.72971060628596,0,0.50578890427775,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,2.53329162357197,0.987884678879706,0,0,2.98288549449087,3.35151137767894,9.80018863751903,0.0941438007767792,1.72202149068492,6.73885902670502,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,2.47205811340139,0,0.597743964753209,0.276283915531148,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,9.57932369387759,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0.14405479798815,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,1.60412296808179,1.43574604915363,0.399358000997982,1.28767814440971,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,0,0.0607495566580247,0,0.236417121897595,0,0,0,0.191915197319445,0,1.32418394073086,0,0,0,0,0,0,0,0.339936274560377,0.293104467356165,0,0,0,0,0,0.427149650270779,0.314408610199332,0.828478110694391,0.496166021811951,0,0,0,4.35214242695579,5.5151776684994,3.36980134439808,5.57383472206668,0,0,0,0,0.573409195690071,0,0,0,0,0,0,1.88212655758537,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0,0,0.686520205190771,0.151230923763239,0,0,0.318593534327405,0.449803112163605,0,0,0.265841714557995,0,0,0,0.406870733204662,2.36403256963327,1.28892668450986,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0.39997479170986,0,0.172214979660816,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0,0.225630985047772,1.0085253435176,0,0,0,0.147856086217045,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0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| ||
|short_description=p@chr1:209849359..209849383,+ | |short_description=p@chr1:209849359..209849383,+ | ||
}} | }} |
Latest revision as of 03:24, 28 July 2015
Short description: | p@chr1:209849359..209849383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209849359..209849383, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-18 | 76 |
bone element | 1.24e-16 | 82 |
hematopoietic system | 3.11e-16 | 98 |
blood island | 3.11e-16 | 98 |
hemolymphoid system | 3.54e-16 | 108 |
immune system | 4.00e-16 | 93 |
skeletal element | 1.86e-14 | 90 |
skeletal system | 2.64e-13 | 100 |
lower respiratory tract epithelium | 7.20e-08 | 3 |
epithelium of bronchus | 7.20e-08 | 3 |
subcutaneous adipose tissue | 8.28e-08 | 3 |
connective tissue | 9.72e-08 | 371 |
hypodermis | 1.67e-07 | 5 |
lateral plate mesoderm | 3.29e-07 | 203 |