FFCP PHASE1:Hg19::chr12:68845383..68845401,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:68845383..68845401,-
|short_description=p2@ENST00000542875
|description=CAGE_peak_2_at_ENST00000542875_5end
|association_with_transcript=41bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_ENST00000542875_5end | |||
|cluster_id=chr12:68845383..68845401,- | |||
|description=CAGE_peak_2_at_ENST00000542875_5end | |||
|id=chr12:68845383..68845401,- | |||
|ontology_enrichment_celltype=CL:0002087!3.30e-38!119;CL:0000738!3.10e-36!140;CL:0000542!5.18e-35!53;CL:0000051!5.18e-35!53;CL:0000838!6.63e-34!52;CL:0002031!3.30e-30!124;CL:0000037!1.28e-25!172;CL:0000566!1.28e-25!172;CL:0000988!5.24e-25!182;CL:0002032!3.50e-24!165;CL:0000837!3.50e-24!165;CL:0000945!3.26e-23!24;CL:0000826!3.26e-23!24;CL:0000236!2.92e-17!14;CL:0000625!1.62e-14!11;CL:0000791!4.94e-11!18;CL:0000789!4.94e-11!18;CL:0002420!4.94e-11!18;CL:0002419!4.94e-11!18;CL:0000790!4.94e-11!18;CL:0000084!1.21e-09!25;CL:0000827!1.21e-09!25;CL:0002057!6.47e-09!42;CL:0000860!5.52e-08!45;CL:0002393!5.70e-08!9;CL:0002397!5.70e-08!9;CL:0000766!6.96e-07!76;CL:0002194!7.75e-07!63;CL:0000576!7.75e-07!63;CL:0000040!7.75e-07!63;CL:0000559!7.75e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.86e-45;24!CL:0000236;1.51e-40;13!CL:0000542;1.40e-25;53!CL:0000625;1.17e-18;11!CL:0000767;1.02e-13;3!CL:0000791;4.89e-11;18!CL:0000789;4.89e-11;18!CL:0002419;4.89e-11;18!CL:0002087;1.93e-09;104!CL:0000084;1.10e-07;25!CL:0000875;4.26e-07;3!CL:0002396;4.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.52e-45,24;CL:0000826,4.52e-45,24;CL:0000236,1.66e-44,14;CL:0000838,2.13e-44,52;CL:0000542,1.89e-43,53;CL:0000051,1.89e-43,53;CL:0000738,2.56e-24,136;CL:0002087,7.72e-24,115;CL:0002031,7.79e-21,120;CL:0000625,5.69e-19,11;CL:0000037,2.31e-18,168;CL:0002032,4.97e-18,161;CL:0000837,4.97e-18,161;CL:0000988,4.49e-17,177;CL:0000767,1.68e-13,3;CL:0000791,3.20e-11,18;CL:0000789,3.20e-11,18;CL:0002420,3.20e-11,18;CL:0002419,3.20e-11,18;CL:0000790,3.20e-11,18;CL:0000084,8.23e-08,25;CL:0000827,8.23e-08,25;CL:0000875,4.73e-07,3;CL:0002396,4.73e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.40e-25;53!CL:0000790;4.89e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.47e-16!15;UBERON:0000179!3.47e-16!15;UBERON:0000463!3.47e-16!15;UBERON:0002390!3.32e-15!102;UBERON:0003061!3.32e-15!102;UBERON:0002193!8.92e-15!112;UBERON:0007023!3.55e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.73e-13;15!UBERON:0000179;3.73e-13;15!UBERON:0000463;3.73e-13;15!UBERON:0002390;9.61e-11;32!UBERON:0002193;5.85e-10;42!UBERON:0002106;8.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.24e-13,15;UBERON:0000179,4.24e-13,15;UBERON:0000463,4.24e-13,15;UBERON:0002106,7.17e-07,3;UBERON:0004854,7.17e-07,3;UBERON:0009034,7.17e-07,3;UBERON:0002095,7.17e-07,3;UBERON:0004782,7.17e-07,3;UBERON:0003281,7.17e-07,3;UBERON:0009664,7.17e-07,3;UBERON:0002296,7.17e-07,3;UBERON:0005602,7.17e-07,3;UBERON:0001179,7.17e-07,3;UBERON:0006293,7.17e-07,3 | |||
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| ||
|short_description=p2@ENST00000542875 | |||
}} | }} |
Latest revision as of 11:44, 24 July 2015
Short description: | p2@ENST00000542875 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000542875_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000542875_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.52e-45 | 24 |
pro-B cell | 4.52e-45 | 24 |
B cell | 1.66e-44 | 14 |
lymphoid lineage restricted progenitor cell | 2.13e-44 | 52 |
lymphocyte | 1.89e-43 | 53 |
common lymphoid progenitor | 1.89e-43 | 53 |
leukocyte | 2.56e-24 | 136 |
nongranular leukocyte | 7.72e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.79e-21 | 120 |
CD8-positive, alpha-beta T cell | 5.69e-19 | 11 |
hematopoietic stem cell | 2.31e-18 | 168 |
hematopoietic oligopotent progenitor cell | 4.97e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.97e-18 | 161 |
hematopoietic cell | 4.49e-17 | 177 |
basophil | 1.68e-13 | 3 |
mature alpha-beta T cell | 3.20e-11 | 18 |
alpha-beta T cell | 3.20e-11 | 18 |
immature T cell | 3.20e-11 | 18 |
mature T cell | 3.20e-11 | 18 |
immature alpha-beta T cell | 3.20e-11 | 18 |
T cell | 8.23e-08 | 25 |
pro-T cell | 8.23e-08 | 25 |
non-classical monocyte | 4.73e-07 | 3 |
CD14-low, CD16-positive monocyte | 4.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.24e-13 | 15 |
haemolymphatic fluid | 4.24e-13 | 15 |
organism substance | 4.24e-13 | 15 |
spleen | 7.17e-07 | 3 |
gastrointestinal system mesentery | 7.17e-07 | 3 |
stomach region | 7.17e-07 | 3 |
mesentery | 7.17e-07 | 3 |
gastrointestinal system serosa | 7.17e-07 | 3 |
mesentery of stomach | 7.17e-07 | 3 |
gut mesentery | 7.17e-07 | 3 |
dorsal mesentery | 7.17e-07 | 3 |
dorsal mesogastrium | 7.17e-07 | 3 |
peritoneal cavity | 7.17e-07 | 3 |
spleen primordium | 7.17e-07 | 3 |