FFCP PHASE1:Hg19::chr1:241577036..241577064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:241577036..241577064,+ | |||
|coexpression_cluster_id=C1853 | |||
|description=CAGE_peak_at_chr1:241577036..241577064,+ | |description=CAGE_peak_at_chr1:241577036..241577064,+ | ||
|id=chr1:241577036..241577064,+ | |id=chr1:241577036..241577064,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.46e-30!75;CL:0000055!2.65e-19!180;CL:0002620!1.80e-13!23;CL:0002551!2.30e-11!6;CL:0002556!8.73e-11!6;CL:0002552!4.83e-10!5;CL:0002334!3.05e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.46e-30!75;CL:0000055!2.65e-19!180;CL:0002620!1.80e-13!23;CL:0002551!2.30e-11!6;CL:0002556!8.73e-11!6;CL:0002552!4.83e-10!5;CL:0002334!3.05e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002551;2.28e-20;6!CL:0002552;1.35e-16;5!CL:0002556;1.13e-13;6!CL:0000057;7.04e-11;73!CL:0002363;1.68e-10;2!CL:0002620;1.92e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.48e-21,76;CL:0002551,2.63e-20,6;CL:0002552,1.38e-16,5;CL:0002556,1.17e-13,6;CL:0002363,2.47e-10,2;CL:0000008,2.47e-10,2;CL:0002620,2.10e-09,23 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.97e-16;3!CL:0000008;1.68e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;2.49e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,2.12e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.34e-13!95;UBERON:0001758!8.73e-11!6;UBERON:0003672!8.73e-11!6;UBERON:0000475!6.73e-08!365;UBERON:0000914!1.73e-07!83;UBERON:0002329!1.73e-07!83;UBERON:0003077!1.73e-07!83;UBERON:0003059!1.73e-07!83;UBERON:0007282!1.73e-07!83;UBERON:0009618!1.73e-07!83;UBERON:0007285!1.73e-07!83;UBERON:0002067!3.28e-07!9;UBERON:0004016!3.28e-07!9;UBERON:0010083!3.28e-07!9;UBERON:0002097!3.51e-07!40;UBERON:0002199!6.65e-07!45;UBERON:0002416!6.65e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.13e-13;6!UBERON:0003672;1.13e-13;6!UBERON:0002067;1.67e-13;9!UBERON:0003129;9.91e-12;7!UBERON:0003566;1.68e-10;2!UBERON:0001777;1.68e-10;2!UBERON:0001828;2.11e-10;8!UBERON:0000165;2.53e-10;28!UBERON:0002037;2.42e-08;6!UBERON:0011137;1.76e-07;11!UBERON:0010323;1.76e-07;11!UBERON:0001444;2.53e-07;48!UBERON:0003102;4.75e-07;50!UBERON:0004733;6.19e-07;12!UBERON:0002028;6.19e-07;12!UBERON:0002199;6.29e-07;46!UBERON:0002416;6.29e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.69e-15,99;UBERON:0001758,1.17e-13,6;UBERON:0003672,1.17e-13,6;UBERON:0002067,1.84e-13,9;UBERON:0004016,1.84e-13,9;UBERON:0010083,1.84e-13,9;UBERON:0003129,1.02e-11,7;UBERON:0001828,2.14e-10,8;UBERON:0003566,2.47e-10,2;UBERON:0001777,2.47e-10,2;UBERON:0000165,6.50e-10,29;UBERON:0000930,6.50e-10,29;UBERON:0002199,1.46e-08,46;UBERON:0002416,1.46e-08,46;UBERON:0002037,2.42e-08,6;UBERON:0006215,2.42e-08,6;UBERON:0001444,2.87e-08,49;UBERON:0002097,5.34e-08,41;UBERON:0010323,1.80e-07,11;UBERON:0000033,5.24e-07,56;UBERON:0004733,6.05e-07,12;UBERON:0002028,6.05e-07,12;UBERON:0007277,6.05e-07,12 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,5.4666914686485,0.633152558322899,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,5.38939293217732,2.49728061464256,2.2818872861778,4.63290909710583,0.587172493218824,5.01806127541208,5.33713065468544,38.176830024665,14.4944494427886,27.8979609174567,2.37600571456411,0.741800787835671,0,0,5.89176398839232,2.12701483782339,41.5596173226274,0.438977620880838,7.04921930337745,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,2.83404594050192,0.930584281657949,0,0,0,0.0920498986422993,0.80823028409406,0.355009592516614,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56131627434455,1.03993478527958,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,0.66004457238855,0.258543431515556,0,1.690605505112,0.797814349754612,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,2.85273810081437,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,10.3488813502354,1.41932173530541,0.937131319941706,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0,0.511707249066704,0.321707842287215,0,1.07946785661859,0,0.164254312027618,1.55776328755086,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,1.92971201478343,0,0,0.255679882248303,0,0,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.511343412510774,0,8.3980688668688,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,24.4130778107333,43.1259113731776,9.16197618755997,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22313785466253,1.255234155748,0,0,0,0,0,2.14882720709979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66229723688445,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0,0,0.955780602982214,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,5.04739592914604,0,0,0,0,0,0,1.61179956973339,0,0,0.353378291891762,0,0,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0.135939465953663,0,0,0.333694205676207,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,5.4666914686485,0.633152558322899,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0,0,5.38939293217732,2.49728061464256,2.2818872861778,4.63290909710583,0.587172493218824,5.01806127541208,5.33713065468544,38.176830024665,14.4944494427886,27.8979609174567,2.37600571456411,0.741800787835671,0,0,5.89176398839232,2.12701483782339,41.5596173226274,0.438977620880838,7.04921930337745,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,2.83404594050192,0.930584281657949,0,0,0,0.0920498986422993,0.80823028409406,0.355009592516614,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56131627434455,1.03993478527958,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,0.66004457238855,0.258543431515556,0,1.690605505112,0.797814349754612,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,2.85273810081437,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,10.3488813502354,1.41932173530541,0.937131319941706,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0,0.511707249066704,0.321707842287215,0,1.07946785661859,0,0.164254312027618,1.55776328755086,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,1.92971201478343,0,0,0.255679882248303,0,0,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.511343412510774,0,8.3980688668688,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,24.4130778107333,43.1259113731776,9.16197618755997,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22313785466253,1.255234155748,0,0,0,0,0,2.14882720709979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66229723688445,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0,0,0.955780602982214,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,5.04739592914604,0,0,0,0,0,0,1.61179956973339,0,0,0.353378291891762,0,0,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0.135939465953663,0,0,0.333694205676207,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:241577036..241577064,+ | |short_description=p@chr1:241577036..241577064,+ | ||
}} | }} |
Latest revision as of 05:43, 28 July 2015
Short description: | p@chr1:241577036..241577064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:241577036..241577064, + |
Coexpression cluster: | C1853_Fibroblast_cerebellum_Olfactory_basal_mesodermal_Keratocytes_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.48e-21 | 76 |
fibroblast of dermis | 2.63e-20 | 6 |
fibroblast of gingiva | 1.38e-16 | 5 |
fibroblast of periodontium | 1.17e-13 | 6 |
keratocyte | 2.47e-10 | 2 |
migratory cranial neural crest cell | 2.47e-10 | 2 |
skin fibroblast | 2.10e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.69e-15 | 99 |
periodontium | 1.17e-13 | 6 |
dentition | 1.17e-13 | 6 |
dermis | 1.84e-13 | 9 |
dermatome | 1.84e-13 | 9 |
future dermis | 1.84e-13 | 9 |
skull | 1.02e-11 | 7 |
gingiva | 2.14e-10 | 8 |
head connective tissue | 2.47e-10 | 2 |
substantia propria of cornea | 2.47e-10 | 2 |
mouth | 6.50e-10 | 29 |
stomodeum | 6.50e-10 | 29 |
integument | 1.46e-08 | 46 |
integumental system | 1.46e-08 | 46 |
cerebellum | 2.42e-08 | 6 |
rhombic lip | 2.42e-08 | 6 |
subdivision of head | 2.87e-08 | 49 |
skin of body | 5.34e-08 | 41 |
cranial skeletal system | 1.80e-07 | 11 |
head | 5.24e-07 | 56 |
segmental subdivision of hindbrain | 6.05e-07 | 12 |
hindbrain | 6.05e-07 | 12 |
presumptive hindbrain | 6.05e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 2.12e-07 | 3 |