FFCP PHASE1:Hg19::chr5:73071714..73071730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:73071714..73071730,+ | |||
|coexpression_cluster_id=C4462 | |||
|description=CAGE_peak_at_chr5:73071714..73071730,+ | |description=CAGE_peak_at_chr5:73071714..73071730,+ | ||
|id=chr5:73071714..73071730,+ | |id=chr5:73071714..73071730,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.70e-24!42;CL:0000860!7.26e-24!45;CL:0000839!1.30e-18!70;CL:0002009!1.88e-18!65;CL:0000557!1.93e-18!71;CL:0000763!1.05e-17!112;CL:0000049!1.05e-17!112;CL:0000766!2.72e-17!76;CL:0002194!4.82e-17!63;CL:0000576!4.82e-17!63;CL:0000040!4.82e-17!63;CL:0000559!4.82e-17!63;CL:0002032!2.70e-13!165;CL:0000837!2.70e-13!165;CL:0002031!3.06e-13!124;CL:0000738!3.69e-12!140;CL:0000037!1.01e-11!172;CL:0000566!1.01e-11!172;CL:0000988!4.19e-10!182;CL:0002087!7.62e-10!119 | |ontology_enrichment_celltype=CL:0002057!1.70e-24!42;CL:0000860!7.26e-24!45;CL:0000839!1.30e-18!70;CL:0002009!1.88e-18!65;CL:0000557!1.93e-18!71;CL:0000763!1.05e-17!112;CL:0000049!1.05e-17!112;CL:0000766!2.72e-17!76;CL:0002194!4.82e-17!63;CL:0000576!4.82e-17!63;CL:0000040!4.82e-17!63;CL:0000559!4.82e-17!63;CL:0002032!2.70e-13!165;CL:0000837!2.70e-13!165;CL:0002031!3.06e-13!124;CL:0000738!3.69e-12!140;CL:0000037!1.01e-11!172;CL:0000566!1.01e-11!172;CL:0000988!4.19e-10!182;CL:0002087!7.62e-10!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.26e-33;33!CL:0002057;9.26e-33;33!CL:0000473;3.12e-27;39!CL:0000234;3.12e-27;39!CL:0000576;5.91e-17;48!CL:0000766;7.62e-13;69!CL:0000197;1.44e-09;6!CL:0000098;1.44e-09;6!CL:0002167;1.44e-09;6!CL:0000453;4.64e-08;5!CL:0000763;2.59e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.65e-33,48;CL:0000234,2.65e-33,48;CL:0000860,4.88e-32,42;CL:0002057,4.88e-32,42;CL:0002009,9.47e-27,61;CL:0000557,2.47e-26,67;CL:0000839,2.58e-26,66;CL:0002194,2.39e-24,59;CL:0000576,2.39e-24,59;CL:0000040,2.39e-24,59;CL:0000559,2.39e-24,59;CL:0000763,3.55e-22,108;CL:0000049,3.55e-22,108;CL:0000766,7.71e-22,72;CL:0002031,7.46e-12,120;CL:0002032,5.14e-11,161;CL:0000837,5.14e-11,161;CL:0000738,1.53e-10,136;CL:0000037,4.99e-10,168;CL:0000197,1.07e-09,6;CL:0000098,1.07e-09,6;CL:0002167,1.07e-09,6;CL:0000988,6.84e-09,177;CL:0002087,2.44e-08,115;CL:0000453,5.31e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-23;42!CL:0000049;3.16e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.91e-16!80;UBERON:0001474!2.73e-14!86;UBERON:0004765!3.89e-12!101;UBERON:0001434!3.89e-12!101;UBERON:0002390!3.63e-10!102;UBERON:0003061!3.63e-10!102;UBERON:0002405!1.18e-09!115;UBERON:0002193!4.13e-09!112;UBERON:0001737!1.68e-07!9;UBERON:0001049!2.71e-07!57;UBERON:0005068!2.71e-07!57;UBERON:0006241!2.71e-07!57;UBERON:0007135!2.71e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.38e-12;9!UBERON:0001557;3.38e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.23e-23,76;UBERON:0001474,1.22e-20,82;UBERON:0004765,4.55e-20,90;UBERON:0002405,3.01e-19,93;UBERON:0001434,7.76e-17,100;UBERON:0002390,2.30e-15,98;UBERON:0003061,2.30e-15,98;UBERON:0002193,6.87e-15,108;UBERON:0001737,4.14e-12,9;UBERON:0002204,3.23e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,6.72325146451775,5.42425075221579,4.38186054232424,3.41552959153355,0,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,4.21654892460738,3.02300754951048,1.94067248950253,6.27558399645349,5.34518254428373,1.85823822537062,6.61692502340946,3.84241059793651,0.47296445977717,4.13694816883942,3.87290810150296,2.70852973188684,6.40023954444856,4.91231070104122,1.57306439111559,4.89734227793444,3.20929027076094,3.83602275479425,0.659702600373432,4.78712778291916,0.852449501065388,9.57690487474327,5.6738522469114,4.35975574296902,10.80369260604,14.6015217157656,1.08594422352558,6.05399502633369,3.31449872388808,1.89877432464531,0.845021145247767,2.55125159958052,1.67726916406701,1.57260083605093,1.65194582125657,1.44653028027372,0.285012743741249,1.59133341759272,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,0,0,0,0.587237189370939,0,0,0,1.84368859342554,0,0,0,0.668745981562712,0.977766799900771,0.473447805734733,3.89653456815823,1.22551502573691,1.17842362989935,0.886135578334485,1.35401931882508,2.81800903396485,2.08094956095805,2.63100647365882,0.276350017785848,1.15921234294021,2.22429844743091,1.60524496853828,0,0.906474741580529,0,0,3.03623630423403,0.318565414324097,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.511450247374121,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8270012503362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30802127189071,2.91981887260664,0,0,0,0,0,3.19428360107579,3.20310911148393,1.68707720918437,2.64705534557745,2.61455332910887,2.37270619111097,5.52808363456674,2.15843611637881,2.30848294167834,0,0,0,0,0,0,0,0,0,4.97546649865724,0,0,0,0,0,0,0,24.2294546397911,0.587043471179108,0,4.1668696131895,10.6542325251375,0,0,0,0,0,0,3.52762469217605,2.41017665312057,0,0,0,0,4.31437326664808,0,0.720599767084807,1.2624243342638,2.92090313743978,0,0,0,0,4.20480280981484,7.14566081576446,0,0,0,0,0,4.22651376278,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,3.64871341923571,7.03159928004977,18.9750545534728,0,0,2.85273810081437,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,9.56908127479745,1.49801404789436,0,0,0,0.500170521059677,0,8.11086359970148,7.85087550707512,5.83498935625558,5.62278791965023,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,1.5686127061494,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,5.35973392477253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717056761020258,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.0711418433484141,0,0.399158742865633,0.957526850661834,0.211673582723883,6.81706074576566,0,0,0,7.51903431270201,5.2480451118497,0.1605880751037,0,0,0,0,0,0,0,0,0,6.49093628342359,0,0,0,0,0.121360521749513,0.222886768554957,0,1.43246690842614,0.296964680832639,0,5.96488588659779,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,8.85741385813839,0.60298219312704,4.5774520895125,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,1.27600463892768,1.00757352742049,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.164230914106418,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,16.2113477951643,0.136905378891993,0,0,0,0,1.83328339209347,0.717873024576814,0.399358000997982,0.429226048136571,0.446342914883745,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0.169346664131569,27.8330391433256,0.136203406111576,7.87690427478594,0.137539436597234,0,4.49947783103001,10.8332273638113,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0,0,0.246277562248017,0.170388021785422,0,0,0,21.2024048432943,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,2.0055191521816,1.22538230705385,0,0,24.8099090390756,21.7206751525494,0.751145584238999,13.7618206965617,0.332787154610557,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,3.55924488638614,0,0,0.15543720058278,0,0,1.34940933649081,0,4.97647449409027,0,3.65221543268214,0,12.5665720015702,0,0,0,2.32016879939247,3.58286299828754,0,2.74716564146234,1.34699795506368,0,0,0,0.260994291965212,0,0,0.244736704506468,0.358177682162975,0,0,0,0,0,0,0,0,0.138258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| ||
|short_description=p@chr5:73071714..73071730,+ | |short_description=p@chr5:73071714..73071730,+ | ||
}} | }} |
Latest revision as of 16:14, 30 July 2015
Short description: | p@chr5:73071714..73071730, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:73071714..73071730, + |
Coexpression cluster: | C4462_skeletal_hippocampus_medulla_medial_parietal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.65e-33 | 48 |
phagocyte | 2.65e-33 | 48 |
classical monocyte | 4.88e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-32 | 42 |
macrophage dendritic cell progenitor | 9.47e-27 | 61 |
granulocyte monocyte progenitor cell | 2.47e-26 | 67 |
myeloid lineage restricted progenitor cell | 2.58e-26 | 66 |
monopoietic cell | 2.39e-24 | 59 |
monocyte | 2.39e-24 | 59 |
monoblast | 2.39e-24 | 59 |
promonocyte | 2.39e-24 | 59 |
myeloid cell | 3.55e-22 | 108 |
common myeloid progenitor | 3.55e-22 | 108 |
myeloid leukocyte | 7.71e-22 | 72 |
hematopoietic lineage restricted progenitor cell | 7.46e-12 | 120 |
hematopoietic oligopotent progenitor cell | 5.14e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.14e-11 | 161 |
leukocyte | 1.53e-10 | 136 |
hematopoietic stem cell | 4.99e-10 | 168 |
receptor cell | 1.07e-09 | 6 |
sensory epithelial cell | 1.07e-09 | 6 |
olfactory epithelial cell | 1.07e-09 | 6 |
hematopoietic cell | 6.84e-09 | 177 |
nongranular leukocyte | 2.44e-08 | 115 |
Langerhans cell | 5.31e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.23e-23 | 76 |
bone element | 1.22e-20 | 82 |
skeletal element | 4.55e-20 | 90 |
immune system | 3.01e-19 | 93 |
skeletal system | 7.76e-17 | 100 |
hematopoietic system | 2.30e-15 | 98 |
blood island | 2.30e-15 | 98 |
hemolymphoid system | 6.87e-15 | 108 |
larynx | 4.14e-12 | 9 |
musculoskeletal system | 3.23e-09 | 167 |