FFCP PHASE1:Hg19::chr1:50889155..50889173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63950 | |EntrezGene=63950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13908 | |HGNC=13908 | ||
|TSSclassifier=strong | |||
|UniProt=Q96SC8 | |UniProt=Q96SC8 | ||
|association_with_transcript=0bp_to_ENST00000404795_5end | |association_with_transcript=0bp_to_ENST00000404795_5end | ||
|cluster_id=chr1:50889155..50889173,- | |||
|description=CAGE_peak_2_at_DMRTA2_5end | |description=CAGE_peak_2_at_DMRTA2_5end | ||
|id=chr1:50889155..50889173,- | |id=chr1:50889155..50889173,- | ||
|ontology_enrichment_celltype=CL:0002076!4.71e-13!43;CL:0000223!2.94e-09!59;CL:0000068!1.16e-07!3;CL:0000069!1.16e-07!3;CL:0000307!1.16e-07!3;CL:0000377!1.16e-07!3;CL:0002368!2.79e-07!13 | |ontology_enrichment_celltype=CL:0002076!4.71e-13!43;CL:0000223!2.94e-09!59;CL:0000068!1.16e-07!3;CL:0000069!1.16e-07!3;CL:0000307!1.16e-07!3;CL:0000377!1.16e-07!3;CL:0002368!2.79e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000307;3.06e-17;3!CL:0000575;1.49e-12;2!CL:0002202;2.94e-10;9!CL:0002632;2.94e-10;9!CL:0000222;2.73e-07;1!CL:0002252;2.73e-07;1!CL:0002368;4.00e-07;13!CL:0002174;9.50e-07;1!CL:1001319;9.50e-07;1!CL:1000600;9.50e-07;1!CL:0000501;9.50e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.94e-17,3;CL:0000069,4.94e-17,3;CL:0000307,4.94e-17,3;CL:0000377,4.94e-17,3;CL:0000575,1.41e-12,2;CL:0002202,3.62e-10,9;CL:0002632,3.62e-10,9;CL:0002076,1.62e-09,42;CL:0002252,2.99e-07,1;CL:0002368,4.60e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;3.06e-17;3!UBERON:0000358;4.13e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!3.40e-09!14;DOID:4362!2.59e-07!5 | |ontology_enrichment_disease=DOID:1749!3.40e-09!14;DOID:4362!2.59e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.77e-14;14!DOID:0050619;9.50e-07;1!DOID:178;9.50e-07;1!DOID:326;9.50e-07;1!DOID:3978;9.50e-07;1!DOID:3394;9.50e-07;1!DOID:5844;9.50e-07;1!DOID:1357;9.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.98e-14,14;DOID:0050619,6.76e-07,1;DOID:1357,6.76e-07,1;DOID:162,7.78e-07,235;DOID:178,8.98e-07,1;DOID:326,8.98e-07,1;DOID:3978,8.98e-07,1;DOID:3394,8.98e-07,1;DOID:5844,8.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005178!2.00e-09!34;UBERON:0002224!2.00e-09!34;UBERON:0005181!4.69e-09!35;UBERON:0005743!6.30e-09!86;UBERON:0001017!9.05e-09!82;UBERON:0000073!2.41e-08!94;UBERON:0001016!2.41e-08!94;UBERON:0003126!7.31e-08!7;UBERON:0001005!7.31e-08!7;UBERON:0007196!5.36e-07!14;UBERON:0001558!5.36e-07!14 | |ontology_enrichment_uberon=UBERON:0005178!2.00e-09!34;UBERON:0002224!2.00e-09!34;UBERON:0005181!4.69e-09!35;UBERON:0005743!6.30e-09!86;UBERON:0001017!9.05e-09!82;UBERON:0000073!2.41e-08!94;UBERON:0001016!2.41e-08!94;UBERON:0003126!7.31e-08!7;UBERON:0001005!7.31e-08!7;UBERON:0007196!5.36e-07!14;UBERON:0001558!5.36e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003126;8.19e-13;7!UBERON:0001005;8.19e-13;7!UBERON:0005178;7.23e-11;34!UBERON:0002224;7.23e-11;34!UBERON:0005181;1.60e-09;35!UBERON:0007196;3.56e-09;15!UBERON:0001558;3.56e-09;15!UBERON:0000072;2.74e-08;37!UBERON:0004645;9.50e-07;1!UBERON:0001764;9.50e-07;1!UBERON:0001825;9.50e-07;1!UBERON:0001256;9.50e-07;1!UBERON:0001259;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.29e-12,7;UBERON:0001005,1.29e-12,7;UBERON:0005178,7.85e-12,34;UBERON:0002224,7.85e-12,34;UBERON:0005181,1.89e-11,35;UBERON:0007196,4.61e-09,15;UBERON:0001558,4.61e-09,15;UBERON:0008947,3.46e-08,38;UBERON:0003258,3.46e-08,38;UBERON:0000915,3.16e-07,52;UBERON:0001764,6.76e-07,1;UBERON:0001825,6.76e-07,1 | |||
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| ||
|short_description=p2@DMRTA2 | |short_description=p2@DMRTA2 | ||
}} | }} |
Latest revision as of 10:57, 18 September 2015
Short description: | p2@DMRTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DMRTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000404795_5end |
EntrezGene: | DMRTA2 |
HGNC: | 13908 |
UniProt: | Q96SC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.94e-17 | 3 |
branched duct epithelial cell | 4.94e-17 | 3 |
tracheal epithelial cell | 4.94e-17 | 3 |
tracheoblast | 4.94e-17 | 3 |
corneal epithelial cell | 1.41e-12 | 2 |
epithelial cell of tracheobronchial tree | 3.62e-10 | 9 |
epithelial cell of lower respiratory tract | 3.62e-10 | 9 |
endo-epithelial cell | 1.62e-09 | 42 |
epithelial cell of esophagus | 2.99e-07 | 1 |
respiratory epithelial cell | 4.60e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.29e-12 | 7 |
respiratory airway | 1.29e-12 | 7 |
thoracic cavity element | 7.85e-12 | 34 |
thoracic cavity | 7.85e-12 | 34 |
thoracic segment organ | 1.89e-11 | 35 |
tracheobronchial tree | 4.61e-09 | 15 |
lower respiratory tract | 4.61e-09 | 15 |
respiratory primordium | 3.46e-08 | 38 |
endoderm of foregut | 3.46e-08 | 38 |
thoracic segment of trunk | 3.16e-07 | 52 |
maxillary sinus | 6.76e-07 | 1 |
paranasal sinus | 6.76e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.98e-14 | 14 |
paranasal sinus cancer | 6.76e-07 | 1 |
maxillary sinus cancer | 6.76e-07 | 1 |
cancer | 7.78e-07 | 235 |
vascular disease | 8.98e-07 | 1 |
ischemia | 8.98e-07 | 1 |
extrinsic cardiomyopathy | 8.98e-07 | 1 |
myocardial ischemia | 8.98e-07 | 1 |
myocardial infarction | 8.98e-07 | 1 |